UBERON:0003978: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003978
|name=valve
|namespace=
|def=
|xref=EHDAA:1892;;EHDAA:4406;;EHDAA2:0004046;;FMA:67611;;galen:Valve;;OpenCyc:Mx4rvqiwE5wpEbGdrcN5Y29ycA
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|anatomical_img_id=FMA:67611 | |||
| | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003978 | |||
|is_a=UBERON:0000064 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=valve | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset=grouping_class | |||
|synonym="anatomical valve" EXACT [FMA:67611] | |||
|union_of= | |||
|xref=EHDAA2:0004046;;EHDAA:1892;;EHDAA:4406;;FMA:67611;;galen:Valve;;OpenCyc:Mx4rvqiwE5wpEbGdrcN5Y29ycA | |||
}} | }} | ||
Latest revision as of 17:42, 12 September 2014
| Name: | valve | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: | "anatomical valve" EXACT [FMA:67611] | ||
| Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part) |
|---|
Children
| is a: | UBERON:0000946 (cardial valve),UBERON:0005208 (right atrium valve) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10205-103F7 (heart - mitral valve, adult)
- 10206-103F8 (heart - pulmonic valve, adult)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003978 (valve), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.41e-147 | FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_8f3a779bf31cc77e3a5dd86f6b4f9bb5 | p@chr7:25815812..25815822, - |
| 5.41e-147 | FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_8f3a779bf31cc77e3a5dd86f6b4f9bb5 | p@chr7:25815812..25815822, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_7f0d88dde0c6f168cb2ce2ba2b9f54c6 | p@chr12:3373147..3373149, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_7f0d88dde0c6f168cb2ce2ba2b9f54c6 | p@chr12:3373147..3373149, - |
| 7.78e-118 | FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_8c65d2afab226724754bf8f42eaea5ae | p@chr1:20355975..20355980, - |
| 7.78e-118 | FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_8c65d2afab226724754bf8f42eaea5ae | p@chr1:20355975..20355980, - |
| 5.69e-99 | FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_5d5a5285d4a526372c303da414fa55a4 | p@chr1:237331032..237331036, + |
| 5.69e-99 | FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_5d5a5285d4a526372c303da414fa55a4 | p@chr1:237331032..237331036, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_1d1ad678968810c49c1e6951103b165b | p@chr2:18116344..18116353, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_1d1ad678968810c49c1e6951103b165b | p@chr6:6739548..6739577, - |
| 1.52e-87 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_1d1ad678968810c49c1e6951103b165b | p9@NPPA |
| 1.52e-87 | FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_1d1ad678968810c49c1e6951103b165b | p@chr6:6739548..6739577, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_1d1ad678968810c49c1e6951103b165b | p@chr2:18116344..18116353, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_1d1ad678968810c49c1e6951103b165b | p9@NPPA |
| 7.21e-85 | FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_548fbb212d2a374b14c8f5bc0aae7ad9 | p@chrX:112324334..112324339, - |
| 7.21e-85 | FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_548fbb212d2a374b14c8f5bc0aae7ad9 | p@chrX:112324334..112324339, - |
