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FFCP PHASE1:Mm9::chrX:7305660..7305671,+: Difference between revisions

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(Created page with "{{FFCP |id=chrX:7305660..7305671,+ |short_description=p2@Praf2 |description=CAGE_peak_2_at_Praf2_5end |association_with_transcript=-25bp_to_NM_138602,uc009sme.1_5end |Ent...")
 
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{{FFCP
{{FFCP
|id=chrX:7305660..7305671,+
|DHSsupport=NA
|short_description=p2@Praf2
|DPIdataset=NA
|description=CAGE_peak_2_at_Praf2_5end
|association_with_transcript=-25bp_to_NM_138602,uc009sme.1_5end
|EntrezGene=54637
|EntrezGene=54637
|HGNC=
|HGNC=
|MCL_coexpression_id=2383
|TSSclassifier=NA
|UniProt=A2AEV6,Q9JIG8
|UniProt=A2AEV6,Q9JIG8
|association_with_transcript=-25bp_to_NM_138602,uc009sme.1_5end
|cluster_id=chrX:7305660..7305671,+
|description=CAGE_peak_2_at_Praf2_5end
|id=chrX:7305660..7305671,+
|ontology_enrichment_celltype=CL:0000055!6.28e-17!50;CL:0002319!7.94e-17!43;CL:0000221!1.97e-16!44;CL:0000133!1.97e-16!44;CL:0000393!6.93e-13!39;CL:0000211!6.93e-13!39;CL:0000117!6.05e-12!23;CL:0000337!6.05e-12!23;CL:0000540!1.10e-11!33;CL:0000047!1.10e-11!33;CL:0000031!1.10e-11!33;CL:0000404!1.10e-11!33;CL:0002321!1.19e-08!70;CL:0000220!1.19e-08!70
|ontology_enrichment_celltype_v019_2=CL:0002319,4.54e-17,43;CL:0000221,1.15e-16,44;CL:0000133,1.15e-16,44;CL:0000393,5.13e-13,39;CL:0000211,5.13e-13,39;CL:0000117,2.54e-12,23;CL:0000337,2.54e-12,23;CL:0000540,9.13e-12,33;CL:0000047,9.13e-12,33;CL:0000031,9.13e-12,33;CL:0000404,9.13e-12,33;CL:0002321,1.45e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.63e-32!75;UBERON:0001016!2.63e-32!75;UBERON:0001017!2.96e-31!73;UBERON:0005743!2.96e-31!73;UBERON:0001049!3.20e-24!52;UBERON:0005068!3.20e-24!52;UBERON:0006241!3.20e-24!52;UBERON:0007135!3.20e-24!52;UBERON:0000955!1.63e-23!50;UBERON:0006238!1.63e-23!50;UBERON:0004121!3.82e-23!102;UBERON:0000924!3.82e-23!102;UBERON:0006601!3.82e-23!102;UBERON:0002616!6.53e-23!49;UBERON:0002346!3.59e-21!71;UBERON:0003075!3.59e-21!71;UBERON:0007284!3.59e-21!71;UBERON:0000033!3.13e-20!63;UBERON:0002020!7.15e-19!34;UBERON:0003080!1.66e-17!40;UBERON:0002780!6.93e-17!39;UBERON:0001890!6.93e-17!39;UBERON:0006240!6.93e-17!39;UBERON:0003056!8.76e-17!49;UBERON:0002791!2.99e-16!29;UBERON:0003528!2.99e-16!29;UBERON:0001893!2.99e-16!29;UBERON:0000956!5.17e-12!21;UBERON:0001869!5.17e-12!21;UBERON:0000203!5.17e-12!21;UBERON:0002619!1.21e-10!17;UBERON:0000153!1.05e-09!94;UBERON:0007811!1.26e-08!86;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0003076!2.44e-07!12;UBERON:0003057!2.44e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.46e-33,75;UBERON:0001017,5.44e-32,73;UBERON:0000073,1.20e-26,54;UBERON:0004121,3.27e-25,95;UBERON:0000924,3.27e-25,95;UBERON:0006601,3.27e-25,95;UBERON:0002346,3.72e-25,64;UBERON:0003075,3.72e-25,64;UBERON:0007284,3.72e-25,64;UBERON:0001049,4.77e-25,52;UBERON:0005068,4.77e-25,52;UBERON:0006241,4.77e-25,52;UBERON:0007135,4.77e-25,52;UBERON:0000955,4.61e-22,47;UBERON:0006238,4.61e-22,47;UBERON:0002616,1.89e-21,46;UBERON:0002020,1.67e-19,34;UBERON:0010371,5.48e-19,73;UBERON:0003080,4.35e-18,40;UBERON:0002780,1.92e-17,39;UBERON:0001890,1.92e-17,39;UBERON:0006240,1.92e-17,39;UBERON:0003056,2.45e-17,49;UBERON:0003528,8.73e-17,29;UBERON:0002791,8.73e-17,29;UBERON:0001893,8.73e-17,29;UBERON:0010314,3.66e-15,92;UBERON:0000956,2.15e-12,21;UBERON:0001869,2.15e-12,21;UBERON:0000203,2.15e-12,21;UBERON:0002619,5.66e-11,17;UBERON:0002021,6.51e-08,10;UBERON:0000411,6.51e-08,10;UBERON:0001950,6.51e-08,10;UBERON:0003076,1.50e-07,12;UBERON:0003057,1.50e-07,12
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|phase1_expression=0.960893082628764,1.04692622291808,1.81999695755814,0.30246421130683,0.500895729946347,1.17515490338323,0.233612640595526,0.387369970324729,0.140788722151667,0,1.02730780935303,0.717949430958028,0.171200729931206,0.262261207256992,0.999329285446988,0.202475267389826,0,0.157731082679119,0.411343300817216,0,2.55129870453209,0.0992909512008853,0.261199789138935,1.43993180514066,2.52350209173887,1.14846392823004,0.86152399231815,0.646413698057667,1.14014051673824,0.756090389279792,1.77384408524244,1.27006134691926,1.84519436275371,0,1.1554064790051,0.831173226792462,0.408338712524738,0,0,0,0,0,0,3.27331726736501,4.05507724878058,4.40512205188036,15.6478268869608,9.15705656797875,9.22681967484782,9.13820525649132,7.8392396110203,5.75010257459886,0,0.725362142011344,0.336093799142464,10.2903774414379,5.15760191889762,1.03134418455488,8.29497489524351,8.99284664762456,5.70448263155561,9.4876468979357,9.78224275722253,4.04954872776629,5.93319817540185,2.8419204597844,9.88680364710736,13.0634223809329,5.18448061542388,4.59020190327748,4.41682418837902,15.1395021734016,7.95126747425809,5.26710436624302,5.65488279007595,6.43453150627015,19.82085857989,13.7902325132003,12.2885226604995,10.4190167306853