UBERON:0001917: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001917
|name=endothelium of artery
|namespace=
|def="An endothelium that is part of an artery [Obol]." [OBOL:automatic]
|xref=AAO:0011013;;BTO:000475...") |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_62116-MA_0000707-XAO_0000357 | ||
|comment=This class was created automatically from a combination of ontologies | |comment=This class was created automatically from a combination of ontologies | ||
|created_by= | |created_by= | ||
| | |def="An endothelium that is part of an artery [Obol]." [OBOL:automatic] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001917 | |||
|is_a=UBERON:0003915 ;;UBERON:0004638 ;;UBERON:0004700 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=endothelium of artery | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001637 | |part_of=UBERON:0001637 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "The endothelium is the thin layer of cells that lines the interior surface of blood vessels, forming an interface between circulating blood in the lumen and the rest of the vessel wall.[AAO]" xsd:string | |||
|subset= | |||
|synonym="arterial endothelium" EXACT [];;"artery endothelium" EXACT [] | |||
|union_of= | |||
|xref=AAO:0011013;;BTO:0004757;;FMA:62116;;MA:0000707;;ncithesaurus:Artery_Endothelium;;VHOG:0001215;;XAO:0000357 | |||
}} | }} | ||
Latest revision as of 17:23, 12 September 2014
| Name: | endothelium of artery | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endothelium that is part of an artery [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"arterial endothelium" EXACT [] "artery endothelium" EXACT [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_62116-MA_0000707-XAO_0000357 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003915(endothelial tube),UBERON:0004638(blood vessel endothelium),UBERON:0004700(arterial system endothelium) |
|---|---|
| part_of: | UBERON:0001637(artery) |
Children
| develops from: | UBERON:0005805 (dorsal aorta) |
|---|---|
| part of: | CL:1000413 (endothelial cell of artery) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
- 11343-117G2 (Endothelial Cells - Thoracic, donor2)
- 11412-118E8 (Endothelial Cells - Aortic, donor3)
- 11413-118E9 (Endothelial Cells - Artery, donor3)
- 11415-118F2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001917 (endothelium of artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.95e-97 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_c0c5e32634d916cdd0777ffa59b2ec55 | p12@PARP12 |
| 5.95e-97 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_c0c5e32634d916cdd0777ffa59b2ec55 | p12@PARP12 |
| 2.32e-85 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_f33380f12a3702230f05625df977291f | p4@EIF2B2 |
| 2.32e-85 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_f33380f12a3702230f05625df977291f | p4@EIF2B2 |
| 1.21e-84 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_9fbc706d0603473098432ad446353d99 | p5@PARP12 |
| 1.21e-84 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_9fbc706d0603473098432ad446353d99 | p5@PARP12 |
| 4.66e-84 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_d980125c8abf6cea79390518a78a85ce | p@chr18:33046982..33046991, - |
| 4.66e-84 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_d980125c8abf6cea79390518a78a85ce | p@chr18:33046982..33046991, - |
| 6.47e-78 | FFCP PHASE2:Hg19::chr15:39722548..39722553,+#_83c5c89b83d25e27b9f862195a0ca53e | p@chr15:39722548..39722553, + |
| 6.47e-78 | FFCP PHASE1:Hg19::chr15:39722548..39722553,+#_83c5c89b83d25e27b9f862195a0ca53e | p@chr15:39722548..39722553, + |
| 9.17e-78 | FFCP PHASE2:Hg19::chr1:16076084..16076098,-#_aa02af1e02460e7937d971afde2a4254 | p2@ENST00000418525 |