| 1.71e-84 | FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_7f215da3e77d0318e7690b0b67978ed6 | p11@SLC4A3 |
| 1.71e-84 | FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_7f215da3e77d0318e7690b0b67978ed6 | p11@SLC4A3 |
| 2.27e-84 | FFCP PHASE2:Hg19::chr2:179533457..179533461,-#_1e199081556861ed3e3523ed5a62fe48 | p@chr2:179533457..179533461, - |
| 2.27e-84 | FFCP PHASE1:Hg19::chr2:179533457..179533461,-#_1e199081556861ed3e3523ed5a62fe48 | p@chr2:179533457..179533461, - |
| 3.03e-84 | FFCP PHASE2:Hg19::chr2:179398102..179398109,-#_e0624e8dc1c4e426a00dd7757f3bdb02 | p@chr2:179398102..179398109, - |
| 3.03e-84 | FFCP PHASE1:Hg19::chr2:179398102..179398109,-#_e0624e8dc1c4e426a00dd7757f3bdb02 | p@chr2:179398102..179398109, - |
| 7.81e-75 | FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_54c4dc3a1c1ebdf22f2e573fbf126963 | p@chr5:123739302..123739319, - |
| 7.81e-75 | FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_54c4dc3a1c1ebdf22f2e573fbf126963 | p@chr5:123739302..123739319, - |
| 1.01e-74 | FFCP PHASE2:Hg19::chr18:64271475..64271484,-#_3e36ec673197fdb8e510b93fe578e10a | p6@CDH19 |
| 1.01e-74 | FFCP PHASE1:Hg19::chr18:64271475..64271484,-#_3e36ec673197fdb8e510b93fe578e10a | p6@CDH19 |
| 1.29e-74 | FFCP PHASE2:Hg19::chr7:35286774..35286778,-#_9fe127e86a153119b3a0390fa7c58f07 | p@chr7:35286774..35286778, - |
| 1.29e-74 | FFCP PHASE1:Hg19::chr7:35286774..35286778,-#_9fe127e86a153119b3a0390fa7c58f07 | p@chr7:35286774..35286778, - |
| 1.66e-74 | FFCP PHASE2:Hg19::chr6:129355052..129355056,+#_f8285cee66607152d143821173a93eee | p@chr6:129355052..129355056, + |
| 1.66e-74 | FFCP PHASE1:Hg19::chr6:129355052..129355056,+#_f8285cee66607152d143821173a93eee | p@chr6:129355052..129355056, + |
| 2.75e-74 | FFCP PHASE2:Hg19::chr3:16940540..16940554,+#_8dfd7ad1add31cd81daba17474f0e5b2 | p@chr3:16940540..16940554, + |
| 2.75e-74 | FFCP PHASE1:Hg19::chr3:16940540..16940554,+#_8dfd7ad1add31cd81daba17474f0e5b2 | p@chr3:16940540..16940554, + |
| 3.54e-74 | FFCP PHASE2:Hg19::chr19:55661803..55661807,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr19:55661803..55661807, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr1:201328779..201328797,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr1:201328779..201328797, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr3:131523446..131523459,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr3:131523446..131523459, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr20:33565465..33565475,+#_ec8d255347d9f68cf848f4d14957fe80 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE1:Hg19::chr3:131523446..131523459,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr3:131523446..131523459, - |
| 3.54e-74 | FFCP PHASE2:Hg19::chr1:201328779..201328797,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr1:201328779..201328797, - |
| 3.54e-74 | FFCP PHASE1:Hg19::chr20:33565465..33565475,+#_ec8d255347d9f68cf848f4d14957fe80 | p9@MYH7B |
| 3.54e-74 | FFCP PHASE1:Hg19::chr19:55661803..55661807,-#_ec8d255347d9f68cf848f4d14957fe80 | p@chr19:55661803..55661807, - |
| 5.84e-74 | FFCP PHASE2:Hg19::chr6:36812121..36812130,-#_91e966230f9d2d86688f8b1c023bdfd1 | p@chr6:36812121..36812130, - |
| 5.84e-74 | FFCP PHASE1:Hg19::chr6:36812121..36812130,-#_91e966230f9d2d86688f8b1c023bdfd1 | p@chr6:36812121..36812130, - |
| 7.51e-74 | FFCP PHASE1:Hg19::chr14:105939326..105939337,+#_d8692ff22a795fd0add32fc7f50867dc | p16@CRIP2 |
