FFCP PHASE1:Hg19::chr10:8096772..8096787,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:8096772..8096787,+ to FFCP PHASE1:Hg19::chr10:8096772..8096787,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2625 | |EntrezGene=2625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4172 | |HGNC=4172 | ||
|TSSclassifier=strong | |||
|UniProt=P23771 | |UniProt=P23771 | ||
|association_with_transcript=3bp_to_ENST00000346208_5end | |||
|cluster_id=chr10:8096772..8096787,+ | |||
|description=CAGE_peak_2_at_GATA3_5end | |||
|id=chr10:8096772..8096787,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.41e-13!25;CL:0000827!3.41e-13!25;CL:0000791!1.58e-11!18;CL:0000789!1.58e-11!18;CL:0002420!1.58e-11!18;CL:0002419!1.58e-11!18;CL:0000790!1.58e-11!18;CL:0000625!1.94e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.19e-16;25!CL:0000791;1.81e-14;18!CL:0000789;1.81e-14;18!CL:0002419;1.81e-14;18!CL:0000625;3.50e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.11e-16,25;CL:0000827,4.11e-16,25;CL:0000791,1.78e-14,18;CL:0000789,1.78e-14,18;CL:0002420,1.78e-14,18;CL:0002419,1.78e-14,18;CL:0000790,1.78e-14,18;CL:0000625,3.49e-09,11;CL:0000838,4.38e-08,52;CL:0000542,9.58e-08,53;CL:0000051,9.58e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.81e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.61e-08!15;UBERON:0000179!5.61e-08!15;UBERON:0000463!5.61e-08!15;UBERON:0005631!1.82e-07!14;UBERON:0000158!1.82e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.12e-10;15!UBERON:0000179;7.12e-10;15!UBERON:0000463;7.12e-10;15!UBERON:0000478;2.53e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.01e-10,15;UBERON:0000179,7.01e-10,15;UBERON:0000463,7.01e-10,15;UBERON:0005631,7.35e-10,14;UBERON:0000158,7.35e-10,14;UBERON:0003124,6.29e-08,7;UBERON:0003408,2.10e-07,10;UBERON:0000478,2.52e-07,24 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.986680828671798,4.00293193412522,0.893922188854576,0,0,0,0,1.22866968250754,0.697801167972428,114.68172036834,64.3591426877427,0.37129905888014,1.32558950291166,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.246301768349837,0.0787107813136792,17.7013924582007,46.0595277716655,14.0882672217629,0,0,0,0,0,0,3.32397245119126,14.8402891127905,10.6335326650767,0.223915474239924,1.94336199611388,0.77272670290256,0,1.13362783106643,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.768482119587302,0.47296445977717,0.689491361473237,1.29096936716765,2.70852973188684,0.752969358170419,1.09162460023138,0.674170453335254,0,1.92557416245656,0,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,1.25624332628372,1.0429658368404,0,0,2.20966581592539,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0,0,0,0,0,1.76171156811282,1.14681968437569,0,16.2547483264645,0.263384084775077,87.9292672408834,78.2091417870838,62.7084571948503,15.7155305667237,9.45174573237412,9.9424039204294,7.79306913631645,119.097778410251,17.9709603559651,19.0519149341914,22.4767206924963,59.1781897132619,78.2957272310467,47.193678621255,51.1247532903819,40.8622350886424,20.1669725900402,18.1927763101005,20.9071047609954,35.6924429497333,19.544245173698,15.4632350467183,35.1697371907109,12.7426165729639,6.51083453856419,9.50452044448374,16.1115377413217,20.4778577847069,16.240994451805,19.6525119196534,12.3169199538157,71.57039384478,85.3134224549388,54.019502648284,0,0.670700859703636,2.30152611318355,0,0,0.144846518960824,0,0.973269740605272,0,0,0.263504357079378,0.785874452986276,0.364295288292542,0.741568885568859,0.324547393654683,0.174129737299267,0,0.953962497221368,1.14398982156026,0.371457501329565,2.58391129576717,0,6.2485290289367,5.6530794192401,3.77549492588915,0.275118041940067,1.25396979922086,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0.735326160691737,0,3.57198913136319,2.69435247151404,2.36484109014977,4.5994991239765,10.4419