FFCP PHASE1:Hg19::chr10:3934617..3934629,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3934617..3934629,- | |||
|coexpression_cluster_id=C722 | |||
|description=CAGE_peak_at_chr10:3934617..3934629,- | |||
|id=chr10:3934617..3934629,- | |||
|ontology_enrichment_celltype=CL:0000623!1.26e-17!3;CL:0000825!1.26e-17!3;CL:0000738!3.23e-15!140;CL:0000624!1.25e-14!6;CL:0000791!4.06e-14!18;CL:0000789!4.06e-14!18;CL:0002420!4.06e-14!18;CL:0002419!4.06e-14!18;CL:0000790!4.06e-14!18;CL:0000037!1.79e-11!172;CL:0000566!1.79e-11!172;CL:0002274!1.03e-10!5;CL:0000457!1.03e-10!5;CL:0002191!1.03e-10!5;CL:0000097!1.03e-10!5;CL:0000831!1.03e-10!5;CL:0002028!1.03e-10!5;CL:0000988!1.42e-10!182;CL:0002031!3.40e-10!124;CL:0000084!6.68e-10!25;CL:0000827!6.68e-10!25;CL:0002032!8.13e-10!165;CL:0000837!8.13e-10!165;CL:0002087!2.90e-09!119;CL:0000838!8.50e-09!52;CL:0000542!1.35e-08!53;CL:0000051!1.35e-08!53;CL:0000767!3.08e-08!3;CL:0002541!6.05e-08!3;CL:0000842!1.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.40e-40;3!CL:0000791;2.10e-18;18!CL:0000789;2.10e-18;18!CL:0002419;2.10e-18;18!CL:0000767;2.76e-18;3!CL:0000084;2.94e-13;25!CL:0000097;6.70e-12;5!CL:0000625;1.25e-11;11!CL:0000624;1.26e-09;6!CL:0000542;2.45e-08;53!CL:0000094;1.94e-07;8!CL:0000163;5.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.14e-40,3;CL:0000825,1.14e-40,3;CL:0000791,2.22e-18,18;CL:0000789,2.22e-18,18;CL:0002420,2.22e-18,18;CL:0002419,2.22e-18,18;CL:0000790,2.22e-18,18;CL:0000767,3.30e-18,3;CL:0000838,1.29e-15,52;CL:0000542,2.62e-15,53;CL:0000051,2.62e-15,53;CL:0000738,6.38e-15,136;CL:0000084,3.05e-13,25;CL:0000827,3.05e-13,25;CL:0002032,2.18e-12,161;CL:0000837,2.18e-12,161;CL:0002031,4.44e-12,120;CL:0000097,6.70e-12,5;CL:0002028,6.70e-12,5;CL:0000037,8.21e-12,168;CL:0000625,1.32e-11,11;CL:0000988,3.89e-11,177;CL:0000624,1.26e-09,6;CL:0002087,2.61e-08,115;CL:0000094,2.07e-07,8;CL:0000163,5.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;2.10e-18;18!CL:0000051;2.45e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.05e-08!3;UBERON:0000920!6.05e-08!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:3934617..3934629,- | |||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3934617..3934629, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3934617..3934629, - |
Coexpression cluster: | C722_Mast_Natural_CD8_CD4_CD19_mature_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.14e-40 | 3 |
pro-NK cell | 1.14e-40 | 3 |
mature alpha-beta T cell | 2.22e-18 | 18 |
alpha-beta T cell | 2.22e-18 | 18 |
immature T cell | 2.22e-18 | 18 |
mature T cell | 2.22e-18 | 18 |
immature alpha-beta T cell | 2.22e-18 | 18 |
basophil | 3.30e-18 | 3 |
lymphoid lineage restricted progenitor cell | 1.29e-15 | 52 |
lymphocyte | 2.62e-15 | 53 |
common lymphoid progenitor | 2.62e-15 | 53 |
leukocyte | 6.38e-15 | 136 |
T cell | 3.05e-13 | 25 |
pro-T cell | 3.05e-13 | 25 |
hematopoietic oligopotent progenitor cell | 2.18e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 4.44e-12 | 120 |
mast cell | 6.70e-12 | 5 |
basophil mast progenitor cell | 6.70e-12 | 5 |
hematopoietic stem cell | 8.21e-12 | 168 |
CD8-positive, alpha-beta T cell | 1.32e-11 | 11 |
hematopoietic cell | 3.89e-11 | 177 |
CD4-positive, alpha-beta T cell | 1.26e-09 | 6 |
nongranular leukocyte | 2.61e-08 | 115 |
granulocyte | 2.07e-07 | 8 |
endocrine cell | 5.37e-07 | 9 |