| 9.17e-78 | FFCP PHASE1:Hg19::chr1:16076084..16076098,-#_aa02af1e02460e7937d971afde2a4254 | p2@ENST00000418525 |
| 9.22e-78 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_17d716f3d8f8c81186ac25cf5a8597cc | p@chr6:78171774..78171792, + |
| 9.22e-78 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_17d716f3d8f8c81186ac25cf5a8597cc | p@chr6:78171774..78171792, + |
| 7.03e-75 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_b45aee06d3b9059453204e88c476befd | p8@GIMAP6 |
| 7.03e-75 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_b45aee06d3b9059453204e88c476befd | p8@GIMAP6 |
| 2.33e-70 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_9fa8cdac2ec7a3dfb3b9c89083f3ab20 | p6@WDFY4 |
| 2.33e-70 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_9fa8cdac2ec7a3dfb3b9c89083f3ab20 | p6@WDFY4 |
| 1.41e-69 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_d28117c315d90808e05869143c5e95e9 | p@chr12:105863705..105863718, + |
| 1.41e-69 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_d28117c315d90808e05869143c5e95e9 | p@chr12:105863705..105863718, + |
| 7.13e-68 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_a6b8b3b86d82ffd2c265d7be8bf00b9b | p@chr18:33047157..33047168, - |
| 7.13e-68 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_a6b8b3b86d82ffd2c265d7be8bf00b9b | p@chr18:33047157..33047168, - |
| 1.55e-67 | FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_69ba71750af23247d68f3cfc0a5a30b4 | p15@HHIP |
| 1.55e-67 | FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_69ba71750af23247d68f3cfc0a5a30b4 | p15@HHIP |
| 3.99e-66 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_dbf7bf94a625a6be9c10561e1e96d0a6 | p@chr6:148664333..148664338, - |
| 3.99e-66 | FFCP PHASE2:Hg19::chr7:81662303..81662321,-#_dbf7bf94a625a6be9c10561e1e96d0a6 | p8@CACNA2D1 |
| 3.99e-66 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_dbf7bf94a625a6be9c10561e1e96d0a6 | p@chr6:148664333..148664338, - |
| 3.99e-66 | FFCP PHASE1:Hg19::chr7:81662303..81662321,-#_dbf7bf94a625a6be9c10561e1e96d0a6 | p8@CACNA2D1 |
| 1.07e-63 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_be21be85be7d50339ae77f72e4d9e255 | p1@MIR216A |
| 1.07e-63 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_be21be85be7d50339ae77f72e4d9e255 | p1@MIR216A |
| 2.57e-63 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_8cdfa905a3bf9caff7924132ee9eec61 | p7@WDFY4 |
| 2.57e-63 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_8cdfa905a3bf9caff7924132ee9eec61 | p7@WDFY4 |
| 4.08e-63 | FFCP PHASE2:Hg19::chr9:72118013..72118052,-#_4165abbf68e8f84953666c481b746d84 | p@chr9:72118013..72118052, - |
| 4.08e-63 | FFCP PHASE1:Hg19::chr9:72118013..72118052,-#_4165abbf68e8f84953666c481b746d84 | p@chr9:72118013..72118052, - |
| 2.64e-61 | FFCP PHASE2:Hg19::chr4:5035083..5035101,-#_b7cc8068c18b27fdd40b036a819c67e2 | p@chr4:5035083..5035101, - |
| 2.64e-61 | FFCP PHASE1:Hg19::chr4:5035083..5035101,-#_b7cc8068c18b27fdd40b036a819c67e2 | p@chr4:5035083..5035101, - |
| 8.67e-61 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_80c9e254498691b815457a147ee326d8 | p@chr11:124761247..124761258, - |
| 8.67e-61 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_80c9e254498691b815457a147ee326d8 | p@chr11:124761247..124761258, - |
| 1.6e-60 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_b41683c298567a3de4e4f5e6d38daca6 | p2@BMX |
| 1.6e-60 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_b41683c298567a3de4e4f5e6d38daca6 | p2@BMX |
| 2.52e-60 | FFCP PHASE2:Hg19::chr14:75422409..75422422,+#_47874b53b195cf5340e5055ac75135a8 | p@chr14:75422409..75422422, + |
