FFCP PHASE1:Hg19::chr10:90147048..90147064,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:90147048..90147064,- to FFCP PHASE1:Hg19::chr10:90147048..90147064,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:90147048..90147064,- | |||
|description=CAGE_peak_at_chr10:90147048..90147064,- | |||
|id=chr10:90147048..90147064,- | |||
|ontology_enrichment_celltype=CL:0000945!9.46e-20!24;CL:0000826!9.46e-20!24;CL:0000037!2.10e-19!172;CL:0000566!2.10e-19!172;CL:0002032!9.54e-19!165;CL:0000837!9.54e-19!165;CL:0002087!3.20e-18!119;CL:0002031!4.92e-18!124;CL:0000988!1.82e-17!182;CL:0000738!2.37e-16!140;CL:0000236!2.16e-12!14;CL:0002057!9.13e-12!42;CL:0000838!9.93e-12!52;CL:0000542!2.16e-11!53;CL:0000051!2.16e-11!53;CL:0000860!1.27e-10!45;CL:0002009!5.51e-09!65;CL:0000763!1.31e-08!112;CL:0000049!1.31e-08!112;CL:0002194!1.75e-08!63;CL:0000576!1.75e-08!63;CL:0000040!1.75e-08!63;CL:0000559!1.75e-08!63;CL:0000557!9.70e-08!71;CL:0000839!4.29e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.27e-20;24!CL:0000860;1.84e-13;33!CL:0002057;1.84e-13;33!CL:0000236;5.61e-10;13!CL:0000037;8.30e-10;1!CL:0001024;8.30e-10;1!CL:0000473;1.76e-07;39!CL:0000234;1.76e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.92e-20,24;CL:0000826,1.92e-20,24;CL:0002087,1.06e-14,115;CL:0002031,5.66e-14,120;CL:0000738,5.28e-12,136;CL:0000860,5.43e-11,42;CL:0002057,5.43e-11,42;CL:0000037,1.30e-10,168;CL:0000988,6.43e-10,177;CL:0001024,8.68e-10,1;CL:0002032,1.05e-09,161;CL:0000837,1.05e-09,161;CL:0000473,1.73e-09,48;CL:0000234,1.73e-09,48;CL:0000236,2.27e-09,14;CL:0000838,7.21e-09,52;CL:0000542,1.11e-08,53;CL:0000051,1.11e-08,53;CL:0002194,2.21e-07,59;CL:0000576,2.21e-07,59;CL:0000040,2.21e-07,59;CL:0000559,2.21e-07,59;CL:0002009,4.14e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;5.76e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;8.30e-10;1!DOID:0070004;8.30e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,7.98e-10,1;DOID:0070004,7.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.30e-08!112;UBERON:0002371!5.68e-08!80;UBERON:0002405!8.66e-08!115;UBERON:0002619!1.47e-07!22;UBERON:0001950!5.19e-07!20;UBERON:0001474!5.47e-07!86;UBERON:0002390!6.57e-07!102;UBERON:0003061!6.57e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.60e-09,76;UBERON:0002405,1.76e-08,93;UBERON:0001474,4.83e-08,82;UBERON:0002390,5.84e-08,98;UBERON:0003061,5.84e-08,98;UBERON:0004765,3.38e-07,90;UBERON:0002193,4.60e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.47781061009902,1.81034797021462,0,0,0,0,0,0,0.774672005803016,0.142169232487422,4.11040615068786,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.863077176966451,0.256160706529101,1.6553756092201,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0.797854630486527,0.852449501065388,0.870627715885752,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,1.52032191293582,1.21079900526674,2.20966581592539,1.58231193720442,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.853460445133014,0,0.574752439954483,0.661044872784862,1.90810750907073,0,0,1.14681968437569,2.64342657158052,0,1.58030450865046,0,0,0,0,0,0,1.94826728407911,0,0.589211814949674,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0.869409257205157,0.741432815810302,1.33770414044857,0,0,0.383220493601921,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.426851060090485,0,0.798317485731266,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0,0.963528450622197,0,0,0.343505344755765,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65390223834939,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.449947783103001,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0.983617892129413,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,4.82201943050284,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0.630893960010027,0,0,0,0,1.41696576325585,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0.460935950223117,0,0,0.197318320688547,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,2.54506328613017,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,1.47781061009902,1.81034797021462,0,0,0,0,0,0,0.774672005803016,0.142169232487422,4.11040615068786,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.863077176966451,0.256160706529101,1.6553756092201,0,0,0,0,0,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0.797854630486527,0.852449501065388,0.870627715885752,1.13477044938228,1.24564449799115,1.50749199154046,0.521482918420201,1.52032191293582,1.21079900526674,2.20966581592539,1.58231193720442,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.853460445133014,0,0.574752439954483,0.661044872784862,1.90810750907073,0,0,1.14681968437569,2.64342657158052,0,1.58030450865046,0,0,0,0,0,0,1.94826728407911,0,0.589211814949674,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0,0,0.869409257205157,0.741432815810302,1.33770414044857,0,0,0.383220493601921,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0.426851060090485,0,0.798317485731266,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0.156679895773023,0,0,0.963528450622197,0,0,0.343505344755765,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65390223834939,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91227394607833,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0.449947783103001,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.5013797880454,0,0.983617892129413,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,4.82201943050284,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0.630893960010027,0,0,0,0,1.41696576325585,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0.460935950223117,0,0,0.197318320688547,0.118193840883968,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516711278688049,2.54506328613017,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:90147048..90147064,- | |||
}} | }} |
Latest revision as of 16:27, 23 July 2015
Short description: | p@chr10:90147048..90147064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90147048..90147064, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.92e-20 | 24 |
pro-B cell | 1.92e-20 | 24 |
nongranular leukocyte | 1.06e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 5.66e-14 | 120 |
leukocyte | 5.28e-12 | 136 |
classical monocyte | 5.43e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-11 | 42 |
hematopoietic stem cell | 1.30e-10 | 168 |
hematopoietic cell | 6.43e-10 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 8.68e-10 | 1 |
hematopoietic oligopotent progenitor cell | 1.05e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-09 | 161 |
defensive cell | 1.73e-09 | 48 |
phagocyte | 1.73e-09 | 48 |
B cell | 2.27e-09 | 14 |
lymphoid lineage restricted progenitor cell | 7.21e-09 | 52 |
lymphocyte | 1.11e-08 | 53 |
common lymphoid progenitor | 1.11e-08 | 53 |
monopoietic cell | 2.21e-07 | 59 |
monocyte | 2.21e-07 | 59 |
monoblast | 2.21e-07 | 59 |
promonocyte | 2.21e-07 | 59 |
macrophage dendritic cell progenitor | 4.14e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.60e-09 | 76 |
immune system | 1.76e-08 | 93 |
bone element | 4.83e-08 | 82 |
hematopoietic system | 5.84e-08 | 98 |
blood island | 5.84e-08 | 98 |
skeletal element | 3.38e-07 | 90 |
hemolymphoid system | 4.60e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.98e-10 | 1 |
myeloma | 7.98e-10 | 1 |