FFCP PHASE1:Hg19::chr11:117073740..117073758,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:117073740..117073758,+ to FFCP PHASE1:Hg19::chr11:117073740..117073758,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6876 | |EntrezGene=6876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11553 | |HGNC=11553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-101bp_to_ENST00000529622_5end | |||
|cluster_id=chr11:117073740..117073758,+ | |||
|coexpression_cluster_id=C493 | |||
|description=CAGE_peak_3_at_TAGLN_5end | |||
|id=chr11:117073740..117073758,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.20e-22!180;CL:0000057!4.35e-12!75;CL:0000680!7.66e-12!57;CL:0000056!7.66e-12!57;CL:0000355!7.66e-12!57;CL:0000359!3.38e-11!32;CL:0000187!1.21e-10!54;CL:0000183!2.22e-10!59;CL:0000393!4.47e-10!60;CL:0000211!4.47e-10!60;CL:0000192!7.82e-10!42;CL:0000514!7.82e-10!42;CL:0002334!1.41e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.28e-11;32!CL:0002334;4.66e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-13,76;CL:0000359,1.42e-11,32;CL:0002334,6.16e-09,12;CL:0000192,3.97e-08,43;CL:0000514,3.97e-08,43;CL:0000680,6.33e-08,58;CL:0000056,6.33e-08,58;CL:0000355,6.33e-08,58;CL:0000136,3.34e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.95e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!3.88e-12!63;UBERON:0001015!3.88e-12!63;UBERON:0000383!3.88e-12!63;UBERON:0000914!5.23e-12!83;UBERON:0002329!5.23e-12!83;UBERON:0003077!5.23e-12!83;UBERON:0003059!5.23e-12!83;UBERON:0007282!5.23e-12!83;UBERON:0009618!5.23e-12!83;UBERON:0007285!5.23e-12!83;UBERON:0001134!1.96e-11!61;UBERON:0002036!1.96e-11!61;UBERON:0003082!1.96e-11!61;UBERON:0005256!6.70e-11!143;UBERON:0004872!1.40e-10!84;UBERON:0004290!1.03e-09!70;UBERON:0002100!1.71e-09!216;UBERON:0001637!7.03e-09!42;UBERON:0003509!7.03e-09!42;UBERON:0004572!7.03e-09!42;UBERON:0004573!2.89e-08!33;UBERON:0004571!2.89e-08!33;UBERON:0000486!5.12e-08!82;UBERON:0001981!6.71e-08!60;UBERON:0007500!6.71e-08!60;UBERON:0004537!6.71e-08!60;UBERON:0006965!6.71e-08!60;UBERON:0003914!1.15e-07!118;UBERON:0002049!4.01e-07!79;UBERON:0007798!4.01e-07!79;UBERON:0000475!8.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.59e-09;6!UBERON:0002358;7.59e-09;6!UBERON:0003684;7.59e-09;6!UBERON:0001178;7.59e-09;6!UBERON:0001637;2.06e-07;42!UBERON:0003509;2.06e-07;42!UBERON:0004572;2.06e-07;42!UBERON:0004573;4.52e-07;33!UBERON:0004571;4.52e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.16e-10,42;UBERON:0003509,2.16e-10,42;UBERON:0004572,2.16e-10,42;UBERON:0004872,5.04e-09,83;UBERON:0003688,9.95e-09,6;UBERON:0002358,9.95e-09,6;UBERON:0003684,9.95e-09,6;UBERON:0001178,9.95e-09,6;UBERON:0007500,1.46e-08,59;UBERON:0001981,1.46e-08,59;UBERON:0004537,1.46e-08,59;UBERON:0006965,1.46e-08,59;UBERON:0004573,2.62e-08,33;UBERON:0004571,2.62e-08,33;UBERON:0002385,4.78e-08,64;UBERON:0001015,4.78e-08,64;UBERON:0000383,4.78e-08,64;UBERON:0002049,6.37e-08,78;UBERON:0007798,6.37e-08,78;UBERON:0007524,1.11e-07,73;UBERON:0001134,1.11e-07,62;UBERON:0002036,1.11e-07,62;UBERON:0003082,1.11e-07,62;UBERON:0002329,2.59e-07,71;UBERON:0003059,2.59e-07,71;UBERON:0007282,2.59e-07,71;UBERON:0004290,2.59e-07,71;UBERON:0009618,2.59e-07,71;UBERON:0003077,4.09e-07,72;UBERON:0007285,4.09e-07,72;UBERON:0003914,4.82e-07,117;UBERON:0004535,6.14e-07,109;UBERON:0007503,9.95e-07,78 | |||
|phase1_expression=5.08699461957559,12.631930909568,5.3562673556469,17.0124607200322,11.1740273606822,21.8084631025092,10.1319951267324,0,0,1.47440361900905,4.18680700783456,0.436882744260345,0.791300934685361,0,1.65698687863958,22.1867298329086,6.62963980826375,6.57279081348636,5.36726078669558,0.123121058076788,0.204000691244253,1.25381888591235,0,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.02290049474824,0.722878304769133,3.00802746381534,0.289693037921647,0,0,1.41802225746102,5.98669373148923,1.14185221401064,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,4.96971951695318,2.15271869829786,1.05927344650575,1.72101972449288,0.354668382198357,6.16745360156538,2.1349799145941,2.22000793575444,0.311211035399766,0.269421344139376,1.14423332179421,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,2.37600571456411,5.68713937340681,0.910161361938026,0,0,0.125118519871964,0,1.75591048352335,7.96868269077451,2.70428506031874,1.02088964844019,0.89694817844431,1.06778694409284,1.48352330811693,0.300091096084402,1.75189299705346,2.57640540045629,1.48893485065272,0.337552664482532,3.41029518064195,0.504867548488229,1.10459878370759,0.969876340912871,2.84007674013291,4.43309232201617,1.01736355386293,0,0,0,0,0,0.348581828608555,0.414644220061482,0.504641701751257,0,4.69348596989448,2.57296375277154,0,0.928735856063958,0.721879481669586,0,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,2.80483547606892,1.2347220