FFCP PHASE1:Mm9::chr9:99337106..99337152,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:99337106..99337152,-
|short_description=p1@Mras
|description=CAGE_peak_1_at_Mras_5end
|association_with_transcript=0bp_to_ENSMUST00000035045,NM_008624,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17532 | |EntrezGene=17532 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=620 | |||
|TSSclassifier=NA | |||
|UniProt=O08989,Q3TPX5 | |UniProt=O08989,Q3TPX5 | ||
|association_with_transcript=0bp_to_ENSMUST00000035045,NM_008624,uc009rec.1_5end | |||
|cluster_id=chr9:99337106..99337152,- | |||
|description=CAGE_peak_1_at_Mras_5end | |||
|id=chr9:99337106..99337152,- | |||
|ontology_enrichment_celltype=CL:0002319!2.14e-16!43;CL:0000221!3.34e-16!44;CL:0000133!3.34e-16!44;CL:0000055!4.72e-16!50;CL:0000117!2.23e-13!23;CL:0000337!2.23e-13!23;CL:0000393!3.48e-11!39;CL:0000211!3.48e-11!39;CL:0000540!5.72e-11!33;CL:0000047!5.72e-11!33;CL:0000031!5.72e-11!33;CL:0000404!5.72e-11!33;CL:0002321!5.34e-07!70;CL:0000220!5.34e-07!70;CL:0000333!9.80e-07!10;CL:0000095!9.80e-07!10;CL:0000243!9.80e-07!10;CL:0000123!9.80e-07!10;CL:0000125!9.80e-07!10;CL:0000030!9.80e-07!10;CL:0000339!9.80e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.49e-16,43;CL:0000221,3.88e-16,44;CL:0000133,3.88e-16,44;CL:0000117,1.64e-13,23;CL:0000337,1.64e-13,23;CL:0000393,4.27e-11,39;CL:0000211,4.27e-11,39;CL:0000540,7.26e-11,33;CL:0000047,7.26e-11,33;CL:0000031,7.26e-11,33;CL:0000404,7.26e-11,33;CL:0002321,4.71e-07,70;CL:0000333,8.56e-07,10;CL:0000095,8.56e-07,10;CL:0000243,8.56e-07,10;CL:0000123,8.56e-07,10;CL:0000125,8.56e-07,10;CL:0000030,8.56e-07,10;CL:0000339,8.56e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.53e-29!102;UBERON:0000924!1.53e-29!102;UBERON:0006601!1.53e-29!102;UBERON:0000073!1.57e-29!75;UBERON:0001016!1.57e-29!75;UBERON:0001017!2.35e-28!73;UBERON:0005743!2.35e-28!73;UBERON:0002346!6.71e-28!71;UBERON:0003075!6.71e-28!71;UBERON:0007284!6.71e-28!71;UBERON:0001049!8.92e-24!52;UBERON:0005068!8.92e-24!52;UBERON:0006241!8.92e-24!52;UBERON:0007135!8.92e-24!52;UBERON:0000955!4.19e-22!50;UBERON:0006238!4.19e-22!50;UBERON:0002616!1.51e-21!49;UBERON:0002020!1.09e-20!34;UBERON:0000033!1.86e-20!63;UBERON:0003056!2.54e-18!49;UBERON:0002791!1.69e-17!29;UBERON:0003528!1.69e-17!29;UBERON:0001893!1.69e-17!29;UBERON:0003080!2.30e-17!40;UBERON:0002780!5.25e-17!39;UBERON:0001890!5.25e-17!39;UBERON:0006240!5.25e-17!39;UBERON:0000956!2.98e-13!21;UBERON:0001869!2.98e-13!21;UBERON:0000203!2.98e-13!21;UBERON:0002619!6.15e-11!17;UBERON:0000153!2.26e-09!94;UBERON:0007811!8.21e-09!86;UBERON:0000025!1.58e-07!114;UBERON:0002021!3.42e-07!10;UBERON:0000411!3.42e-07!10;UBERON:0001950!3.42e-07!10;UBERON:0003076!4.79e-07!12;UBERON:0003057!4.79e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-29,75;UBERON:0001017,2.09e-28,73;UBERON:0004121,5.29e-26,95;UBERON:0000924,5.29e-26,95;UBERON:0006601,5.29e-26,95;UBERON:0002346,3.84e-25,64;UBERON:0003075,3.84e-25,64;UBERON:0007284,3.84e-25,64;UBERON:0000073,3.85e-25,54;UBERON:0001049,5.00e-24,52;UBERON:0005068,5.00e-24,52;UBERON:0006241,5.00e-24,52;UBERON:0007135,5.00e-24,52;UBERON:0002020,6.60e-21,34;UBERON:0010314,7.62e-21,92;UBERON:0000955,7.92e-21,47;UBERON:0006238,7.92e-21,47;UBERON:0010371,2.62e-20,73;UBERON:0002616,2.83e-20,46;UBERON:0003056,1.64e-18,49;UBERON:0003528,1.11e-17,29;UBERON:0002791,1.11e-17,29;UBERON:0001893,1.11e-17,29;UBERON:0003080,1.53e-17,40;UBERON:0002780,3.52e-17,39;UBERON:0001890,3.52e-17,39;UBERON:0006240,3.52e-17,39;UBERON:0000956,2.20e-13,21;UBERON:0001869,2.20e-13,21;UBERON:0000203,2.20e-13,21;UBERON:0002619,4.82e-11,17;UBERON:0002021,2.96e-07,10;UBERON:0000411,2.96e-07,10;UBERON:0001950,2.96e-07,10;UBERON:0000025,3.20e-07,114;UBERON:0003076,4.15e-07,12;UBERON:0003057,4.15e-07,12;UBERON:0000922,7.36e-07,320 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0.699561878128147,0,0.137114433605739,0,5.6128571499706,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0.577703239502549,0.664938581433969,1.02084678131185,0,0,0,0,0,0,3.77690453926732,3.14268486780495,7.34187008646726,21.1245662973971,19.6222640742402,22.4079906389161,18.8597002102055,13.9986421625363,15.8127820801469,0,0,0,3.08711323243136,3.72493471920384,10.8291139378263,20.0293296251002,15.869729378161,22.1840991227163,11.5207140903505,7.11435836888911,7.19919773825119,5.93319817540185,4.2628806896766,12.8828047522914,23.0530983192933,18.2493717662921,15.7956947848078,17.2466468308133,25.7085885963423,24.7372765865807,14.0864419097197,17.443875725319,11.9498442259303,9.91042928994498,16.4716666129892,13.8245879930619,20.7061471736404,22.1400097517831,13.5437476344758,13.1216009530649,15.1945904708554,15.5854212732346,15.6153150301044,19.6472919502762,16.9623495701024,19.5373578799615,9.97544593409569,4.34796733052517,1.72084775396277,2.03991400112325,1.07940638327563,1.29955283489534,0.896053774194671,2.80888840263504,3.74946709671727,4.41636207824877,5.3000936176551,3.23939865486365,3.84979432242953,7.64415719119937,0,0.865964164044856,1.52015919285059,2.02209778005913,1.37020655662872,0.517875767294343,14.398887489288,7.11289839741157,8.8294988710521,10.6083128737787,8.28974523039424,9.28950786372068,9.80199412371469,8.15743393523434,1.44599356919912,0,3.39710384889559,1.32504911076236,1.93950101254089,0,8.78342391034641,7.12118803165747,1.02182822083437,0.239630249011841,0.599902730993408,0.381210681219194,9.28701964309901,17.8425235099264,16.3350657746724,27.9857155509565,27.6172693916757,13.714010940931,15.0884374653015,4.07357455401265,2.61254638281195,2.27450482590307,2.52530227063769,2.86264974517948,3.90833577536904,6.48223667299257,5.27466862425003,8.300452896462,8.58361925908494,10.8694000489285,5.69147415625834,6.25147179505242,4.34943984385984,7.5658983390498,6.57587197282724,3.89266148915837,5.57203466435466,2.46938563689532,3.98068533636986,0,1.28673953557358,1.13665399758237,2.69263504296152,0.938104239924385,1.62055855314913,1.89395788468168,2.16440654922144,2.77680803197281,3.25547522650571,2.41446061259657,2.45207218971056,2.46839774870221,1.97000956894914,1.86458261955468,2.04679982395465,2.19550115291051,1.20785776884335,22.5010244963616,17.2879748797198,0.660837565967596,0.528901133327089,2.13288250535234,1.39342003116263,2.19074684247559,1.21010114774006,1.33426826306922,1.33157938278791,0.949058123089023,0.823494773620054,1.50801125280162,1.98956472041151,1.75467678407208,0,1.29682829924817,0.796565093017469,1.51734320762465,3.77020091612105,2.25415471346161,2.44381593414377,3.49114476901726,5.40045813155453,6.26041717530147,5.01874503130647,3.61097