Personal tools

FFCP PHASE1:Mm9::chrX:103123886..103123922,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:103123886..103123922,- |short_description=p3@Atrx |description=CAGE_peak_3_at_Atrx_5end |association_with_transcript=0bp_to_ENSMUST00000101305,uc009ubg.1_5...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:103123886..103123922,-
|DHSsupport=NA
|short_description=p3@Atrx
|DPIdataset=NA
|description=CAGE_peak_3_at_Atrx_5end
|association_with_transcript=0bp_to_ENSMUST00000101305,uc009ubg.1_5end
|EntrezGene=22589
|EntrezGene=22589
|HGNC=
|HGNC=
|MCL_coexpression_id=143
|TSSclassifier=NA
|UniProt=Q3TA30
|UniProt=Q3TA30
|association_with_transcript=0bp_to_ENSMUST00000101305,uc009ubg.1_5end
|cluster_id=chrX:103123886..103123922,-
|description=CAGE_peak_3_at_Atrx_5end
|id=chrX:103123886..103123922,-
|ontology_enrichment_celltype=CL:0000838!3.09e-07!12;CL:0000542!3.97e-07!13;CL:0000051!3.97e-07!13;CL:0000084!5.70e-07!11;CL:0000827!5.70e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,2.34e-07,12;CL:0000542,3.02e-07,13;CL:0000051,3.02e-07,13;CL:0000084,4.37e-07,11;CL:0000827,4.37e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.80074423552397,6.2815573375085,5.91499011206397,0.90739263392049,1.00179145989269,4.36486106970913,5.13947809310157,4.51931632045517,7.32101355188667,4.44722600011788,3.25314139628459,4.22792442675283,6.50562773738582,6.38168937658681,0.999329285446988,2.22722794128809,0.699561878128147,3.3123527362615,4.79900517620086,2.12194825899015,1.78590909317247,4.17021995043718,8.097193463307,3.83981814704176,3.21172993494038,8.03924749761028,6.03066794622705,8.61884930743556,0.190023419456374,2.52030129759931,6.65191531965914,1.27006134691926,0.61506478758457,0,0.288851619751275,0.498703936075477,1.02084678131185,12.1374172913703,5.4693474116666,12.0410461113974,9.41170380849623,10.2456822743767,7.76816564849846,1.38486499773135,1.82478476195126,1.83546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,2.85230430298152,4.35217285206807,3.6970317905671,1.28629718017973,1.14613375975503,1.03134418455488,0.202316460859598,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0.414758449233911,0.135005938331691,0.420649922702764,0.285650984403804,0.441737081903227,0.61245399607477,0.383381884072945,0,1.10115880999389,1.53224805702225,0.153606533256243,0.131886287730194,0.457438218012048,0,0,1.68828783009504,0.916789486660861,1.17851434189467,0.854230084794618,0.745597783301202,2.12033341332915,2.87171928405785,4.34796733052517,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,0.421333260395256,0.681721290312231,0.779358013808606,0.70667914902068,1.54927761754349,1.28326477414318,0,0,0.865964164044856,0.253359865475099,1.01104889002957,1.82694207550496,23.0454716445983,2.52351636410202,1.56136794089522,1.82679286987285,2.07553947530453,1.95939432718409,3.29248379979973,0.628332956648377,1.97755974187499,2.02439099687876,2.65383165584962,1.7794353494215,1.76673214768315,1.45462575940567,0,2.34224637609238,1.8850203613211,0.510914110417183,1.67741174308288,0.599902730993408,1.27070227073065,2.69623150928681,2.74500361691176,1.00523481690292,1.73824320192276,1.53429274398198,4.36354893575076,1.94689515681309,1.42575109390443,2.98576729464223,4.0435641349388,0.841767423545896,0.910843100738926,0.689706313300419,1.26043490863744,0.753524089178575,1.97305847538851,2.69038812598185,1.59292931751539,3.10444044886819,0,1.13463648100692,0.703804496655795,1.53437012699302,1.39023624612799,0.696504333044333,1.64625709126355,0.796137067273973,2.1066395619397,0.51469581422943,0.852490498186778,1.86413195281952,1.40715635988658,1.2604344302271,2.13070262