FFCP PHASE1:Hg19::chr11:104769199..104769211,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100506742 | |EntrezGene=100506742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19004 | |HGNC=19004 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBN7 | |UniProt=D6RBN7 | ||
|association_with_transcript=-39bp_to_ENST00000422698_5end | |||
|cluster_id=chr11:104769199..104769211,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_2_at_CASP12_5end | |||
|id=chr11:104769199..104769211,- | |||
|ontology_enrichment_celltype=CL:0005020!1.17e-13!6;CL:0002138!1.17e-13!6;CL:0005022!1.17e-13!6;CL:0002618!3.02e-07!3;CL:0002139!8.02e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002138;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,7.25e-08,6;CL:0002138,7.25e-08,6;CL:0005022,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.28e-53;3!CL:0005022;6.78e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-22!115;UBERON:0004733!1.34e-14!12;UBERON:0002028!1.34e-14!12;UBERON:0007277!1.34e-14!12;UBERON:0002680!8.53e-14!9;UBERON:0001895!8.53e-14!9;UBERON:0010092!8.53e-14!9;UBERON:0001049!1.77e-13!57;UBERON:0005068!1.77e-13!57;UBERON:0006241!1.77e-13!57;UBERON:0007135!1.77e-13!57;UBERON:0004732!1.99e-13!13;UBERON:0002616!6.28e-13!59;UBERON:0003076!1.50e-11!15;UBERON:0003057!1.50e-11!15;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0005743!1.71e-10!86;UBERON:0000955!1.84e-10!69;UBERON:0006238!1.84e-10!69;UBERON:0001473!2.92e-10!8;UBERON:0004536!2.92e-10!8;UBERON:0006558!2.92e-10!8;UBERON:0002298!4.27e-10!8;UBERON:0002346!4.92e-10!90;UBERON:0001017!1.03e-09!82;UBERON:0000073!3.34e-09!94;UBERON:0001016!3.34e-09!94;UBERON:0004111!1.20e-08!241;UBERON:0002037!2.14e-08!6;UBERON:0006215!2.14e-08!6;UBERON:0002465!3.23e-08!10;UBERON:0000988!3.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.21e-40;1!UBERON:0006518;2.21e-40;1!UBERON:0008949;2.21e-40;1!UBERON:0000101;2.21e-40;1!UBERON:0002167;2.21e-40;1!UBERON:0002037;1.82e-27;6!UBERON:0002680;1.03e-18;9!UBERON:0001895;1.03e-18;9!UBERON:0004733;2.57e-14;12!UBERON:0002028;2.57e-14;12!UBERON:0004732;2.68e-13;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.21e-40,1;UBERON:0006518,2.21e-40,1;UBERON:0008949,2.21e-40,1;UBERON:0000101,2.21e-40,1;UBERON:0002167,2.21e-40,1;UBERON:0002037,1.82e-27,6;UBERON:0006215,1.82e-27,6;UBERON:0002680,1.03e-18,9;UBERON:0001895,1.03e-18,9;UBERON:0010092,1.03e-18,9;UBERON:0004733,2.57e-14,12;UBERON:0002028,2.57e-14,12;UBERON:0007277,2.57e-14,12;UBERON:0004732,2.68e-13,13;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15 | |||
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|short_description=p2@CASP12 | |||
}} | }} |
Latest revision as of 20:27, 24 September 2015
Short description: | p2@CASP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CASP12_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -39bp_to_ENST00000422698_5end |
EntrezGene: | CASP12 |
HGNC: | 19004 |
UniProt: | D6RBN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 7.25e-08 | 6 |
endothelial cell of lymphatic vessel | 7.25e-08 | 6 |
vascular lymphangioblast | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.21e-40 | 1 |
right lung lobe | 2.21e-40 | 1 |
lower lobe of lung | 2.21e-40 | 1 |
lobe of lung | 2.21e-40 | 1 |
right lung | 2.21e-40 | 1 |
cerebellum | 1.82e-27 | 6 |
rhombic lip | 1.82e-27 | 6 |
regional part of metencephalon | 1.03e-18 | 9 |
metencephalon | 1.03e-18 | 9 |
future metencephalon | 1.03e-18 | 9 |
segmental subdivision of hindbrain | 2.57e-14 | 12 |
hindbrain | 2.57e-14 | 12 |
presumptive hindbrain | 2.57e-14 | 12 |
segmental subdivision of nervous system | 2.68e-13 | 13 |
posterior neural tube | 1.15e-11 | 15 |
chordal neural plate | 1.15e-11 | 15 |