UBERON:0010077: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0010077
|name=cuboidal epithelium
|namespace=
|def=
|xref=ncithesaurus:Cuboidal_Epithelium
|is_a=UBERON:0000483
|synonym=
|comment=AO notes: in NCI...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=AO notes: in NCIT this is glandular | |comment=AO notes: in NCIT this is glandular | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010077 | |||
|is_a=UBERON:0000483 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=cuboidal epithelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref=ncithesaurus:Cuboidal_Epithelium | |||
}} | }} | ||
Latest revision as of 18:07, 12 September 2014
| Name: | cuboidal epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Comments: | AO notes: in NCIT this is glandular |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium) |
|---|
Children
| is a: | UBERON:0000484 (simple cuboidal epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010077 (cuboidal epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.41e-88 | FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_87d613a6233da88d2a452f832bb43e1b | p1@CRYBB3 |
| 1.41e-88 | FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_87d613a6233da88d2a452f832bb43e1b | p1@CRYBB3 |
| 3.32e-74 | FFCP PHASE2:Hg19::chr22:25615600..25615611,+#_e387c0581b12d408ac0027aa1340882a | p1@CRYBB2 |
| 3.32e-74 | FFCP PHASE1:Hg19::chr22:25615600..25615611,+#_e387c0581b12d408ac0027aa1340882a | p1@CRYBB2 |
| 5.48e-74 | FFCP PHASE2:Hg19::chr19:51891222..51891233,-#_9d596227366d3210aaafd8ca03c45c64 | p1@LIM2 |
| 5.48e-74 | FFCP PHASE1:Hg19::chr19:51891222..51891233,-#_9d596227366d3210aaafd8ca03c45c64 | p1@LIM2 |
| 3.8e-56 | FFCP PHASE1:Hg19::chr22:27017921..27017928,+#_9a4ec77b2c3681d8e641109b9f9284ea | p1@CRYBA4 |
| 3.8e-56 | FFCP PHASE2:Hg19::chr22:27017921..27017928,+#_9a4ec77b2c3681d8e641109b9f9284ea | p1@CRYBA4 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:104778247..104778293,+#_17c788988f30f0b1f41bf0d0f4a66151 | p@chr13:104778247..104778293, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:104778247..104778293,+#_17c788988f30f0b1f41bf0d0f4a66151 | p@chr13:104778247..104778293, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr20:61204240..61204241,+#_17c788988f30f0b1f41bf0d0f4a66151 | p@chr20:61204240..61204241, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:61204240..61204241,+#_17c788988f30f0b1f41bf0d0f4a66151 | p@chr20:61204240..61204241, + |
| 5.14e-50 | FFCP PHASE1:Hg19::chr21:44592820..44592840,-#_c511136a68c1818b5503660b3f475305 | p2@CU686889 |
| 5.14e-50 | FFCP PHASE1:Hg19::chr14:37642016..37642022,-#_c511136a68c1818b5503660b3f475305 | p7@SLC25A21 |
| 5.14e-50 | FFCP PHASE2:Hg19::chr14:37642016..37642022,-#_c511136a68c1818b5503660b3f475305 | p7@SLC25A21 |
| 5.14e-50 | FFCP PHASE2:Hg19::chr21:44592820..44592840,-#_c511136a68c1818b5503660b3f475305 | p2@CU686889 |
| 6.6e-50 | FFCP PHASE2:Hg19::chr21:44592842..44592867,-#_10285a9a3567411e1a6def0f5c8035de | p1@CU686889 |
| 6.6e-50 | FFCP PHASE2:Hg19::chr12:132475501..132475504,+#_10285a9a3567411e1a6def0f5c8035de | p@chr12:132475501..132475504, + |
| 6.6e-50 | FFCP PHASE1:Hg19::chr12:132475501..132475504,+#_10285a9a3567411e1a6def0f5c8035de | p@chr12:132475501..132475504, + |
| 6.6e-50 | FFCP PHASE2:Hg19::chr21:44589339..44589372,-#_10285a9a3567411e1a6def0f5c8035de | p@chr21:44589339..44589372, - |
| 6.6e-50 | FFCP PHASE1:Hg19::chr21:44592842..44592867,-#_10285a9a3567411e1a6def0f5c8035de | p1@CU686889 |
| 6.6e-50 | FFCP PHASE1:Hg19::chr21:44589339..44589372,-#_10285a9a3567411e1a6def0f5c8035de | p@chr21:44589339..44589372, - |
| 6.27e-44 | FFCP PHASE2:Hg19::chr11:31827535..31827565,-#_aef441c90c101ba87a27224fa527e270 | p11@PAX6 |
| 6.27e-44 | FFCP PHASE1:Hg19::chr11:31827535..31827565,-#_aef441c90c101ba87a27224fa527e270 | p11@PAX6 |
| 1.92e-41 | FFCP PHASE1:Hg19::chr3:186262166..186262170,-#_25261972c72c60411d6f96a602c1b11d | p1@CRYGS |
| 1.92e-41 | FFCP PHASE2:Hg19::chr3:186262166..186262170,-#_25261972c72c60411d6f96a602c1b11d | p1@CRYGS |
| 4.94e-40 | FFCP PHASE1:Hg19::chr5:112173525..112173532,+#_7b3a00d4d408abfc6fe12070663d5c16 | p@chr5:112173525..112173532, + |
| 4.94e-40 | FFCP PHASE2:Hg19::chr5:112173525..112173532,+#_7b3a00d4d408abfc6fe12070663d5c16 | p@chr5:112173525..112173532, + |
| 1.62e-37 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_98c950c7c4cda382276364d5b7dcac9a | p7@PTPRU |
| 1.62e-37 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_98c950c7c4cda382276364d5b7dcac9a | p7@PTPRU |