026689,0.983821158737019,0.462801338662135,1.62773761325285,0.536546802799238,1.98501082024188,0.493679549740441,0.985004784474571,2.02672023864639,1.90059983652932,2.63460138349261,1.20785776884335,2.10289948564127,2.36680608472354,1.32167513193519,1.85115396664481,1.91959425481711,1.16118335930219,0.77320476793256,1.81515172161008,1.11189021922435,1.90225626112559,1.89811624617805,1.15289268306808,2.26201687920243,1.1937388322469,1.36474860983384,2.69645822596266,1.08069024937347,1.39398891278057,0,1.71372768914593,0,1.22190796707189,1.55161989734101,1.96380295692892,1.3279672796094,1.62371162777562,2.19798218977925,2.09775178667061,2.07516838961004,0.667380422864376,1.76903095601883,1.57403478669398,1.21716072833102,1.20588579876208,1.52775511068852,1.15078454980324,2.2698931748505,0.274561413188081,2.87536413054709,3.34926852901653,0.936113019343682,1.51547326768267,1.07638448113147,1.4473305640901,4.80358294433172,1.13694847062291,1.14075483509418,1.52770577197669,1.40814148973101,1.67506257441816,2.14239276797412,3.51240566144038,4.57141917907954,3.5434350343804,3.98636921643718,3.27726629431476,3.45369963731791,3.7608755231193,9.04747703635634,9.24639662491806,1.96705709207614,1.37968373152366,2.40825884981688,2.69586879162067,0,2.27223834483936,1.57754109708128,1.56175497718655,1.07711698866399,1.19484398976276,0.891194696329576,0.566153061577665,0.809621403349789,0.584511715822624,1.18586333383957,2.57057053137446,1.98716119291576,0.890328018336276,2.93196526836437,3.95928295134085,1.32745138339963,0.242780636154981,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.03371317267288,3.27180356529755,2.13898427030833,1.58018378967908,1.05418608574999,0,1.02131881726136,0.720244376125241,0,1.50035924522115,2.30542303734956,0.713475270408282,1.97458824722545,1.2178597964584,4.22409074514679,4.66030555900404,0.661585194164886,0.8244312647074,3.06782410722221,2.0506394475573,1.07435109602823,0.820704498725306,2.33184669303881,2.41052892613663,2.22132145037209,1.44470807574256,2.03713980106683,1.69531611304222,3.8274383761887,1.83022538565218,2.03974115992626,1.6794174278839,1.38199973804424,1.90934123603023,0.949007980743406,0.203319467126849,1.29606408986162,1.04544148007234,0.218362563746178,1.07891477107857,1.65306911450672,0.523511883968059,1.55537967950151,1.86401793926078,1.69107881605257,2.69129782879162,2.48187735685646,1.75006069509643,0.774958940866387,1.18269287843545,3.28600268208111,1.17183946359555,3.14578033277133,1.93267296660805,1.72818003754719,5.37218905067903,0,1.64337531463724,1.55904987573354,2.32734704367726,2.58285761215644,3.96644983415897,4.57837534241189,6.15895344683701,4.49620159264499,2.41982844328417,4.48306251402861,3.46362629905186,4.09069157635491,2.0405734525369,19.7567498502918,46.3820638670989,15.4453847054952,2.51146472241848,1.87682475451182,2.01466786693992,1.71494703263253,0,1.6942555278512,1.38097570952153,1.14579102687879,1.71853182343688,0.685082519770642,2.2661816921691,1.35004500046361,3.60256962579376,0.906284817968409,1.03552062350364,0.93408612825759,3.19219898720825,0.682934423016537,1.70174701947806,1.25767897576789,2.02227859295016,2.00022055021454,0.412070114477788,2.24643446714271,1.76888048234658,1.52087579934144,1.13175804831646,1.591905626988,1.72867911493147,1.55075766180156,1.90517476513229,1.27472758539341,1.54327376370964,0.824171801606613,1.32479028120958,1.37147700954166,2.30718548007139,2.14592570952589,2.76158191601424,1.78807822789128,1.01537529470012,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,1.77952527186261,1.77308068276014,0,0.929621047115796,2.50778594275484,0.499621155875892,1.16965804222704,2.57845264857958,2.29545998482612,1.32354851471709,2.31867835620421
