FFCP PHASE1:Hg19::chr10:105677381..105677409,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105677381..105677409,- to FFCP PHASE1:Hg19::chr10:105677381..105677409,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79991 | |EntrezGene=79991 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26200 | |HGNC=26200 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H668 | |UniProt=Q9H668 | ||
|association_with_transcript=17bp_to_ENST00000369764,uc001kxl.2_5end | |||
|cluster_id=chr10:105677381..105677409,- | |||
|description=CAGE_peak_5_at_OBFC1_5end | |||
|id=chr10:105677381..105677409,- | |||
|ontology_enrichment_celltype=CL:0000791!6.18e-10!18;CL:0000789!6.18e-10!18;CL:0002420!6.18e-10!18;CL:0002419!6.18e-10!18;CL:0000790!6.18e-10!18;CL:0000625!2.51e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000708;5.98e-11;3!CL:0000625;9.01e-11;11!CL:0002549;7.34e-09;2!CL:0000791;1.34e-08;18!CL:0000789;1.34e-08;18!CL:0002419;1.34e-08;18!CL:0002575;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,5.07e-11,3;CL:0000625,5.95e-11,11;CL:0002549,7.39e-09,2;CL:0000791,1.04e-08,18;CL:0000789,1.04e-08,18;CL:0002420,1.04e-08,18;CL:0002419,1.04e-08,18;CL:0000790,1.04e-08,18;CL:0002575,7.14e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.34e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;5.98e-11;3!UBERON:0005629;7.34e-09;2!UBERON:0005358;7.34e-09;2!UBERON:0001886;7.34e-09;2!UBERON:0004086;7.34e-09;2!UBERON:0005282;7.34e-09;2!UBERON:0005281;7.34e-09;2!UBERON:0005284;1.58e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.07e-11,3;UBERON:0005629,7.39e-09,2;UBERON:0005358,7.39e-09,2;UBERON:0001886,7.39e-09,2;UBERON:0004086,7.39e-09,2;UBERON:0005282,7.39e-09,2;UBERON:0005281,7.39e-09,2;UBERON:0005284,1.54e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.845726424575827,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0.487932798790507,0.738726348460727,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.659702600373432,0.199463657621632,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,2.84217042164153,0.977766799900771,2.36723902867367,1.94826728407911,4.67923918917729,3.24066498222321,2.43687284041983,2.43723477388514,4.09892223122161,4.55207716459574,3.61763390128087,1.38175008892924,2.02862160014537,0.741432815810302,0.802622484269139,0,2.94604291013672,0.383220493601921,1.03088233644789,3.54227568827304,0.637130828648193,1.30216690771284,0.950452044448374,1.20460095262218,2.68771883424279,3.74792179657038,1.4206635122641,1.64225599384209,0.403213486449465,0.267440195783507,0.434473211648397,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0.196468613246569,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,0.550236083880135,0.208994966536811,1.03366703667732,1.42306505074684,0.33472061276467,0.402829317109147,2.28081631715554,0,0.735326160691737,0,0.267899184852239,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0.134710672069688,0,7.26515652695671,8.64263886719998,0,0.312160076830321,1.1409436430889,1.34503812496621,0.23486899728753,0.485618833104395,0.280901613404497,1.42907919878425,0.982674538494144,0.619954687054593,0,0,1.82032272387605,0,0.841680569770331,0.250237039743928,0.831192346452549,0,0,0.300476117813194,0.113432183160021,0,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0.658501712451753,0,0,0.0925884451585296,0.325808305310325,0,0,0.34779121492523,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,1.16426079513703,0.871901815541886,1.15014803749563,0,0,0.414656231081544,0,0,0,0,0,0,0,0.300343057843917,0,1.34557301214433,1.30788020649984,2.6401782895542,0,0,0,0,1.04007436911366,0,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0.977208552881205,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0.112085143993527,0.197030760201927,0.646882724578552,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.813795071099207,0,0,0.157702415033935,0,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,1.56640925970192,1.37257369524342,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,0,0.30239029332968,0,0,0,0.256278298511402,0,0,2.96836132889982,0.616838775210622,0,1.06765302817952,0,1.16210378459959,0,0.601519410909855,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0.574265537996172,1.30012049207304,0,0,0.462145851343933,0,0.413509717453592,0.429680979473094,0.145016693914229,0.596586391912706,0.0890320356467374,0,0,0.638063562472921,0.10115778085555,0,0,1.3940745403212,0.616067160352178,0,0,0,0,3.72158369359667,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0.359744915166629,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0,0,0,0.354761064070598,0.211107635297664,0,1.13841952129715,0,0.577332676353072,1.34060455107157,0,0.0941438007767792,0,0,0,0.689170200620878,0.507447609232169,0,0.569647187174163,0.714695326373367,0.411362273086194,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0,0,0,0.199579371432817,0.766021480529467,0.423347165447766,0,0,0.228234679033192,0,0,1.01575066680962,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54617834890261,0,0,0,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.409074730008619,0.123084805461069,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,3.64170569301139,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0.34823682632161,0,0,0.19351266257817,0,0.082115457053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| ||
|short_description=p5@OBFC1 | |||
}} | }} |
Latest revision as of 04:32, 16 September 2015
Short description: | p5@OBFC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OBFC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000369764, uc001kxl.2_5end |
EntrezGene: | OBFC1 |
HGNC: | 26200 |
UniProt: | Q9H668 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 5.07e-11 | 3 |
CD8-positive, alpha-beta T cell | 5.95e-11 | 11 |
fibroblast of choroid plexus | 7.39e-09 | 2 |
mature alpha-beta T cell | 1.04e-08 | 18 |
alpha-beta T cell | 1.04e-08 | 18 |
immature T cell | 1.04e-08 | 18 |
mature T cell | 1.04e-08 | 18 |
immature alpha-beta T cell | 1.04e-08 | 18 |
central nervous system pericyte | 7.14e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 5.07e-11 | 3 |
vascular plexus | 7.39e-09 | 2 |
ventricle of nervous system | 7.39e-09 | 2 |
choroid plexus | 7.39e-09 | 2 |
brain ventricle | 7.39e-09 | 2 |
ventricular system of brain | 7.39e-09 | 2 |
ventricular system of central nervous system | 7.39e-09 | 2 |
brain vasculature | 1.54e-07 | 5 |