FFCP PHASE1:Hg19::chr10:64028544..64028555,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr10:64028544..64028555,- to FFCP PHASE1:Hg19::chr10:64028544..64028555,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=219790 | |EntrezGene=219790 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19364 | |HGNC=19364 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZC4 | |UniProt=Q8IZC4 | ||
|association_with_transcript=-78bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | |||
|cluster_id=chr10:64028544..64028555,- | |||
|description=CAGE_peak_7_at_RTKN2_5end | |||
|id=chr10:64028544..64028555,- | |||
|ontology_enrichment_celltype=CL:0000066!4.22e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002253;2.41e-12;2!CL:1000507;2.00e-09;10!CL:1000494;2.00e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.72e-12,2;CL:1000507,1.65e-09,10;CL:1000494,1.65e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.03e-07;1 | |||
|ontology_enrichment_disease=DOID:162!1.51e-19!235;DOID:14566!2.52e-18!239;DOID:0050687!1.92e-14!143;DOID:305!1.06e-13!106;DOID:0050686!2.76e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0060085;5.28e-07;1!DOID:3165;5.28e-07;1!DOID:3151;5.28e-07;1!DOID:0060121;5.28e-07;1!DOID:2438;5.28e-07;1!DOID:4418;5.28e-07;1!DOID:3149;5.28e-07;1!DOID:1749;6.93e-07;14!DOID:3119;9.39e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.82e-07,1;DOID:3149,3.82e-07,1;DOID:0060085,5.14e-07,1;DOID:3165,5.14e-07,1;DOID:0060121,5.14e-07,1;DOID:2438,5.14e-07,1;DOID:4418,5.14e-07,1;DOID:1749,6.69e-07,14;DOID:3119,8.45e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005153!2.14e-08!37;UBERON:0004921!2.22e-07!129;UBERON:0004185!2.22e-07!129;UBERON:0001007!3.01e-07!155;UBERON:0001555!3.01e-07!155;UBERON:0007026!3.01e-07!155;UBERON:0001046!7.59e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.14e-13;4!UBERON:0004907;4.90e-11;5!UBERON:0004211;2.00e-09;10!UBERON:0009773;2.00e-09;10!UBERON:0001231;2.00e-09;10!UBERON:0004810;2.00e-09;10!UBERON:0000997;2.03e-07;1!UBERON:0005056;2.03e-07;1!UBERON:0004176;2.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.12e-13,4;UBERON:0004907,4.84e-11,5;UBERON:0004810,1.65e-09,10;UBERON:0000997,1.86e-07,1;UBERON:0005056,1.86e-07,1;UBERON:0001046,1.93e-07,19 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0.572471974262113,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0,0.175669571386252,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.731842236777572,0.265059536642971,0.116193942869518,0.621966330092223,0.504641701751257,0.72995471815166,0,0,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.55146986366197,0,0.237270619111097,0.808987848960987,0.588664395376038,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0,0,0.301586917234893,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.358234090811393,0,0.383382679165211,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0.514137463516618,0,0.285826432630578,0.112131084345361,0,0,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.630809660135739,1.05427273493442,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0.355123450626254,0.246381468041427,0,0.232420756919918,0.725156697549733,0,0.460404944679482,1.03333003348146,0.364182336013434,0.393373244878272,2.25599806453706,1.00119938235739,1.56869953835371,0,1.68882606228601,0,0,0.647747748306418,0,0,0,0.764628819135115,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.412164046590889,0.183138929636687,0.247528499761764,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0.487426979262569,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.7133421029625,0.709522128141196,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0.371606350251437,0,1.06712765022621,0.797131363644112,0,0,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0,0,0.222886768554957,0,0,0,0,0,0,0.445234820091624,0,1.47787785689595,0,0.552567831062295,1.25966373927138,0.818149460017238,0,0,0.449341755736634,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.762569244632931,7.94715342388039,0.230850775511391,0.113942055847001,0,1.25660702173681,0.651884231532048,0,0.274792780205587,0,1.02193298195737,0,0,0,0,0,0.569261198172555,0,0,0.652931232636591,1.27217764290547,1.08194319871046,0.995261931078505,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0.150323419414493,0.311064574191741,0,0,0.313932918407225,0,0.284609546029793,0,0,2.54780233277382,0.522355239482415,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0.290967049465258,0,0,0.822251547880505,1.19228767021794,0.0633107959558787,0.195551382734803,0.160317640503067,0,1.39866726707491,0.432271251462318,0.343609788497747,0.171594997861965,0,0,0.471388069233591,0.67952103036807,0.627617077873999,0.203996435272644,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.335917362433631,0,0,0.315132729228895,0.494495150286999,0.202210631562555,0.0984274815147488,0,0,0,0.964518890790115,0.962776056180637,0.415440338029185,0,0,0,1.34173875039706,0.0788057072991982,0.262272940674991,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0.704815022316672,1.17466153824464,1.10043013569766,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,0.276697269872462,0.37494122388632,0.454947352624943,0.570930667089935,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0.73927574994817,0,0,0.931577741257556,0,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,1.20008329398946,0.343395705182793,0,0,0.192619830407303,0.214441591374926,0.782982875895635,0.226705925512272,1.15761237161917,0.244736704506468,0,0,0.438568099157414,0.176689145945881,0,0,0.256241518587947,0.345430341731199,0.3038599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| ||
|short_description=p7@RTKN2 | |||
}} | }} |
Latest revision as of 19:01, 18 September 2015
Short description: | p7@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RTKN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.72e-12 | 2 |
kidney tubule cell | 1.65e-09 | 10 |
nephron tubule epithelial cell | 1.65e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.12e-13 | 4 |
lower digestive tract | 4.84e-11 | 5 |
nephron tubule epithelium | 1.65e-09 | 10 |
mammalian vulva | 1.86e-07 | 1 |
external female genitalia | 1.86e-07 | 1 |
hindgut | 1.93e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.82e-07 | 1 |
keratoacanthoma | 3.82e-07 | 1 |
organ system benign neoplasm | 5.14e-07 | 1 |
skin benign neoplasm | 5.14e-07 | 1 |
integumentary system benign neoplasm | 5.14e-07 | 1 |
dermis tumor | 5.14e-07 | 1 |
cutaneous fibrous histiocytoma | 5.14e-07 | 1 |
squamous cell carcinoma | 6.69e-07 | 14 |
gastrointestinal system cancer | 8.45e-07 | 14 |