,8.87430142943374,8.33461392890816,17.8677119360884,5.6276261003168,8.40390362772456,8.54422897873636,8.68467252874528,7.64237727883732,5.90664307998836,7.25486977025141,2.02905142091174,0,0,0,0,0,1.12355536105401,6.64678258054425,4.93593408745451,6.71345191569646,1.40843419776681,1.28326477414318,0,0,2.38140145112336,3.29367825117628,4.04419556011827,0.5709193985953,2.33044095282455,1.03909497345377,1.38788261412909,1.52232739156071,1.38369298353635,1.3565037649736,0.823120949949934,1.13099932196708,1.23597483867187,2.31358971071859,0.884610551949874,1.94120219936891,1.54589062922275,0.484875253135222,0,7.02673912827713,5.44561437714983,1.53274233125155,0.838705871541442,0,0.127070227073065,10.7849260371472,10.5225138648284,9.42407640846483,9.21268897019065,9.2057564638919,9.76603809429932,9.24775199486219,3.05518091550949,0.995255764880744,1.26361379216837,1.26265113531884,3.12289063110489,2.06911893990126,2.88099407688559,1.50704817835715,2.4493139694478,2.562274405697,1.49922759295566,2.32833033665114,3.88022387279116,1.70195472151037,2.81521798662318,3.94552318369635,2.50242524303038,3.48252166522167,1.4404749548556,1.19420560091096,0.702213187313235,0,0,1.44988040774851,2.34526059981096,1.98068267607116,1.18372367792605,1.57411385397923,1.3884040159864,0.465067889500816,1.87791380979733,0.116765342367169,2.13927804887525,1.14917224855367,0.486412857275134,0.584799949701329,0.439100230582101,0.671032093801859,12.1968170167194,6.48299057989492,0.991256348951394,1.32225283331772,2.77274725695804,2.32236671860439,1.9330119198314,1.81515172161008,1.77902435075896,1.71203063501303,0.949058123089023,0.823494773620054,0.502670417600539,0.795825888164603,1.16978452271472,0.898819408654221,1.29682829924817,1.59313018603494,3.22435431620239,1.37098215131675,1.1270773567308,2.03651327845314,1.55161989734101,1.40271639780637,1.26473074248515,1.18088118383682,0.941992367048249,0.740382983530803,0,0.500535317148282,0.393117990226406,0.449724224769707,0.405720242777006,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0.739012760666419,2.65287976478679,2.60743962307241,2.03694102930226,1.40814148973101,0.837531287209079,0.714130922658041,0.975668239288994,1.26108115284953,1.32878813789265,0.956728611944923,0.81931657357869,1.03610989119537,0.723245292907558,1.50791283939272,2.71952841909355,0.491764273019036,0.551873492609465,10.1146871692309,8.90808818100744,4.75411341592359,0.504941854408746,5.04813151066011,2.73307121007647,3.44677436372478,1.43381278771531,1.78238939265915,2.26461224631066,2.83367491172426,3.50707029493574,2.76701444562566,9.3183181762324,2.2710413633323,3.38324646967785,2.28041743095006,1.97964147567043,0,2.18502572539483,0.906970670894253,2.07465587731488,4.42952839321159,2.45948118355142,1.55056975900933,1.09060118843252,1.42598951353889,0.632073515871632,2.10837217149998,2.06271086496374,1.36175842301515,2.88097750450096,2.97524972700335,2.35770738534752,2.83744373827638,2.31879462882692,2.13913726782757,2.13125464380219,2.3467170806371,1.69465656691056,1.10264199027481,0.32977250588296,0.968786560175433,1.32688434841943,0.835606408021955,1.80554989719567,1.1659233465194,10.9400928186201,0.512612642393558,1.44470807574256,1.66675074632741,0.376736914009382,0.410082683163076,0.228778173206523,0,0.559805809294632,0,0,2.21435195506795,2.84647253977588,2.37611749807963,0.836353184057875,0.655087691238533,1.75323650300267,1.07449492442937,1.57053565190418,0.90730481304255,0.621339313086926,0,2.24274819065968,1.65458490457098,1.75006069509643,2.45403664607689,1.18269287843545,2.8165737274981,2.3436789271911,0.943734099831398,0.483168241652012,0,0.632022241256357,2.63542779877213,1.43795340030758,1.42912905275575,0.358053391334963,0.993406773906324,0.600977247599844,0.590758108698309,0.201932899896295,0.609654453239999,0.907435666231565,0.682205165178267,0.577271049841977,0.584384510907845,0.906921534460845,7.32553646134413,5.65197296639697,7.21903850365537,0.579568782096571,2.81523713176773,1.64836461840539,1.50057865355346,0,14.6835479080437,17.0320337507655,14.3223878359849,17.1853182343688,12.3314853558716,9.06472676867641,11.4753825039407,10.8077088773813,12.2348450425735,11.39072685854,1.45302286617847,1.59609949360412,2.90247129782028,3.40349403895612,1.67690530102386,2.5738091183002,2.22246727801615,1.44224540067226,2.24643446714271,2.52697211763797,1.2673964994512,2.82939512079114,2.80924522409647,2.62503124859964,2.29741875822453,2.85776214769844,3.70829843023538,1.54327376370964,1.23625770240992,2.35518272215036,3.08582327146874,1.24233064311536,1.43061713968393,1.88950341622027,2.07040636913727,2.5384382367503,1.28049581010941,2.89376682581627,1.90125759384206,1.68342681497322,3.32178050747688,2.75812550651578,0.818462086339379,3.09873682371932,2.12197272079256,5.49583271463481,3.27504251823572,2.14871054048298,1.14772999241306,2.64709702943419,2.78241402744506
|short_description=p2@Praf2
}}
}}