| 2.52e-60 | FFCP PHASE1:Hg19::chr14:75422409..75422422,+#_47874b53b195cf5340e5055ac75135a8 | p@chr14:75422409..75422422, + |
| 1.11e-59 | FFCP PHASE1:Hg19::chr11:71640112..71640119,+#_7a8abacb0e71143fcc885f082c9eb517 | p3@RNF121 |
| 1.11e-59 | FFCP PHASE2:Hg19::chr11:71640112..71640119,+#_7a8abacb0e71143fcc885f082c9eb517 | p3@RNF121 |
| 3.78e-59 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_82fa5fb8dca178e37f8246e3fe6afa86 | p12@KSR2 |
| 3.78e-59 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_82fa5fb8dca178e37f8246e3fe6afa86 | p12@KSR2 |
| 2.5e-58 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_0fa82b4609d485016f56a48a9b0cf09b | p1@ENST00000513158 |
| 2.5e-58 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_0fa82b4609d485016f56a48a9b0cf09b | p1@ENST00000513158 |
| 6.73e-58 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_b5fa1a9977b7f05839ebbcbdae7e3dab | p@chr12:105863636..105863650, + |
| 6.73e-58 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_b5fa1a9977b7f05839ebbcbdae7e3dab | p@chr12:105863636..105863650, + |
| 8.2e-58 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_c6416f094894b1bda63b490fa4c49c67 | p@chr9:139543390..139543404, + |
| 8.2e-58 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_c6416f094894b1bda63b490fa4c49c67 | p@chr9:139543390..139543404, + |
| 1.9e-56 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_0edb0871f5de0c8d8c160ea330ab3751 | p@chrX:71299684..71299699, + |
| 1.9e-56 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_0edb0871f5de0c8d8c160ea330ab3751 | p@chrX:71299684..71299699, + |
| 2.07e-56 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_deee776fdc12933055c3c3a29d79d453 | p1@ENST00000418525 |
| 2.07e-56 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_deee776fdc12933055c3c3a29d79d453 | p1@ENST00000418525 |
| 1.05e-54 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_dab61be0d38c7d373e1584fa4971d6b0 | p@chr6:11607864..11607875, + |
| 1.05e-54 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_dab61be0d38c7d373e1584fa4971d6b0 | p@chr6:11607864..11607875, + |
| 1.58e-54 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_1420557ef3a33f3b17c6fdeda4924a2e | p6@CLEC14A |
| 1.58e-54 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_1420557ef3a33f3b17c6fdeda4924a2e | p6@CLEC14A |
| 2.45e-54 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_e0f78c49c47b73519ea1966f1121cdf4 | p@chr1:22264210..22264241, + |
| 2.45e-54 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_e0f78c49c47b73519ea1966f1121cdf4 | p@chr1:22264210..22264241, + |
| 3.02e-54 | FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_a240d18ba7561ec62cc0087abbc4bbaa | p@chr11:57543275..57543296, + |
| 3.02e-54 | FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_a240d18ba7561ec62cc0087abbc4bbaa | p@chr11:57543275..57543296, + |
| 1.83e-53 | FFCP PHASE2:Hg19::chr5:141337686..141337697,-#_a6fbb99e15f9f780a63f3bbe1458d432 | p2@PCDH12 |
| 1.83e-53 | FFCP PHASE1:Hg19::chr5:141337686..141337697,-#_a6fbb99e15f9f780a63f3bbe1458d432 | p2@PCDH12 |
| 1.53e-52 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_eee9f49b2908b1954407fdb6eb8cc393 | p4@FAM124B |
| 1.53e-52 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_eee9f49b2908b1954407fdb6eb8cc393 | p4@FAM124B |
| 2.14e-52 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_63699efa34f7edb88a5a606f34370462 | p@chr6:3753188..3753192, - |
| 2.14e-52 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_63699efa34f7edb88a5a606f34370462 | p@chr6:3753188..3753192, - |
| 2.19e-52 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_fafc48feacafe55c9ffbcbf8ebc5fe1d | p@chr6:78171746..78171769, + |