|phase1_expression=0.80074423552397,6.2815573375085,5.91499011206397,0.90739263392049,1.00179145989269,4.36486106970913,5.13947809310157,4.51931632045517,7.32101355188667,4.44722600011788,3.25314139628459,4.22792442675283,6.50562773738582,6.38168937658681,0.999329285446988,2.22722794128809,0.699561878128147,3.3123527362615,4.79900517620086,2.12194825899015,1.78590909317247,4.17021995043718,8.097193463307,3.83981814704176,3.21172993494038,8.03924749761028,6.03066794622705,8.61884930743556,0.190023419456374,2.52030129759931,6.65191531965914,1.27006134691926,0.61506478758457,0,0.288851619751275,0.498703936075477,1.02084678131185,12.1374172913703,5.4693474116666,12.0410461113974,9.41170380849623,10.2456822743767,7.76816564849846,1.38486499773135,1.82478476195126,1.83546752161682,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,2.85230430298152,4.35217285206807,3.6970317905671,1.28629718017973,1.14613375975503,1.03134418455488,0.202316460859598,0,0,0,0,0.899899717281399,0,0,0,0.384218305321555,0.414758449233911,0.135005938331691,0.420649922702764,0.285650984403804,0.441737081903227,0.61245399607477,0.383381884072945,0,1.10115880999389,1.53224805702225,0.153606533256243,0.131886287730194,0.457438218012048,0,0,1.68828783009504,0.916789486660861,1.17851434189467,0.854230084794618,0.745597783301202,2.12033341332915,2.87171928405785,4.34796733052517,0.860423876981386,0,1.07940638327563,0.649776417447669,1.34408066129201,0.421333260395256,0.681721290312231,0.779358013808606,0.70667914902068,1.54927761754349,1.28326477414318,0,0,0.865964164044856,0.253359865475099,1.01104889002957,1.82694207550496,23.0454716445983,2.52351636410202,1.56136794089522,1.82679286987285,2.07553947530453,1.95939432718409,3.29248379979973,0.628332956648377,1.97755974187499,2.02439099687876,2.65383165584962,1.7794353494215,1.76673214768315,1.45462575940567,0,2.34224637609238,1.8850203613211,0.510914110417183,1.67741174308288,0.599902730993408,1.27070227073065,2.69623150928681,2.74500361691176,1.00523481690292,1.73824320192276,1.53429274398198,4.36354893575076,1.94689515681309,1.42575109390443,2.98576729464223,4.0435641349388,0.841767423545896,0.910843100738926,0.689706313300419,1.26043490863744,0.753524089178575,1.97305847538851,2.69038812598185,1.59292931751539,3.10444044886819,0,1.13463648100692,0.703804496655795,1.53437012699302,1.39023624612799,0.696504333044333,1.64625709126355,0.796137067273973,2.1066395619397,0.51469581422943,0.852490498186778,1.86413195281952,1.40715635988658,1.2604344302271,2.13070262026689,0.983821158737019,0.462801338662135,1.62773761325285,0.536546802799238,1.98501082024188,0.493679549740441,0.985004784474571,2.02672023864639,1.90059983652932,2.63460138349261,1.20785776884335,2.10289948564127,2.36680608472354,1.32167513193519,1.85115396664481,1.91959425481711,1.16118335930219,0.77320476793256,1.81515172161008,1.11189021922435,1.90225626112559,1.89811624617805,1.15289268306808,2.26201687920243,1.1937388322469,1.36474860983384,2.69645822596266,1.08069024937347,1.39398891278057,0,1.71372768914593,0,1.22190796707189,1.55161989734101,1.96380295692892,1.3279672796094,1.62371162777562,2.19798218977925,2.09775178667061,2.07516838961004,0.667380422864376,1.76903095601883,1.57403478669398,1.21716072833102,1.20588579876208,1.52775511068852,1.15078454980324,2.2698931748505,0.274561413188081,2.87536413054709,3.34926852901653,0.936113019343682,1.51547326768267,1.07638448113147,1.4473305640901,4.80358294433172,1.13694847062291,1.14075483509418,1.52770577197669,1.40814148973101,1.67506257441816,2.14239276797412,3.51240