FFCP PHASE1:Hg19::chr11:118186261..118186272,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:118186261..118186272,+ to FFCP PHASE1:Hg19::chr11:118186261..118186272,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:118186261..118186272,+ | |||
|coexpression_cluster_id=C1132 | |||
|description=CAGE_peak_at_chr11:118186261..118186272,+ | |||
|id=chr11:118186261..118186272,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.62e-43!25;CL:0000827!2.62e-43!25;CL:0000791!2.52e-39!18;CL:0000789!2.52e-39!18;CL:0002420!2.52e-39!18;CL:0002419!2.52e-39!18;CL:0000790!2.52e-39!18;CL:0000838!3.70e-27!52;CL:0000542!1.60e-26!53;CL:0000051!1.60e-26!53;CL:0000625!2.19e-26!11;CL:0000738!2.01e-12!140;CL:0002087!2.89e-12!119;CL:0000624!3.44e-12!6;CL:0000623!2.47e-10!3;CL:0000825!2.47e-10!3;CL:0000842!1.81e-09!3;CL:0000037!9.80e-09!172;CL:0000566!9.80e-09!172;CL:0002031!1.35e-08!124;CL:0000988!7.27e-08!182;CL:0000224!3.38e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.34e-18;25!CL:0000625;1.94e-17;11!CL:0000791;5.77e-15;18!CL:0000789;5.77e-15;18!CL:0002419;5.77e-15;18!CL:0000623;3.59e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.21e-18,25;CL:0000827,1.21e-18,25;CL:0000625,1.85e-17,11;CL:0000791,4.35e-15,18;CL:0000789,4.35e-15,18;CL:0002420,4.35e-15,18;CL:0002419,4.35e-15,18;CL:0000790,4.35e-15,18;CL:0000838,3.34e-13,52;CL:0000542,6.35e-13,53;CL:0000051,6.35e-13,53;CL:0000623,2.38e-11,3;CL:0000825,2.38e-11,3;CL:0000738,3.49e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;5.77e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.47e-11!15;UBERON:0000179!1.47e-11!15;UBERON:0000463!1.47e-11!15;UBERON:0002370!1.57e-07!4;UBERON:0005058!1.57e-07!4;UBERON:0009113!1.57e-07!4;UBERON:0003295!1.57e-07!4;UBERON:0005562!1.57e-07!4;UBERON:0004177!5.22e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.96505381374582,0.822405995998037,1.5046784585161,0.32592226663359,0.473447805734733,0,1.22551502573691,0.294605907474837,0.886135578334485,0.812411591295047,2.43373507478783,1.56071217071854,0.986627427622057,1.10540007114339,1.44901542867526,1.33457906845854,0,2.09071047609954,1.24640276967323,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0.752875595388864,1.53583933385302,1.24930726552346,0.473554504088034,0.821127996921047,1.41124720257313,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.985153801009636,1.94064817373566,1.28343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.952927101831156,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0,0.497992903438899,1.4348364545594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.48780113114433,0.931120714437869,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,1.96505381374582,0.822405995998037,1.5046784585161,0.32592226663359,0.473447805734733,0,1.22551502573691,0.294605907474837,0.886135578334485,0.812411591295047,2.43373507478783,1.56071217071854,0.986627427622057,1.10540007114339,1.44901542867526,1.33457906845854,0,2.09071047609954,1.24640276967323,0,0.34362744548263,0.506039384039006,0.318565414324097,0,0.950452044448374,0.752875595388864,1.53583933385302,1.24930726552346,0.473554504088034,0.821127996921047,1.41124720257313,2.67440195783507,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.985153801009636,1.94064817373566,1.28343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.952927101831156,0.411362273086194,1.29694662238543,0,0,0,0,0,0,0,0.497992903438899,1.4348364545594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,3.48780113114433,0.931120714437869,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr11:118186261..118186272,+ | |||
}} | }} |
Latest revision as of 18:45, 23 July 2015
Short description: | p@chr11:118186261..118186272, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118186261..118186272, + |
Coexpression cluster: | C1132_thymus_CD4_CD8_Natural_chronic_acute_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.21e-18 | 25 |
pro-T cell | 1.21e-18 | 25 |
CD8-positive, alpha-beta T cell | 1.85e-17 | 11 |
mature alpha-beta T cell | 4.35e-15 | 18 |
alpha-beta T cell | 4.35e-15 | 18 |
immature T cell | 4.35e-15 | 18 |
mature T cell | 4.35e-15 | 18 |
immature alpha-beta T cell | 4.35e-15 | 18 |
lymphoid lineage restricted progenitor cell | 3.34e-13 | 52 |
lymphocyte | 6.35e-13 | 53 |
common lymphoid progenitor | 6.35e-13 | 53 |
natural killer cell | 2.38e-11 | 3 |
pro-NK cell | 2.38e-11 | 3 |
leukocyte | 3.49e-07 | 136 |