FFCP PHASE1:Mm9::chrX:91782687..91782696,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:91782687..91782696,-
|short_description=p10@Maged1
|description=CAGE_peak_10_at_Maged1_5end
|association_with_transcript=206bp_to_ENSMUST00000138146_5end
...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=94275 | |EntrezGene=94275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=206bp_to_ENSMUST00000138146_5end | |||
|cluster_id=chrX:91782687..91782696,- | |||
|description=CAGE_peak_10_at_Maged1_5end | |||
|id=chrX:91782687..91782696,- | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-13!50;CL:0000393!3.74e-13!39;CL:0000211!3.74e-13!39;CL:0000117!5.02e-12!23;CL:0000337!5.02e-12!23;CL:0000221!9.19e-12!44;CL:0000133!9.19e-12!44;CL:0002319!1.20e-11!43;CL:0000540!1.68e-10!33;CL:0000047!1.68e-10!33;CL:0000031!1.68e-10!33;CL:0000404!1.68e-10!33;CL:0002321!5.83e-08!70;CL:0000220!5.83e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.42e-22,23;CL:0000337,8.42e-22,23;CL:0002319,5.83e-20,43;CL:0000221,2.08e-19,44;CL:0000133,2.08e-19,44;CL:0000393,3.14e-15,39;CL:0000211,3.14e-15,39;CL:0002321,9.45e-15,70;CL:0000540,2.99e-14,33;CL:0000047,2.99e-14,33;CL:0000031,2.99e-14,33;CL:0000404,2.99e-14,33;CL:0000723,2.93e-10,91;CL:0000048,2.93e-10,91;CL:0000034,2.50e-09,97;CL:0002453,1.73e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.38e-13!73;UBERON:0005743!1.38e-13!73;UBERON:0000073!6.50e-13!75;UBERON:0001016!6.50e-13!75;UBERON:0004121!6.91e-10!102;UBERON:0000924!6.91e-10!102;UBERON:0006601!6.91e-10!102;UBERON:0002346!1.53e-09!71;UBERON:0003075!1.53e-09!71;UBERON:0007284!1.53e-09!71;UBERON:0001049!2.66e-09!52;UBERON:0005068!2.66e-09!52;UBERON:0006241!2.66e-09!52;UBERON:0007135!2.66e-09!52;UBERON:0000955!4.00e-09!50;UBERON:0006238!4.00e-09!50;UBERON:0002616!6.06e-09!49;UBERON:0000033!2.43e-08!63;UBERON:0003080!8.76e-08!40;UBERON:0003056!9.98e-08!49;UBERON:0002780!1.23e-07!39;UBERON:0001890!1.23e-07!39;UBERON:0006240!1.23e-07!39;UBERON:0002020!1.64e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.41e-14,73;UBERON:0001016,1.72e-13,75;UBERON:0000073,1.86e-11,54;UBERON:0004121,1.23e-09,95;UBERON:0000924,1.23e-09,95;UBERON:0006601,1.23e-09,95;UBERON:0001049,5.16e-09,52;UBERON:0005068,5.16e-09,52;UBERON:0006241,5.16e-09,52;UBERON:0007135,5.16e-09,52;UBERON:0002020,3.29e-08,34;UBERON:0002346,9.83e-07,64;UBERON:0003075,9.83e-07,64;UBERON:0007284,9.83e-07,64 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0,1.52617609466313,0.878744730937887,2.13872888981712,1.1198913730029,0,0,0,0,0.771778308107841,1.14613375975503,1.03134418455488,1.41621522601718,2.64495489636016,0.633831403506179,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,2.1314403448383,1.49800055259202,1.53687322128622,1.14058573539325,4.72520784160917,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,1.72521847832825,0,2.20231761998777,0.766124028511126,1.38245879930619,0.395658863190582,2.37867873366265,2.08365348222704,2.79182999001381,0.56276261003168,1.37518422999129,0.589257170947335,2.13557521198654,0.745597783301202,0.075726193333184,0,0,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,0.681721290312231,1.55871602761721,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0,0,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.521472960576829,0,0.62336413367868,0.324482526135515,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0,0.30140963567143,0,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0,0,0,0,0.37898282354097,0,1.01847051465113,0.938760993154008,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0,0.18006109403131,0.905510786479282,0.857348140126369,1.06404140185364,1.07021290561242,0.329098041204242,1.522324745573,0.23467170806371,1.69465656691056,0.220528398054962,0,0,0,0,0.328281799490123,0.291480836629851,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0.674321731924103,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0.675824501963113,0.58678619322877,0.5208175393758,0.104859344425711,0.483168241652012,0.864090018773596,0,0.810900861160657,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,0.31136204275253,0,0,0,0,0,0,0,0,0,0.50695859978048,0.754505