Latest revision as of 00:31, 2 October 2015

Short description:p2@Praf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Praf2_5end
Coexpression cluster:MCL_coexpression_mm9:2383
Association with transcript: -25bp_to_NM_138602, uc009sme.1_5end
EntrezGene:Praf2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Praf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.06
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.95
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F97.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B29.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G16.48
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.54e-1743
ectodermal cell1.15e-1644
neurectodermal cell1.15e-1644
electrically responsive cell5.13e-1339
electrically active cell5.13e-1339
CNS neuron (sensu Vertebrata)2.54e-1223
neuroblast (sensu Vertebrata)2.54e-1223
neuron9.13e-1233
neuronal stem cell9.13e-1233
neuroblast9.13e-1233
electrically signaling cell9.13e-1233
embryonic cell1.45e-0970

Uber anatomy
Ontology termp-valuen
nervous system4.46e-3375
central nervous system5.44e-3273
regional part of nervous system1.20e-2654
ectoderm-derived structure3.27e-2595
ectoderm3.27e-2595
presumptive ectoderm3.27e-2595
neurectoderm3.72e-2564
neural plate3.72e-2564
presumptive neural plate3.72e-2564
neural tube4.77e-2552
neural rod4.77e-2552
future spinal cord4.77e-2552
neural keel4.77e-2552
brain4.61e-2247
future brain4.61e-2247
regional part of brain1.89e-2146
gray matter1.67e-1934
ecto-epithelium5.48e-1973
anterior neural tube4.35e-1840
regional part of forebrain1.92e-1739
forebrain1.92e-1739
future forebrain1.92e-1739
pre-chordal neural plate2.45e-1749
brain grey matter8.73e-1729
regional part of telencephalon8.73e-1729
telencephalon8.73e-1729
structure with developmental contribution from neural crest3.66e-1592
cerebral cortex2.15e-1221
cerebral hemisphere2.15e-1221
pallium2.15e-1221
regional part of cerebral cortex5.66e-1117
occipital lobe6.51e-0810
visual cortex6.51e-0810
neocortex6.51e-0810
posterior neural tube1.50e-0712
chordal neural plate1.50e-0712
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