| 7.51e-74 | FFCP PHASE2:Hg19::chr14:105939326..105939337,+#_d8692ff22a795fd0add32fc7f50867dc | p16@CRIP2 |
| 9.64e-74 | FFCP PHASE2:Hg19::chr1:206838422..206838456,+#_1a6106f4308870dbd568177cc47ed59b | p@chr1:206838422..206838456, + |
| 9.64e-74 | FFCP PHASE1:Hg19::chr1:206838422..206838456,+#_1a6106f4308870dbd568177cc47ed59b | p@chr1:206838422..206838456, + |
| 1.24e-73 | FFCP PHASE1:Hg19::chr1:231983543..231983554,-#_5ad22a6fa941c85b748ac0d704b29bfc | p@chr1:231983543..231983554, - |
| 1.24e-73 | FFCP PHASE2:Hg19::chr1:231983543..231983554,-#_5ad22a6fa941c85b748ac0d704b29bfc | p@chr1:231983543..231983554, - |
| 1.54e-66 | FFCP PHASE1:Hg19::chr1:201328328..201328343,-#_7ebfd6be08a356ded527b78a27f1d86b | p@chr1:201328328..201328343, - |
| 1.54e-66 | FFCP PHASE2:Hg19::chr1:201328328..201328343,-#_7ebfd6be08a356ded527b78a27f1d86b | p@chr1:201328328..201328343, - |
| 1.71e-66 | FFCP PHASE2:Hg19::chr11:47367243..47367257,-#_36afdf4524aa64161e4496594ec88c57 | p@chr11:47367243..47367257, - |
| 1.71e-66 | FFCP PHASE1:Hg19::chr1:237214095..237214115,+#_36afdf4524aa64161e4496594ec88c57 | p@chr1:237214095..237214115, + |
| 1.71e-66 | FFCP PHASE2:Hg19::chr1:237214095..237214115,+#_36afdf4524aa64161e4496594ec88c57 | p@chr1:237214095..237214115, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr11:47367243..47367257,-#_36afdf4524aa64161e4496594ec88c57 | p@chr11:47367243..47367257, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_9289084430b6e60c47aef956deb3b0db | p@chr10:92678409..92678410, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_9289084430b6e60c47aef956deb3b0db | p@chr15:86272097..86272099, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_9289084430b6e60c47aef956deb3b0db | p@chr10:92678409..92678410, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_9289084430b6e60c47aef956deb3b0db | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_9289084430b6e60c47aef956deb3b0db | p@chr5:99390735..99390743, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_9289084430b6e60c47aef956deb3b0db | p@chr15:86272097..86272099, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_0fc485ca20bf34365507a2f34bbdf275 | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr2:159976509..159976519,+#_0fc485ca20bf34365507a2f34bbdf275 | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr2:159976509..159976519,+#_0fc485ca20bf34365507a2f34bbdf275 | p@chr2:159976509..159976519, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_0fc485ca20bf34365507a2f34bbdf275 | p@chr12:4735761..4735787, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_0fc485ca20bf34365507a2f34bbdf275 | p@chr12:114886577..114886589, - |
| 2.4e-66 | FFCP PHASE1:Hg19::chr1:237996521..237996532,+#_0fc485ca20bf34365507a2f34bbdf275 | p@chr1:237996521..237996532, + |
| 2.4e-66 | FFCP PHASE2:Hg19::chr1:237996521..237996532,+#_0fc485ca20bf34365507a2f34bbdf275 | p@chr1:237996521..237996532, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_0fc485ca20bf34365507a2f34bbdf275 | p@chr12:4735761..4735787, - |
| 2.41e-66 | FFCP PHASE2:Hg19::chr1:237207955..237207959,+#_4b0da3522f9795ae5a55f2494d0b4d51 | p@chr1:237207955..237207959, + |
| 2.41e-66 | FFCP PHASE2:Hg19::chr2:40480968..40480972,-#_4b0da3522f9795ae5a55f2494d0b4d51 | p@chr2:40480968..40480972, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr2:40480968..40480972,-#_4b0da3522f9795ae5a55f2494d0b4d51 | p@chr2:40480968..40480972, - |