566144038,4.57141917907954,3.5434350343804,3.98636921643718,3.27726629431476,3.45369963731791,3.7608755231193,9.04747703635634,9.24639662491806,1.96705709207614,1.37968373152366,2.40825884981688,2.69586879162067,0,2.27223834483936,1.57754109708128,1.56175497718655,1.07711698866399,1.19484398976276,0.891194696329576,0.566153061577665,0.809621403349789,0.584511715822624,1.18586333383957,2.57057053137446,1.98716119291576,0.890328018336276,2.93196526836437,3.95928295134085,1.32745138339963,0.242780636154981,0.302323556964751,1.32023555829129,0.295301892880773,1.22974059177571,1.03371317267288,3.27180356529755,2.13898427030833,1.58018378967908,1.05418608574999,0,1.02131881726136,0.720244376125241,0,1.50035924522115,2.30542303734956,0.713475270408282,1.97458824722545,1.2178597964584,4.22409074514679,4.66030555900404,0.661585194164886,0.8244312647074,3.06782410722221,2.0506394475573,1.07435109602823,0.820704498725306,2.33184669303881,2.41052892613663,2.22132145037209,1.44470807574256,2.03713980106683,1.69531611304222,3.8274383761887,1.83022538565218,2.03974115992626,1.6794174278839,1.38199973804424,1.90934123603023,0.949007980743406,0.203319467126849,1.29606408986162,1.04544148007234,0.218362563746178,1.07891477107857,1.65306911450672,0.523511883968059,1.55537967950151,1.86401793926078,1.69107881605257,2.69129782879162,2.48187735685646,1.75006069509643,0.774958940866387,1.18269287843545,3.28600268208111,1.17183946359555,3.14578033277133,1.93267296660805,1.72818003754719,5.37218905067903,0,1.64337531463724,1.55904987573354,2.32734704367726,2.58285761215644,3.96644983415897,4.57837534241189,6.15895344683701,4.49620159264499,2.41982844328417,4.48306251402861,3.46362629905186,4.09069157635491,2.0405734525369,19.7567498502918,46.3820638670989,15.4453847054952,2.51146472241848,1.87682475451182,2.01466786693992,1.71494703263253,0,1.6942555278512,1.38097570952153,1.14579102687879,1.71853182343688,0.685082519770642,2.2661816921691,1.35004500046361,3.60256962579376,0.906284817968409,1.03552062350364,0.93408612825759,3.19219898720825,0.682934423016537,1.70174701947806,1.25767897576789,2.02227859295016,2.00022055021454,0.412070114477788,2.24643446714271,1.76888048234658,1.52087579934144,1.13175804831646,1.591905626988,1.72867911493147,1.55075766180156,1.90517476513229,1.27472758539341,1.54327376370964,0.824171801606613,1.32479028120958,1.37147700954166,2.30718548007139,2.14592570952589,2.76158191601424,1.78807822789128,1.01537529470012,1.46342378298218,1.57841826862706,1.7654534799962,1.12228454331548,1.77952527186261,1.77308068276014,0,0.929621047115796,2.50778594275484,0.499621155875892,1.16965804222704,2.57845264857958,2.29545998482612,1.32354851471709,2.31867835620421
|short_description=p3@Atrx
}}
}}

Latest revision as of 12:19, 1 October 2015

Short description:p3@Atrx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Atrx_5end
Coexpression cluster:MCL_coexpression_mm9:143
Association with transcript: 0bp_to_ENSMUST00000101305, uc009ubg.1_5end
EntrezGene:Atrx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Atrx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F92.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H923.05
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E42.42
thymus, neonate N20.CNhs11186.820-7A24.48
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F746.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.45
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.34e-0712
lymphocyte3.02e-0713
common lymphoid progenitor3.02e-0713
T cell4.37e-0711
pro-T cell4.37e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:103123886..103123922,-&oldid=4302971"