FFCP PHASE1:Hg19::chr10:81107216..81107237,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:81107216..81107237,+ to FFCP PHASE1:Hg19::chr10:81107216..81107237,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10105 | |EntrezGene=10105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9259 | |HGNC=9259 | ||
|TSSclassifier=strong | |||
|UniProt=P30405,Q2YDB7 | |UniProt=P30405,Q2YDB7 | ||
|association_with_transcript=0bp_to_ENST00000225174,ENST00000394579,ENST00000498681,NM_005729,uc001kai.2,uc001kaj.2_5end | |||
|cluster_id=chr10:81107216..81107237,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_1_at_PPIF_5end | |||
|id=chr10:81107216..81107237,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.69e-23!112;CL:0000049!3.69e-23!112;CL:0000860!5.86e-19!45;CL:0002057!1.85e-18!42;CL:0002009!1.14e-17!65;CL:0000766!5.08e-17!76;CL:0002194!1.37e-16!63;CL:0000576!1.37e-16!63;CL:0000040!1.37e-16!63;CL:0000559!1.37e-16!63;CL:0000557!1.35e-14!71;CL:0000012!1.41e-13!682;CL:0000548!3.34e-13!679;CL:0000004!3.34e-13!679;CL:0000255!3.34e-13!679;CL:0000063!1.05e-12!578;CL:0000839!7.87e-12!70;CL:0002032!4.68e-09!165;CL:0000837!4.68e-09!165;CL:0000037!7.74e-09!172;CL:0000566!7.74e-09!172;CL:0000988!1.06e-08!182;CL:0000144!2.87e-08!625;CL:0002320!1.86e-07!365;CL:0000134!1.98e-07!358;CL:0002371!2.49e-07!591;CL:0000003!2.54e-07!722;CL:0000034!7.69e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.68e-19;33!CL:0002057;2.68e-19;33!CL:0000473;9.45e-18;39!CL:0000234;9.45e-18;39!CL:0000576;2.58e-10;48!CL:0000763;1.12e-08;100!CL:0000766;2.75e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.96e-23,108;CL:0000049,2.96e-23,108;CL:0000473,1.48e-20,48;CL:0000234,1.48e-20,48;CL:0000860,1.85e-18,42;CL:0002057,1.85e-18,42;CL:0002009,5.75e-18,61;CL:0000766,3.42e-17,72;CL:0002194,7.23e-17,59;CL:0000576,7.23e-17,59;CL:0000040,7.23e-17,59;CL:0000559,7.23e-17,59;CL:0000557,9.94e-15,67;CL:0000839,6.92e-12,66;CL:0002032,6.53e-09,161;CL:0000837,6.53e-09,161;CL:0000037,1.09e-08,168;CL:0000988,1.45e-08,177;CL:0002320,4.70e-07,361;CL:0000134,5.00e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.44e-14;42!CL:0000049;7.30e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!1.13e-07!31;DOID:2531!3.62e-07!51;DOID:0060083!3.62e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.97e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.13e-07,31;DOID:2531,3.62e-07,51;DOID:0060083,3.62e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.43e-14!80;UBERON:0001474!1.12e-12!86;UBERON:0004765!2.72e-12!101;UBERON:0001434!2.72e-12!101;UBERON:0002390!8.57e-12!102;UBERON:0003061!8.57e-12!102;UBERON:0002405!1.51e-11!115;UBERON:0002193!9.06e-10!112;UBERON:0002204!1.18e-09!167;UBERON:0000926!2.14e-07!448;UBERON:0004120!2.14e-07!448;UBERON:0006603!2.14e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-14,76;UBERON:0001474,1.10e-12,82;UBERON:0004765,1.35e-12,90;UBERON:0001434,7.25e-12,100;UBERON:0002390,9.79e-12,98;UBERON:0003061,9.79e-12,98;UBERON:0002405,5.94e-10,93;UBERON:0002193,1.14e-09,108;UBERON:0002204,3.23e-09,167 | |||
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| ||
|short_description=p1@PPIF | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p1@PPIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPIF_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000225174, ENST00000394579, ENST00000498681, NM_005729, uc001kai.2, uc001kaj.2_5end |
EntrezGene: | PPIF |
HGNC: | 9259 |
UniProt: | P30405Q2YDB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.96e-23 | 108 |
common myeloid progenitor | 2.96e-23 | 108 |
defensive cell | 1.48e-20 | 48 |
phagocyte | 1.48e-20 | 48 |
classical monocyte | 1.85e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-18 | 42 |
macrophage dendritic cell progenitor | 5.75e-18 | 61 |
myeloid leukocyte | 3.42e-17 | 72 |
monopoietic cell | 7.23e-17 | 59 |
monocyte | 7.23e-17 | 59 |
monoblast | 7.23e-17 | 59 |
promonocyte | 7.23e-17 | 59 |
granulocyte monocyte progenitor cell | 9.94e-15 | 67 |
myeloid lineage restricted progenitor cell | 6.92e-12 | 66 |
hematopoietic oligopotent progenitor cell | 6.53e-09 | 161 |
hematopoietic multipotent progenitor cell | 6.53e-09 | 161 |
hematopoietic stem cell | 1.09e-08 | 168 |
hematopoietic cell | 1.45e-08 | 177 |
connective tissue cell | 4.70e-07 | 361 |
mesenchymal cell | 5.00e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-14 | 76 |
bone element | 1.10e-12 | 82 |
skeletal element | 1.35e-12 | 90 |
skeletal system | 7.25e-12 | 100 |
hematopoietic system | 9.79e-12 | 98 |
blood island | 9.79e-12 | 98 |
immune system | 5.94e-10 | 93 |
hemolymphoid system | 1.14e-09 | 108 |
musculoskeletal system | 3.23e-09 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.13e-07 | 31 |
hematologic cancer | 3.62e-07 | 51 |
immune system cancer | 3.62e-07 | 51 |