| 2.41e-66 | FFCP PHASE1:Hg19::chr1:237207955..237207959,+#_4b0da3522f9795ae5a55f2494d0b4d51 | p@chr1:237207955..237207959, + |
| 3.01e-66 | FFCP PHASE2:Hg19::chr4:62999501..62999517,+#_0c0c84cf3677e6ead743acd91f197db6 | p@chr4:62999501..62999517, + |
| 3.01e-66 | FFCP PHASE1:Hg19::chr4:62999501..62999517,+#_0c0c84cf3677e6ead743acd91f197db6 | p@chr4:62999501..62999517, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:35253487..35253489,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr9:38650254..38650266,+#_7c9eb1db8f43a2700bf504d273522c31 | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr7:44178491..44178498, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:35253487..35253489,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr7:35253487..35253489, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr7:44178491..44178498, - |
| 3.35e-66 | FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_7c9eb1db8f43a2700bf504d273522c31 | p2@MYL7 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr9:38650254..38650266,+#_7c9eb1db8f43a2700bf504d273522c31 | p@chr9:38650254..38650266, + |
| 3.35e-66 | FFCP PHASE2:Hg19::chr5:65736120..65736128,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr5:65736120..65736128, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_7c9eb1db8f43a2700bf504d273522c31 | p2@MYL7 |
| 3.35e-66 | FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr1:11905830..11905839, - |
| 3.35e-66 | FFCP PHASE1:Hg19::chr5:65736120..65736128,-#_7c9eb1db8f43a2700bf504d273522c31 | p@chr5:65736120..65736128, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_d256ddfc08b59fda6b600d036fc22e35 | p3@MYL7 |
| 4.68e-66 | FFCP PHASE1:Hg19::chr10:112524543..112524547,+#_d256ddfc08b59fda6b600d036fc22e35 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr10:112524543..112524547,+#_d256ddfc08b59fda6b600d036fc22e35 | p@chr10:112524543..112524547, + |
| 4.68e-66 | FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_d256ddfc08b59fda6b600d036fc22e35 | p3@MYL7 |
| 5.88e-66 | FFCP PHASE2:Hg19::chr6:36812225..36812238,-#_901b4d41b1fafd6ff642a4a0a9675e6e | p@chr6:36812225..36812238, - |
| 5.88e-66 | FFCP PHASE1:Hg19::chr6:36812225..36812238,-#_901b4d41b1fafd6ff642a4a0a9675e6e | p@chr6:36812225..36812238, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr4:62999459..62999462,+#_f88deb27627a203e6a237c440a3fc8d2 | p@chr4:62999459..62999462, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr2:168104544..168104551,+#_f88deb27627a203e6a237c440a3fc8d2 | p52@XIRP2 |
| 6.53e-66 | FFCP PHASE1:Hg19::chr2:168104544..168104551,+#_f88deb27627a203e6a237c440a3fc8d2 | p52@XIRP2 |
| 6.53e-66 | FFCP PHASE2:Hg19::chr4:62999459..62999462,+#_f88deb27627a203e6a237c440a3fc8d2 | p@chr4:62999459..62999462, + |
| 1.15e-65 | FFCP PHASE1:Hg19::chr10:127569398..127569410,-#_055ece4df3a362bddd27ceb54849f0c8 | p5@DHX32 |
| 1.15e-65 | FFCP PHASE1:Hg19::chrX:121555838..121555874,+#_055ece4df3a362bddd27ceb54849f0c8 | p@chrX:121555838..121555874, + |
| 1.15e-65 | FFCP PHASE1:Hg19::chr7:123302841..123302854,+#_055ece4df3a362bddd27ceb54849f0c8 | p@chr7:123302841..123302854, + |
| 1.15e-65 | FFCP PHASE2:Hg19::chr7:123302841..123302854,+#_055ece4df3a362bddd27ceb54849f0c8 | p@chr7:123302841..123302854, + |