074035162,5.42947521255922,0.592905254174298,1.00107063429656,1.76903095601883,0.449724224769707,1.21716072833102,1.20588579876208,1.01850340712568,0.287696137450811,0.324270453550071,0.549122826376163,0,1.48856379067401,0.936113019343682,0.505157755894224,1.07638448113147,0,1.66277871149944,2.27389694124582,2.28150967018836,2.54617628662782,2.34690248288502,2.34508760418542,2.38043640886014,3.12213836572478,3.4679731703362,3.5434350343804,4.14582398509466,2.94953966488328,1.38147985492716,1.3018415272336,1.50791283939272,2.17562273527484,1.96705709207614,1.65562047782839,9.47248480927973,9.84578167374507,6.22952792431367,1.51482556322624,4.73262329124385,4.29482618726302,3.87762115919038,1.67278158566786,4.01037613348309,3.96307143104365,2.83367491172426,3.50707029493574,3.95287777946523,15.7447445046685,12.4907274983276,3.5613120733451,3.58351310577867,6.59880491890142,0,2.42780636154981,1.51161778482376,0.754420319023592,0.590603785761546,2.45948118355142,1.55056975900933,0.727067458955011,0,0.948110273807448,0,2.06271086496374,5.10659408630682,2.88097750450096,3.49268446213437,2.7863814554107,3.3694644392032,3.38900753443934,4.44282355625727,5.17590413494819,6.10146440965647,7.20229040936989,2.42581237860458,1.15420377059036,2.26050197374268,2.23157822234177,1.07435109602823,1.47726809770555,0.874442509889552,10.198391610578,1.02522528478712,2.68302928352189,2.77791791054568,0.753473828018764,0.546776910884101,1.37266903923914,1.5298058699447,1.11961161858926,1.24379976423981,0,2.84702394223022,1.62655573701479,1.40406943068342,1.46361807210128,1.09181281873089,2.02296519577231,2.14898984885873,1.83229159388821,1.42576470620972,0.621339313086926,2.25477175473676,8.07389348637486,5.79104716599842,7.77804753376191,7.8787492321416,7.7719817725758,12.6745817737414,13.4110516389269,5.34782656571125,2.65742532908607,2.59227005632079,1.26404448251271,3.24360344464263,2.77319584345034,1.29920822977795,2.14832034800978,1.19208812868759,1.08175904567972,0.738447635872886,0.807731599585181,0.533447646584999,0.201652370273681,0.194915761479505,0.192423683280659,0.935015217452552,0.906921534460845,3.1078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| ||
|short_description=p1@Mras | |||
}} | }} |
Latest revision as of 07:43, 27 September 2015
Short description: | p1@Mras |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mras_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 0bp_to_ENSMUST00000035045, NM_008624, uc009rec.1_5end |
EntrezGene: | Mras |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.49e-16 | 43 |
ectodermal cell | 3.88e-16 | 44 |
neurectodermal cell | 3.88e-16 | 44 |
CNS neuron (sensu Vertebrata) | 1.64e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-13 | 23 |
electrically responsive cell | 4.27e-11 | 39 |
electrically active cell | 4.27e-11 | 39 |
neuron | 7.26e-11 | 33 |
neuronal stem cell | 7.26e-11 | 33 |
neuroblast | 7.26e-11 | 33 |
electrically signaling cell | 7.26e-11 | 33 |
embryonic cell | 4.71e-07 | 70 |
migratory neural crest cell | 8.56e-07 | 10 |
neuron associated cell | 8.56e-07 | 10 |
glial cell (sensu Vertebrata) | 8.56e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.56e-07 | 10 |
glial cell | 8.56e-07 | 10 |
glioblast | 8.56e-07 | 10 |
glioblast (sensu Vertebrata) | 8.56e-07 | 10 |