365544305,0,0.192075457214608,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.73171189149109,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,1.63692417267876,0.309873682371932,0.578719832943424,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0,1.52617609466313,0.878744730937887,2.13872888981712,1.1198913730029,0,0,0,0,0.771778308107841,1.14613375975503,1.03134418455488,1.41621522601718,2.64495489636016,0.633831403506179,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,2.1314403448383,1.49800055259202,1.53687322128622,1.14058573539325,4.72520784160917,0.210324961351382,1.14260393761521,1.98781686856452,0.367472397644862,1.72521847832825,0,2.20231761998777,0.766124028511126,1.38245879930619,0.395658863190582,2.37867873366265,2.08365348222704,2.79182999001381,0.56276261003168,1.37518422999129,0.589257170947335,2.13557521198654,0.745597783301202,0.075726193333184,0,0,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,0.681721290312231,1.55871602761721,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0,0,0.608930956624282,0.230615497256059,0.904335843315735,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.521472960576829,0,0.62336413367868,0.324482526135515,0.509196819251581,0.248813941220186,0.252722758433675,0.210441855886474,0.260240885925407,0.919608417733892,0,0.30140963567143,0,0.384341160854549,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.342745537829186,0,0.814605311381257,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,2.87536413054709,0,0.312037673114561,0,0,0,0,0.37898282354097,0,1.01847051465113,0.938760993154008,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0.275936746304732,0.321101179975584,0.117211686592203,0.163934945376675,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0,0.18006109403131,0.905510786479282,0.857348140126369,1.06404140185364,1.07021290561242,0.329098041204242,1.522324745573,0.23467170806371,1.69465656691056,0.220528398054962,0,0,0,0,0.328281799490123,0.291480836629851,0,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.209088296014469,0,0.674321731924103,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0.675824501963113,0.58678619322877,0.5208175393758,0.104859344425711,0.483168241652012,0.864090018773596,0,0.810900861160657,0.205421914329655,0.25984164595559,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0.755393897389701,0,0,0,0,0.31136204275253,0,0,0,0,0,0,0,0,0,0.50695859978048,0.754505365544305,0,0.192075457214608,0.114870937911227,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.73171189149109,0.263069711437843,0.271608227691724,0,0.237270036248348,0.394017929502254,1.63692417267876,0.309873682371932,0.578719832943424,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p10@Maged1 | |||
}} | }} |
Latest revision as of 00:48, 2 October 2015
Short description: | p10@Maged1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Maged1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 206bp_to_ENSMUST00000138146_5end |
EntrezGene: | Maged1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.42e-22 | 23 |
neuroblast (sensu Vertebrata) | 8.42e-22 | 23 |
neural cell | 5.83e-20 | 43 |
ectodermal cell | 2.08e-19 | 44 |
neurectodermal cell | 2.08e-19 | 44 |
electrically responsive cell | 3.14e-15 | 39 |
electrically active cell | 3.14e-15 | 39 |
embryonic cell | 9.45e-15 | 70 |
neuron | 2.99e-14 | 33 |
neuronal stem cell | 2.99e-14 | 33 |
neuroblast | 2.99e-14 | 33 |
electrically signaling cell | 2.99e-14 | 33 |
somatic stem cell | 2.93e-10 | 91 |
multi fate stem cell | 2.93e-10 | 91 |
stem cell | 2.50e-09 | 97 |
oligodendrocyte precursor cell | 1.73e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.41e-14 | 73 |
nervous system | 1.72e-13 | 75 |
regional part of nervous system | 1.86e-11 | 54 |
ectoderm-derived structure | 1.23e-09 | 95 |
ectoderm | 1.23e-09 | 95 |
presumptive ectoderm | 1.23e-09 | 95 |
neural tube | 5.16e-09 | 52 |
neural rod | 5.16e-09 | 52 |
future spinal cord | 5.16e-09 | 52 |
neural keel | 5.16e-09 | 52 |
gray matter | 3.29e-08 | 34 |
neurectoderm | 9.83e-07 | 64 |
neural plate | 9.83e-07 | 64 |
presumptive neural plate | 9.83e-07 | 64 |