FFCP PHASE1:Mm9::chrX:35807985..35807987,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:35807985..35807987,-
|short_description=p@chrX:35807985..35807987,-
|description=CAGE_peak_at_chrX:35807985..35807987,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:35807985..35807987,- | |||
|description=CAGE_peak_at_chrX:35807985..35807987,- | |||
|id=chrX:35807985..35807987,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.75e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.73e-11,3;DOID:4045,3.73e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,1.73e-11,10;UBERON:0001134,2.75e-09,9;UBERON:0002036,2.75e-09,9;UBERON:0002385,2.75e-09,9;UBERON:0000486,2.75e-09,9;UBERON:0007503,2.75e-09,9;UBERON:0001015,2.75e-09,9;UBERON:0002329,2.75e-09,9;UBERON:0003082,2.75e-09,9;UBERON:0003059,2.75e-09,9;UBERON:0007282,2.75e-09,9;UBERON:0004290,2.75e-09,9;UBERON:0009618,2.75e-09,9;UBERON:0005256,8.91e-09,45;UBERON:0007524,1.51e-07,11;UBERON:0003077,1.51e-07,11;UBERON:0007285,1.51e-07,11;UBERON:0002100,1.54e-07,90;UBERON:0003104,5.10e-07,61;UBERON:0009142,5.10e-07,61;UBERON:0002107,6.54e-07,22;UBERON:0007499,6.54e-07,22;UBERON:0006925,6.54e-07,22;UBERON:0009497,6.54e-07,22;UBERON:0000015,6.54e-07,22;UBERON:0002423,6.54e-07,22;UBERON:0006235,6.54e-07,22;UBERON:0008835,6.54e-07,22;UBERON:0003894,6.54e-07,22;UBERON:0004161,6.54e-07,22;UBERON:0008836,6.54e-07,22 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,0,0,0,0,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,2.09265815368454,3.906676722619,1.0470474879476,8.2352408324342,6.83045484958446,0.971020706062307,0.629484089877886,0.304130793658544,1.28482726513177,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,1.44932244350839,0,0.679971333707751,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,0,1.02765491747154,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.766371165625774,0.838705871541442,0,1.14363204365758,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.896796041993948,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.25667604400135,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.941992367048249,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.972811360650212,1.64736847912849,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,1.4351793081753,1.92977408545347,0,0.37898282354097,0,1.35796068620151,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.596861720015682,0.820704498725306,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.339956859987711,0.69975726161829,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,1.04544148007234,0,0.539457385539283,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0.747582730219894,0.496375471371293,0,0.645799117388655,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0.483168241652012,0.864090018773596,0,0.202725215290164,0.513554785824136,1.03936658382236,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.467507608726276,1.13365191807606,0.221985953374065,0,0,0,0,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | |phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0.422366166455,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.340173160604279,0.198581902401771,0,0,0,0,0,0.430942465371778,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,2.09265815368454,3.906676722619,1.0470474879476,8.2352408324342,6.83045484958446,0.971020706062307,0.629484089877886,0.304130793658544,1.28482726513177,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.30559649555362,0,0.569486723196412,0.186399445825301,0.075726193333184,0.226714680320357,1.44932244350839,0,0.679971333707751,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.649473123033642,0.760079596425296,0,1.02765491747154,0,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0.161766849947409,0,0,0,0,0.209446706813455,0.766371165625774,0.838705871541442,0,1.14363204365758,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.81471491080253,0.124406970610093,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.896796041993948,0.374806898238915,0.258703370739016,0,0.189106080167819,0,0,0.278047249225598,0,0.411564272815887,0.59710280045548,0.702213187313235,0.257347907114715,0.852490498186778,0,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.617068451549513,0.465067889500816,0.536546802799238,0.467061369468678,0.493679549740441,0.164167464079095,0.243206428637567,0.730999937126662,0,0.402619256281115,0,0.205809224758569,0,0.528901133327089,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.988193728344065,1.25667604400135,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0,0.456994050438915,1.1270773567308,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.941992367048249,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.50925170356284,0,0.972811360650212,1.64736847912849,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,1.4351793081753,1.92977408545347,0,0.37898282354097,0,1.35796068620151,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0,0.8858587585951,0.318909537314974,0.327726629431476,1.03610989119537,0.433947175744535,0,0.54390568381871,0,0,0.160550589987792,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0.215423397732799,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0.35613120733451,0.81443479676788,0.494910368917606,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.356737635204141,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0,0.32977250588296,0.322928853391811,0.301564624640779,0.596861720015682,0.820704498725306,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.410082683163076,0.228778173206523,0.339956859987711,0.69975726161829,0.552799895217695,0,0.158167996790568,0.406638934253697,0.216010681643603,1.04544148007234,0,0.539457385539283,0,0.523511883968059,0.259229946583586,0.621339313086926,0,0.747582730219894,0.496375471371293,0,0.645799117388655,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0.483168241652012,0.864090018773596,0,0.202725215290164,0.513554785824136,1.03936658382236,0,0.198681354781265,0.240390899039938,0,0.302899349844443,0.457240839929999,0.302478555410522,0.292373642219257,0.0962118416403295,0.467507608726276,1.13365191807606,0.221985953374065,0,0,0,0,0,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0.252697211763798,0,0,0.280924522409647,0.320125762024346,0.17230640686684,0,0.115884325944855,0.77163688185482,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0.182927972872773,0.526139422875686,0.543216455383447,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.385813221962283,0,0.233931608445408,0,0.382576664137687,0.441182838239031,0.231867835620421 | ||
|short_description=p@chrX:35807985..35807987,- | |||
}} | }} |
Latest revision as of 06:35, 6 August 2015
Short description: | p@chrX:35807985..35807987, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:35807985..35807987, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.75e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 1.73e-11 | 10 |
skeletal muscle tissue | 2.75e-09 | 9 |
striated muscle tissue | 2.75e-09 | 9 |
muscle tissue | 2.75e-09 | 9 |
multilaminar epithelium | 2.75e-09 | 9 |
epithelial vesicle | 2.75e-09 | 9 |
musculature | 2.75e-09 | 9 |
somite | 2.75e-09 | 9 |
myotome | 2.75e-09 | 9 |
presomitic mesoderm | 2.75e-09 | 9 |
presumptive segmental plate | 2.75e-09 | 9 |
dermomyotome | 2.75e-09 | 9 |
trunk paraxial mesoderm | 2.75e-09 | 9 |
trunk mesenchyme | 8.91e-09 | 45 |
dense mesenchyme tissue | 1.51e-07 | 11 |
paraxial mesoderm | 1.51e-07 | 11 |
presumptive paraxial mesoderm | 1.51e-07 | 11 |
trunk | 1.54e-07 | 90 |
mesenchyme | 5.10e-07 | 61 |
entire embryonic mesenchyme | 5.10e-07 | 61 |
liver | 6.54e-07 | 22 |
epithelial sac | 6.54e-07 | 22 |
digestive gland | 6.54e-07 | 22 |
epithelium of foregut-midgut junction | 6.54e-07 | 22 |
anatomical boundary | 6.54e-07 | 22 |
hepatobiliary system | 6.54e-07 | 22 |
foregut-midgut junction | 6.54e-07 | 22 |
hepatic diverticulum | 6.54e-07 | 22 |
liver primordium | 6.54e-07 | 22 |
septum transversum | 6.54e-07 | 22 |
liver bud | 6.54e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.73e-11 | 3 |
muscle cancer | 3.73e-11 | 3 |