222552494,4.76324534219059,9.22462922052443,15.511210565933,0,0,0,0,0,0.354668382198357,1.12135520028461,9.60740961567345,0.24666754841716,0.622422070799533,0.942974704487816,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0.680593098960126,0.89694817844431,0,0,0.600182192168805,0.206105058476878,0,0,0.337552664482532,0.389748020644795,0.252433774244115,0.0920498986422993,0,3.55009592516614,0.201504196455281,0.508681776931463,0,0.272746120590835,0,0.243947412259191,0.265059536642971,2.20768491452085,3.83545903556871,0.756962552626885,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,2.80483547606892,0,0,0,0,1.18157981336281,44.1463099414651,1.22988438543114,0.171567810298526,8.12152112023829,2.24803506515239,2.31216636546751,0,0,0,0,0.927443239800615,0.352226082707465,0.144366447761074,0,0,80.6008485918461,93.5749916683411,0,0,0,0,0.16798212819886,0,5.0152772713595,4.94077695473735,4.60059214998253,0.492663237895943,0.088048434013226,3.10992173311158,0.288239906833923,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0.542621605391443,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0,1.2328579353023,0.179060963239896,15.8040053030873,60.4884433819917,61.2382312601029,40.81308553696,0,0,0,0,0,1.49801404789436,0,6.63064821497657,2.69921281782108,1.00034104211935,0.813795071099207,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,16.9549781420768,12.7271378482984,17.289864364158,57.8973661462356,79.8890109650386,47.1728857594301,0,2.455391572609,0.841980283299221,0,1.53512174720011,0,0,0,0,0,0,0,1.57117284469109,16.0405176242628,5.70902131402557,0.34444334449382,0,0.393373244878272,18.0479845162965,3.15762882128101,0.784349769176855,4.38417673959782,0.633309773357254,2.27466768141793,0.170093705276516,0.431831832204279,7.71136263451447,1.62567862526312,0,2.80363900349542,7.47968408035852,1.56712328305525,0,0,0,5.9042636225947,1.62689197332152,18.3413000732946,0,0,12.6338418359158,11.7010844286574,0,0,0,0.307007349452259,0,0,0,0.426133137080504,0.0890320356467374,0,0.192190067365106,0,0,0,0.31481234683064,0.6970372701606,4.92853728281742,3.72614221221915,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,3.63928466831969,9.5106192703805,5.47635993110675,0,0,0,0,0.141405431953713,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0.281695602532241,0.430234056612155,0.589494246078727,0.35667105148125,0,0.422215270595328,0,0,0,0,0.670302275535787,0,18.5463287530255,24.9693116149313,16.8471475667626,10.6423236848802,7.3511488066227,6.08937131078603,6.117097657139,9.68400218196076,10.4821981201427,12.3408681925858,8.43015304550532,9.72056587028607,5.55187623405989,0,0,37.9812334770599,0,2.74111504655245,40.3374251785508,32.841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| ||
|short_description=p2@GATA3 | |||
}} | }} |
Latest revision as of 12:03, 19 September 2015
Short description: | p2@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GATA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000346208_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | P23771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.11e-16 | 25 |
pro-T cell | 4.11e-16 | 25 |
mature alpha-beta T cell | 1.78e-14 | 18 |
alpha-beta T cell | 1.78e-14 | 18 |
immature T cell | 1.78e-14 | 18 |
mature T cell | 1.78e-14 | 18 |
immature alpha-beta T cell | 1.78e-14 | 18 |
CD8-positive, alpha-beta T cell | 3.49e-09 | 11 |
lymphoid lineage restricted progenitor cell | 4.38e-08 | 52 |
lymphocyte | 9.58e-08 | 53 |
common lymphoid progenitor | 9.58e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 7.01e-10 | 15 |
haemolymphatic fluid | 7.01e-10 | 15 |
organism substance | 7.01e-10 | 15 |
extraembryonic membrane | 7.35e-10 | 14 |
membranous layer | 7.35e-10 | 14 |
chorion | 6.29e-08 | 7 |
gland of gut | 2.10e-07 | 10 |
extraembryonic structure | 2.52e-07 | 24 |