FFCP PHASE1:Hg19::chr10:74385876..74385891,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:74385876..74385891,- to FFCP PHASE1:Hg19::chr10:74385876..74385891,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10367 | |EntrezGene=10367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1530 | |HGNC=1530 | ||
|TSSclassifier=strong | |||
|UniProt=F6XEV2,E9PQV6,Q9BPX6 | |UniProt=F6XEV2,E9PQV6,Q9BPX6 | ||
|association_with_transcript=7bp_to_,-7bp_to_ENST00000398761,ENST00000476605,uc001jtb.1_5end | |||
|cluster_id=chr10:74385876..74385891,- | |||
|description=CAGE_peak_2_at_MICU1_5end | |||
|id=chr10:74385876..74385891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.29e-20!57;UBERON:0005068!2.29e-20!57;UBERON:0006241!2.29e-20!57;UBERON:0007135!2.29e-20!57;UBERON:0002616!3.98e-19!59;UBERON:0005743!3.06e-17!86;UBERON:0000073!4.24e-17!94;UBERON:0001016!4.24e-17!94;UBERON:0007023!5.54e-17!115;UBERON:0001017!7.71e-17!82;UBERON:0000955!7.76e-17!69;UBERON:0006238!7.76e-17!69;UBERON:0002780!1.71e-16!41;UBERON:0001890!1.71e-16!41;UBERON:0006240!1.71e-16!41;UBERON:0003080!3.59e-16!42;UBERON:0001893!5.83e-14!34;UBERON:0002020!1.22e-13!34;UBERON:0003528!1.22e-13!34;UBERON:0002791!2.45e-13!33;UBERON:0001869!2.61e-13!32;UBERON:0003075!4.96e-13!86;UBERON:0007284!4.96e-13!86;UBERON:0000033!1.60e-11!123;UBERON:0000153!2.85e-11!129;UBERON:0007811!2.85e-11!129;UBERON:0002619!5.32e-11!22;UBERON:0000956!5.57e-11!25;UBERON:0000203!5.57e-11!25;UBERON:0002346!5.73e-11!90;UBERON:0003056!1.65e-10!61;UBERON:0001950!2.34e-10!20;UBERON:0000062!3.58e-10!511;UBERON:0000468!5.86e-09!659;UBERON:0000475!5.94e-09!365;UBERON:0000467!1.21e-08!625;UBERON:0000480!1.34e-08!626;UBERON:0004121!2.50e-08!169;UBERON:0000481!1.02e-07!347;UBERON:0000924!3.02e-07!173;UBERON:0006601!3.02e-07!173;UBERON:0000064!7.36e-07!219;UBERON:0000922!9.54e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.66e-12;34!UBERON:0001869;8.82e-12;32!UBERON:0003528;1.29e-11;34!UBERON:0002020;1.29e-11;34!UBERON:0002780;1.65e-11;41!UBERON:0001890;1.65e-11;41!UBERON:0002791;1.96e-11;32!UBERON:0000073;2.70e-11;53!UBERON:0002616;2.70e-11;53!UBERON:0000956;1.15e-10;25!UBERON:0000203;1.15e-10;25!UBERON:0002619;1.25e-10;22!UBERON:0001950;5.29e-10;20!UBERON:0001017;6.57e-08;75!UBERON:0000955;5.63e-07;68!UBERON:0001016;8.89e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-20,56;UBERON:0005068,1.14e-20,56;UBERON:0006241,1.14e-20,56;UBERON:0007135,1.14e-20,56;UBERON:0000073,1.11e-19,53;UBERON:0002616,1.11e-19,53;UBERON:0000955,4.96e-17,68;UBERON:0006238,4.96e-17,68;UBERON:0001017,5.33e-17,81;UBERON:0001016,8.01e-17,89;UBERON:0007023,1.47e-16,114;UBERON:0002780,1.71e-16,41;UBERON:0001890,1.71e-16,41;UBERON:0003080,1.71e-16,41;UBERON:0006240,1.71e-16,41;UBERON:0011216,4.15e-14,223;UBERON:0001893,5.82e-14,34;UBERON:0003528,1.22e-13,34;UBERON:0002020,1.22e-13,34;UBERON:0001869,2.61e-13,32;UBERON:0002791,8.54e-13,32;UBERON:0003075,3.48e-12,82;UBERON:0007284,3.48e-12,82;UBERON:0002619,5.32e-11,22;UBERON:0000956,5.56e-11,25;UBERON:0000203,5.56e-11,25;UBERON:0003056,1.73e-10,61;UBERON:0001950,2.33e-10,20;UBERON:0002346,3.70e-10,86;UBERON:0010314,1.31e-08,132;UBERON:0004121,8.50e-07,171;UBERON:0000924,8.50e-07,171;UBERON:0006601,8.50e-07,171 | |||
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| ||
|short_description=p2@MICU1 | |||
}} | }} |
Latest revision as of 06:03, 19 September 2015
Short description: | p2@MICU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MICU1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_, -7bp_to_ENST00000398761, ENST00000476605, uc001jtb.1_5end |
EntrezGene: | MICU1 |
HGNC: | 1530 |
UniProt: | F6XEV2E9PQV6Q9BPX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.14e-20 | 56 |
neural rod | 1.14e-20 | 56 |
future spinal cord | 1.14e-20 | 56 |
neural keel | 1.14e-20 | 56 |
regional part of nervous system | 1.11e-19 | 53 |
regional part of brain | 1.11e-19 | 53 |
brain | 4.96e-17 | 68 |
future brain | 4.96e-17 | 68 |
central nervous system | 5.33e-17 | 81 |
nervous system | 8.01e-17 | 89 |
adult organism | 1.47e-16 | 114 |
regional part of forebrain | 1.71e-16 | 41 |
forebrain | 1.71e-16 | 41 |
anterior neural tube | 1.71e-16 | 41 |
future forebrain | 1.71e-16 | 41 |
organ system subdivision | 4.15e-14 | 223 |
telencephalon | 5.82e-14 | 34 |
brain grey matter | 1.22e-13 | 34 |
gray matter | 1.22e-13 | 34 |
cerebral hemisphere | 2.61e-13 | 32 |
regional part of telencephalon | 8.54e-13 | 32 |
neural plate | 3.48e-12 | 82 |
presumptive neural plate | 3.48e-12 | 82 |
regional part of cerebral cortex | 5.32e-11 | 22 |
cerebral cortex | 5.56e-11 | 25 |
pallium | 5.56e-11 | 25 |
pre-chordal neural plate | 1.73e-10 | 61 |
neocortex | 2.33e-10 | 20 |
neurectoderm | 3.70e-10 | 86 |
structure with developmental contribution from neural crest | 1.31e-08 | 132 |
ectoderm-derived structure | 8.50e-07 | 171 |
ectoderm | 8.50e-07 | 171 |
presumptive ectoderm | 8.50e-07 | 171 |