FFCP PHASE1:Mm9::chrX:130432831..130432916,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:130432831..130432916,-
|short_description=p1@Tspan6
|description=CAGE_peak_1_at_Tspan6_5end
|association_with_transcript=51bp_to_ENSMUST00000087557,NM_0196...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56496 | |EntrezGene=56496 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1164 | |||
|TSSclassifier=NA | |||
|UniProt=Q99L96 | |UniProt=Q99L96 | ||
|association_with_transcript=51bp_to_ENSMUST00000087557,NM_019656,uc009ufa.1_5end | |||
|cluster_id=chrX:130432831..130432916,- | |||
|description=CAGE_peak_1_at_Tspan6_5end | |||
|id=chrX:130432831..130432916,- | |||
|ontology_enrichment_celltype=CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39;CL:0000540!1.68e-11!33;CL:0000047!1.68e-11!33;CL:0000031!1.68e-11!33;CL:0000404!1.68e-11!33;CL:0000221!6.09e-09!44;CL:0000133!6.09e-09!44;CL:0002319!1.82e-08!43;CL:0000055!2.53e-08!50;CL:0000117!4.03e-08!23;CL:0000337!4.03e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.58e-11,39;CL:0000211,1.58e-11,39;CL:0000540,1.66e-11,33;CL:0000047,1.66e-11,33;CL:0000031,1.66e-11,33;CL:0000404,1.66e-11,33;CL:0000221,6.03e-09,44;CL:0000133,6.03e-09,44;CL:0002319,1.80e-08,43;CL:0000117,3.99e-08,23;CL:0000337,3.99e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.47e-09!102;UBERON:0000924!1.47e-09!102;UBERON:0006601!1.47e-09!102;UBERON:0002346!2.98e-09!71;UBERON:0003075!2.98e-09!71;UBERON:0007284!2.98e-09!71;UBERON:0001017!7.78e-09!73;UBERON:0005743!7.78e-09!73;UBERON:0000073!2.41e-08!75;UBERON:0001016!2.41e-08!75;UBERON:0000468!1.22e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.30e-12,92;UBERON:0001017,7.70e-09,73;UBERON:0004121,1.41e-08,95;UBERON:0000924,1.41e-08,95;UBERON:0006601,1.41e-08,95;UBERON:0001016,2.39e-08,75;UBERON:0002346,2.45e-08,64;UBERON:0003075,2.45e-08,64;UBERON:0007284,2.45e-08,64;UBERON:0010371,4.46e-08,73 | |||
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| ||
|short_description=p1@Tspan6 | |||
}} | }} |
Latest revision as of 14:00, 1 October 2015
Short description: | p1@Tspan6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1164 |
Association with transcript: | 51bp_to_ENSMUST00000087557, NM_019656, uc009ufa.1_5end |
EntrezGene: | Tspan6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.58e-11 | 39 |
electrically active cell | 1.58e-11 | 39 |
neuron | 1.66e-11 | 33 |
neuronal stem cell | 1.66e-11 | 33 |
neuroblast | 1.66e-11 | 33 |
electrically signaling cell | 1.66e-11 | 33 |
ectodermal cell | 6.03e-09 | 44 |
neurectodermal cell | 6.03e-09 | 44 |
neural cell | 1.80e-08 | 43 |
CNS neuron (sensu Vertebrata) | 3.99e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.99e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.30e-12 | 92 |
central nervous system | 7.70e-09 | 73 |
ectoderm-derived structure | 1.41e-08 | 95 |
ectoderm | 1.41e-08 | 95 |
presumptive ectoderm | 1.41e-08 | 95 |
nervous system | 2.39e-08 | 75 |
neurectoderm | 2.45e-08 | 64 |
neural plate | 2.45e-08 | 64 |
presumptive neural plate | 2.45e-08 | 64 |
ecto-epithelium | 4.46e-08 | 73 |