339942,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,1.17587489739202,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,1.16344544182,0,0.845302752556,3.45719551560332,5.2003718455683,0,0,0.799266537048298,0.714889968290738,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,8.71533458600294,3.499054691372,0,0,0,1.91699884393266,4.59447743336456,0,1.73737568001095,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0.24538298343828,0,0.271265023699736,3.74347550755453,7.49401752948079,2.83864347061082,2.45996971484698,4.51419149591578,11.3703752027992,3.10419213877515,0,3.68738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0.303127571446259,0,0,1.73675465473144,2.14846762603287,11.2264037773229,1.40953064181271,2.04682899626681,4.18220194973379,4.45254199334973,1.07946785661859,0.887808626565635,0.0821271560138091,1.03850885836724,1.85936605535935,0.362578348774867,1.00253235151642,0,0.229628896329213,0.182091168006717,0.655622074797121,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0.656029291399411,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.413509717453592,0,0.435050081742686,0.170453254832202,0.356128142586949,0.165284915360978,0.960950336825531,0,0,5.57814659156743,0.31481234683064,0,0,1.59691809095107,0.869932992075073,1.29726953372744,21.8981076715247,0,1.89827654831236,1.33441135746677,0.511795582622668,0,0,8.63443504219153,0,1.92175920815238,0.353437207037059,0.808729926293264,3.17020642346017,1.26377536871694,0,0.487426979262569,9.50851320810799,0.682499557039929,0.282810863907425,0,0,0.66343897524122,8.33056681982149,0,0,2.63783490051515,4.64735247149625,3.94373843545138,0.143411352204052,0.785992328104969,2.85336841185,0,0,0,0,0,0,0,2.17781969722645,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,2.98871982376605,0.552567831062295,0,0.102268682502155,0,12.7526230941341,0,0,0,2.26879832964947,0,2.22273980289274,0,0.0927680981618513,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,1.09692698576986,0,0,1.69290568708354,0.341826167541004,0,0,0,0,3.11431817566332,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,1.14994833854341,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,2.36750641709634,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,3.66926003308263,0.171986032471617,0,0,0,3.10364852762942,0.0882561266915003,0.451961481561065,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,5.15718529703949,0,1.95497680890578,1.3749625440701,0.717873024576814,0.199679000498991,0,0.446342914883745,0.0671834724867263,8.64719720501769,0,0,0,0.13480708770837,0,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0.5085370753095,10.3169924333205,9.50643640321395,5.87857248196936,0,0,0.17038802178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| 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| ||
|short_description=p3@TAGLN | |||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p3@TAGLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TAGLN_5end |
Coexpression cluster: | C493_Adipocyte_basal_Mesenchymal_Smooth_mesenchymal_Aortic_Multipotent |
Association with transcript: | -101bp_to_ENST00000529622_5end |
EntrezGene: | TAGLN |
HGNC: | 11553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-13 | 76 |
vascular associated smooth muscle cell | 1.42e-11 | 32 |
preadipocyte | 6.16e-09 | 12 |
smooth muscle cell | 3.97e-08 | 43 |
smooth muscle myoblast | 3.97e-08 | 43 |
muscle precursor cell | 6.33e-08 | 58 |
myoblast | 6.33e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.33e-08 | 58 |
fat cell | 3.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery | 2.16e-10 | 42 |
arterial blood vessel | 2.16e-10 | 42 |
arterial system | 2.16e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 5.04e-09 | 83 |
omentum | 9.95e-09 | 6 |
peritoneum | 9.95e-09 | 6 |
abdominal cavity | 9.95e-09 | 6 |
visceral peritoneum | 9.95e-09 | 6 |
epithelial tube open at both ends | 1.46e-08 | 59 |
blood vessel | 1.46e-08 | 59 |
blood vasculature | 1.46e-08 | 59 |
vascular cord | 1.46e-08 | 59 |
systemic artery | 2.62e-08 | 33 |
systemic arterial system | 2.62e-08 | 33 |
muscle tissue | 4.78e-08 | 64 |
musculature | 4.78e-08 | 64 |
musculature of body | 4.78e-08 | 64 |
vasculature | 6.37e-08 | 78 |
vascular system | 6.37e-08 | 78 |
dense mesenchyme tissue | 1.11e-07 | 73 |
skeletal muscle tissue | 1.11e-07 | 62 |
striated muscle tissue | 1.11e-07 | 62 |
myotome | 1.11e-07 | 62 |
somite | 2.59e-07 | 71 |
presomitic mesoderm | 2.59e-07 | 71 |
presumptive segmental plate | 2.59e-07 | 71 |
dermomyotome | 2.59e-07 | 71 |
trunk paraxial mesoderm | 2.59e-07 | 71 |
paraxial mesoderm | 4.09e-07 | 72 |
presumptive paraxial mesoderm | 4.09e-07 | 72 |
epithelial tube | 4.82e-07 | 117 |
cardiovascular system | 6.14e-07 | 109 |
epithelial vesicle | 9.95e-07 | 78 |