FFCP PHASE1:Hg19::chr10:121485273..121485320,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:121485273..121485320,- to FFCP PHASE1:Hg19::chr10:121485273..121485320,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:121485273..121485320,- | |||
|description=CAGE_peak_at_chr10:121485273..121485320,- | |||
|id=chr10:121485273..121485320,- | |||
|ontology_enrichment_celltype=CL:0002057!9.50e-25!42;CL:0000860!3.78e-22!45;CL:0000988!1.61e-20!182;CL:0000763!6.69e-20!112;CL:0000049!6.69e-20!112;CL:0000557!4.88e-19!71;CL:0000037!1.17e-18!172;CL:0000566!1.17e-18!172;CL:0000766!5.18e-18!76;CL:0000839!1.38e-17!70;CL:0002032!1.81e-17!165;CL:0000837!1.81e-17!165;CL:0002009!3.17e-17!65;CL:0002194!1.17e-16!63;CL:0000576!1.17e-16!63;CL:0000040!1.17e-16!63;CL:0000559!1.17e-16!63;CL:0000738!8.65e-16!140;CL:0002031!2.38e-14!124;CL:0002087!6.78e-14!119;CL:0002393!3.18e-07!9;CL:0002397!3.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-24;33!CL:0002057;1.05e-24;33!CL:0000576;1.62e-18;48!CL:0000473;3.58e-18;39!CL:0000234;3.58e-18;39!CL:0000766;4.43e-14;69!CL:0000763;1.90e-07;100!CL:0002393;1.97e-07;6!CL:0002397;1.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.96e-36,42;CL:0002057,8.96e-36,42;CL:0000473,2.21e-31,48;CL:0000234,2.21e-31,48;CL:0000557,1.61e-26,67;CL:0000766,5.25e-25,72;CL:0002009,2.26e-24,61;CL:0000839,1.29e-23,66;CL:0002194,1.55e-23,59;CL:0000576,1.55e-23,59;CL:0000040,1.55e-23,59;CL:0000559,1.55e-23,59;CL:0000763,1.21e-21,108;CL:0000049,1.21e-21,108;CL:0000988,5.81e-19,177;CL:0000037,4.29e-17,168;CL:0000738,2.66e-16,136;CL:0002032,2.64e-15,161;CL:0000837,2.64e-15,161;CL:0002031,6.53e-15,120;CL:0002087,1.12e-14,115;CL:0002393,6.55e-10,9;CL:0002397,6.55e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.48e-19!102;UBERON:0003061!5.48e-19!102;UBERON:0002371!9.85e-19!80;UBERON:0002193!5.12e-18!112;UBERON:0001474!2.63e-16!86;UBERON:0002405!1.45e-13!115;UBERON:0004765!8.90e-12!101;UBERON:0001434!8.90e-12!101;UBERON:0003081!9.59e-12!216;UBERON:0001049!1.59e-08!57;UBERON:0005068!1.59e-08!57;UBERON:0006241!1.59e-08!57;UBERON:0007135!1.59e-08!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.99e-25,76;UBERON:0002390,9.58e-24,98;UBERON:0003061,9.58e-24,98;UBERON:0002193,1.48e-22,108;UBERON:0001474,8.53e-22,82;UBERON:0002405,5.23e-21,93;UBERON:0004765,5.57e-18,90;UBERON:0003081,3.20e-16,203;UBERON:0001434,2.77e-15,100;UBERON:0002204,1.59e-08,167 | |||
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| ||
|short_description=p@chr10:121485273..121485320,- | |||
}} | }} |
Latest revision as of 11:01, 23 July 2015
Short description: | p@chr10:121485273..121485320, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:121485273..121485320, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.96e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.96e-36 | 42 |
defensive cell | 2.21e-31 | 48 |
phagocyte | 2.21e-31 | 48 |
granulocyte monocyte progenitor cell | 1.61e-26 | 67 |
myeloid leukocyte | 5.25e-25 | 72 |
macrophage dendritic cell progenitor | 2.26e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.29e-23 | 66 |
monopoietic cell | 1.55e-23 | 59 |
monocyte | 1.55e-23 | 59 |
monoblast | 1.55e-23 | 59 |
promonocyte | 1.55e-23 | 59 |
myeloid cell | 1.21e-21 | 108 |
common myeloid progenitor | 1.21e-21 | 108 |
hematopoietic cell | 5.81e-19 | 177 |
hematopoietic stem cell | 4.29e-17 | 168 |
leukocyte | 2.66e-16 | 136 |
hematopoietic oligopotent progenitor cell | 2.64e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 6.53e-15 | 120 |
nongranular leukocyte | 1.12e-14 | 115 |
intermediate monocyte | 6.55e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.55e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.99e-25 | 76 |
hematopoietic system | 9.58e-24 | 98 |
blood island | 9.58e-24 | 98 |
hemolymphoid system | 1.48e-22 | 108 |
bone element | 8.53e-22 | 82 |
immune system | 5.23e-21 | 93 |
skeletal element | 5.57e-18 | 90 |
lateral plate mesoderm | 3.20e-16 | 203 |
skeletal system | 2.77e-15 | 100 |
musculoskeletal system | 1.59e-08 | 167 |