| 2.1e-35 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_c36315ecc8e82319854c300ef3af29d3 | p3@SIX6 |
| 2.1e-35 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_c36315ecc8e82319854c300ef3af29d3 | p3@SIX6 |
| 6.73e-35 | FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_53723211f256c2eebb04c7007d956bd4 | p4@SIX6 |
| 6.73e-35 | FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_53723211f256c2eebb04c7007d956bd4 | p4@SIX6 |
| 5.06e-34 | FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_08c78aeb55416f8d3bb571ec83f9a666 | p@chr11:31667372..31667383, - |
| 5.06e-34 | FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_08c78aeb55416f8d3bb571ec83f9a666 | p@chr11:31667372..31667383, - |
| 8.36e-34 | FFCP PHASE1:Hg19::chr19:1470631..1470648,-#_ee2f58e8ccb6a5d9ba099e8b7cc79bb5 | p@chr19:1470631..1470648, - |
| 8.36e-34 | FFCP PHASE2:Hg19::chr19:1470631..1470648,-#_ee2f58e8ccb6a5d9ba099e8b7cc79bb5 | p@chr19:1470631..1470648, - |
| 5.55e-33 | FFCP PHASE2:Hg19::chr21:44589135..44589151,+#_368708ca725f35814601821649df8aff | p1@CRYAA |
| 5.55e-33 | FFCP PHASE1:Hg19::chr21:44589135..44589151,+#_368708ca725f35814601821649df8aff | p1@CRYAA |
| 9.55e-33 | FFCP PHASE2:Hg19::chr17:27573875..27573878,+#_b71fed6f7b5afcd82ea45f720bedbfa9 | p1@CRYBA1 |
| 9.55e-33 | FFCP PHASE1:Hg19::chr17:27573875..27573878,+#_b71fed6f7b5afcd82ea45f720bedbfa9 | p1@CRYBA1 |
| 2.74e-29 | FFCP PHASE2:Hg19::chr2:45168589..45168601,-#_d240d260ef773c954b672aa4298cd72f | p2@ENST00000456467 |
| 2.74e-29 | FFCP PHASE1:Hg19::chr2:45168589..45168601,-#_d240d260ef773c954b672aa4298cd72f | p2@ENST00000456467 |
| 3.65e-29 | FFCP PHASE2:Hg19::chr7:107883678..107883689,-#_29c5da89a348d88b2de169b1022992b4 | p13@NRCAM |
| 3.65e-29 | FFCP PHASE1:Hg19::chr7:107883678..107883689,-#_29c5da89a348d88b2de169b1022992b4 | p13@NRCAM |
| 7.46e-29 | FFCP PHASE1:Hg19::chr13:114202163..114202178,+#_904e2c55774bebf46b386b2df1a30cdc | p@chr13:114202163..114202178, + |
| 7.46e-29 | FFCP PHASE2:Hg19::chr13:114202163..114202178,+#_904e2c55774bebf46b386b2df1a30cdc | p@chr13:114202163..114202178, + |
| 1.36e-28 | FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_8bd174efa4f4001dd34b446a6fe6ac04 | p10@NLGN1 |
| 1.36e-28 | FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_8bd174efa4f4001dd34b446a6fe6ac04 | p10@NLGN1 |
| 2.64e-27 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_458de518f67527723c0e76d1958cb135 | p10@SIX3 |
| 2.64e-27 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_458de518f67527723c0e76d1958cb135 | p10@SIX3 |
| 8.39e-27 | FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_07cd2690850dea9534574b38bd616071 | p2@SIX6 |
| 8.39e-27 | FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_07cd2690850dea9534574b38bd616071 | p2@SIX6 |
| 5.56e-26 | FFCP PHASE2:Hg19::chrX:43587410..43587413,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chrX:43587410..43587413, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr19:40920692..40920700,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr19:40920692..40920700, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr1:147374915..147374932,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p1@GJA8 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr3:150690809..150690822,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p3@CLRN1 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr20:35861148..35861151,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr20:35861148..35861151, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chrX:43587410..43587413,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chrX:43587410..43587413, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr9:75848662..75848671,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr9:75848662..75848671, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr1:147374915..147374932,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p1@GJA8 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr19:40920692..40920700,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr19:40920692..40920700, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr20:35861148..35861151,+#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr20:35861148..35861151, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr3:150690809..150690822,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p3@CLRN1 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:75848662..75848671,-#_3f977e2aee0d5d1bcdd9601e58afbfa5 | p@chr9:75848662..75848671, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr12:56848437..56848442,-#_78837f5820cfc47694358cc1f4b38949 | p1@MIP |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:36253916..36253918,-#_78837f5820cfc47694358cc1f4b38949 | p@chr21:36253916..36253918, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr5:124468141..124468176,-#_78837f5820cfc47694358cc1f4b38949 | p@chr5:124468141..124468176, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_78837f5820cfc47694358cc1f4b38949 | p30@PDP1 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr13:44875179..44875188,-#_78837f5820cfc47694358cc1f4b38949 | p@chr13:44875179..44875188, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:44592788..44592807,+#_78837f5820cfc47694358cc1f4b38949 | p@chr21:44592788..44592807, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr11:65361417..65361421,-#_78837f5820cfc47694358cc1f4b38949 | p2@KCNK7 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:10538258..10538282,+#_78837f5820cfc47694358cc1f4b38949 | p@chr2:10538258..10538282, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr1:86064794..86064797,+#_78837f5820cfc47694358cc1f4b38949 | p1@ENST00000426794 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr11:65361417..65361421,-#_78837f5820cfc47694358cc1f4b38949 | p2@KCNK7 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr3:156322310..156322314,-#_78837f5820cfc47694358cc1f4b38949 | p@chr3:156322310..156322314, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr5:45038620..45038622,+#_78837f5820cfc47694358cc1f4b38949 | p@chr5:45038620..45038622, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:41727698..41727705,+#_78837f5820cfc47694358cc1f4b38949 | p@chr19:41727698..41727705, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr7:123198284..123198329,-#_78837f5820cfc47694358cc1f4b38949 | p3@NDUFA5 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592626..44592635,-#_78837f5820cfc47694358cc1f4b38949 | p5@CU686889 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr16:17563573..17563582,+#_78837f5820cfc47694358cc1f4b38949 | p@chr16:17563573..17563582, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr2:693025..693036,+#_78837f5820cfc47694358cc1f4b38949 | p@chr2:693025..693036, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:17563573..17563582,+#_78837f5820cfc47694358cc1f4b38949 | p@chr16:17563573..17563582, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_78837f5820cfc47694358cc1f4b38949 | p30@PDP1 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr19:17137781..17137792,-#_78837f5820cfc47694358cc1f4b38949 | p6@CPAMD8 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr9:100057272..100057276,+#_78837f5820cfc47694358cc1f4b38949 | p@chr9:100057272..100057276, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr5:464155..464205,+#_78837f5820cfc47694358cc1f4b38949 | p@chr5:464155..464205, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr13:72440726..72440736,-#_78837f5820cfc47694358cc1f4b38949 | p19@DACH1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:85617064..85617073,-#_78837f5820cfc47694358cc1f4b38949 | p@chr16:85617064..85617073, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:44592512..44592521,+#_78837f5820cfc47694358cc1f4b38949 | p@chr21:44592512..44592521, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592750..44592758,-#_78837f5820cfc47694358cc1f4b38949 | p4@CU686889 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr4:140656282..140656285,-#_78837f5820cfc47694358cc1f4b38949 | p@chr4:140656282..140656285, - |
| 7.14e-26 | FFCP PHASE1:Hg19::chr21:36253916..36253918,-#_78837f5820cfc47694358cc1f4b38949 | p@chr21:36253916..36253918, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr13:72440726..72440736,-#_78837f5820cfc47694358cc1f4b38949 | p19@DACH1 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr19:41727698..41727705,+#_78837f5820cfc47694358cc1f4b38949 | p@chr19:41727698..41727705, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr1:45769711..45769721,-#_78837f5820cfc47694358cc1f4b38949 | p@chr1:45769711..45769721, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr20:33903184..33903189,-#_78837f5820cfc47694358cc1f4b38949 | p11@UQCC |
| 7.14e-26 | FFCP PHASE2:Hg19::chr21:44592358..44592365,+#_78837f5820cfc47694358cc1f4b38949 | p@chr21:44592358..44592365, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:73406056..73406065,+#_78837f5820cfc47694358cc1f4b38949 | p@chr10:73406056..73406065, + |