| 2.19e-52 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_fafc48feacafe55c9ffbcbf8ebc5fe1d | p@chr6:78171746..78171769, + |
| 2.46e-52 | FFCP PHASE2:Hg19::chr12:52300746..52300751,+#_d85672c9303dae8bd04fa240d46321e0 | p10@ACVRL1 |
| 2.46e-52 | FFCP PHASE1:Hg19::chr12:52300746..52300751,+#_d85672c9303dae8bd04fa240d46321e0 | p10@ACVRL1 |
| 2.89e-51 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_096fc37aeb1666d459fdff64d510f024 | p11@MANSC1 |
| 2.89e-51 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_096fc37aeb1666d459fdff64d510f024 | p11@MANSC1 |
| 1.07e-50 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_b5fb103a65c4682ce23c5d04f6d785fa | p5@ICAM2 |
| 1.07e-50 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_b5fb103a65c4682ce23c5d04f6d785fa | p5@ICAM2 |
| 1.43e-50 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_103106c8183a6ca73bfdcca49b2f29c4 | p5@CLEC14A |
| 1.43e-50 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_103106c8183a6ca73bfdcca49b2f29c4 | p5@CLEC14A |
| 1.7e-50 | FFCP PHASE2:Hg19::chr7:134779508..134779514,-#_3ff168f77f28a7983d2fffedd6169fe6 | p@chr7:134779508..134779514, - |
| 1.7e-50 | FFCP PHASE1:Hg19::chr7:134779508..134779514,-#_3ff168f77f28a7983d2fffedd6169fe6 | p@chr7:134779508..134779514, - |
| 2.79e-50 | FFCP PHASE2:Hg19::chrX:107068687..107068703,+#_203b4fa7d9ae3e56d3e7c4b92d60f453 | p6@MID2 |
| 2.79e-50 | FFCP PHASE1:Hg19::chrX:107068687..107068703,+#_203b4fa7d9ae3e56d3e7c4b92d60f453 | p6@MID2 |
| 2.88e-49 | FFCP PHASE2:Hg19::chr4:85791667..85791699,-#_fcd563a195da0d7a9eba61d15f994deb | p@chr4:85791667..85791699, - |
| 2.88e-49 | FFCP PHASE1:Hg19::chr4:85791667..85791699,-#_fcd563a195da0d7a9eba61d15f994deb | p@chr4:85791667..85791699, - |
| 1.86e-48 | FFCP PHASE2:Hg19::chr6:132455180..132455197,+#_25c43d77436c323bae413e1d0b5c95b1 | p2@LOC100507254 |
| 1.86e-48 | FFCP PHASE1:Hg19::chr6:132455180..132455197,+#_25c43d77436c323bae413e1d0b5c95b1 | p2@LOC100507254 |
| 2.08e-48 | FFCP PHASE2:Hg19::chr6:132455340..132455352,+#_0edc94b2b414662c51aeaa833d5352e1 | p3@ENST00000443303 |
| 2.08e-48 | FFCP PHASE1:Hg19::chr6:132455340..132455352,+#_0edc94b2b414662c51aeaa833d5352e1 | p3@ENST00000443303 |
| 2.61e-48 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_ebcb0ba78052fb80870a42b2e9c84ab7 | p11@UIMC1 |
| 2.61e-48 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_ebcb0ba78052fb80870a42b2e9c84ab7 | p11@UIMC1 |
| 4.28e-48 | FFCP PHASE2:Hg19::chr3:168959838..168959856,+#_447ef4f23a43647533f4eacbea3f0be5 | p@chr3:168959838..168959856, + |
| 4.28e-48 | FFCP PHASE1:Hg19::chr3:168959838..168959856,+#_447ef4f23a43647533f4eacbea3f0be5 | p@chr3:168959838..168959856, + |
| 5.38e-47 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_3c887ec617e1da85ee819801783ab2c9 | p@chr19:41985048..41985050, - |
| 5.38e-47 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_3c887ec617e1da85ee819801783ab2c9 | p@chr19:41985048..41985050, - |
| 1.09e-46 | FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_2cc77ded360bfb1ca68af59884836b89 | p@chr9:139543445..139543462, + |
| 1.09e-46 | FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_2cc77ded360bfb1ca68af59884836b89 | p@chr9:139543445..139543462, + |
| 1.57e-46 | FFCP PHASE2:Hg19::chr6:132455157..132455176,+#_331f7998f79a788fcdb53908acbb8650 | p1@LOC100507254 |
| 1.57e-46 | FFCP PHASE1:Hg19::chr6:132455157..132455176,+#_331f7998f79a788fcdb53908acbb8650 | p1@LOC100507254 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The endothelium is the thin layer of cells that lines the interior surface of blood vessels, forming an interface between circulating blood in the lumen and the rest of the vessel wall.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
