FFCP PHASE1:Mm9::chr9:55938180..55938206,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:55938180..55938206,+
|short_description=p6@Pstpip1
|description=CAGE_peak_6_at_Pstpip1_5end
|association_with_transcript=397bp_to_ENSMUST00000138646,ENSMUS...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19200 | |EntrezGene=19200 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P97814 | |UniProt=P97814 | ||
|association_with_transcript=397bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |||
|cluster_id=chr9:55938180..55938206,+ | |||
|description=CAGE_peak_6_at_Pstpip1_5end | |||
|id=chr9:55938180..55938206,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.63e-17,7;CL:0000049,6.86e-12,19;CL:0002194,4.08e-11,4;CL:0000766,4.08e-11,4;CL:0000234,4.08e-11,4;CL:0000576,4.08e-11,4;CL:0000235,4.08e-11,4;CL:0000864,4.08e-11,4;CL:0002009,4.08e-11,4;CL:0000040,4.08e-11,4;CL:0000559,4.08e-11,4;CL:0002453,2.29e-08,8;CL:0000988,1.25e-07,32;CL:0002032,1.25e-07,32;CL:0000037,1.25e-07,32;CL:0000837,1.25e-07,32;CL:0000680,5.39e-07,6;CL:0000187,5.39e-07,6;CL:0000056,5.39e-07,6;CL:0000763,6.35e-07,16;CL:0000355,9.73e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.60e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.92e-09,32;UBERON:0002371,6.35e-07,16;UBERON:0001134,9.73e-07,9;UBERON:0002036,9.73e-07,9;UBERON:0002385,9.73e-07,9;UBERON:0000486,9.73e-07,9;UBERON:0007503,9.73e-07,9;UBERON:0001015,9.73e-07,9;UBERON:0002329,9.73e-07,9;UBERON:0003082,9.73e-07,9;UBERON:0003059,9.73e-07,9;UBERON:0007282,9.73e-07,9;UBERON:0004290,9.73e-07,9;UBERON:0009618,9.73e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,2.73218193983378,1.45653105909346,1.6366586336825,1.31790010585369,0.550640256485045,0,2.18025156380447,3.51497892375155,4.08302788055995,0.419959264876088,0,0.335565212115473,1.45072428402269,0.672187598284928,2.57259436035947,0,3.09403255366465,0,0,0,0,0,0.899899717281399,0.988866362566974,0,2.39680088414724,3.07374644257244,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.766124028511126,0.921639199537461,0,0,0,1.95428099300967,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,0,0.649473123033642,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,3.83408398418945,2.39961092397363,2.79554499560742,0.449371918214468,0,0,0,0.255715457330331,0.83115217823824,0.811206315338788,0.203678727700633,0.746441823660558,1.76905930903572,0,0,0,0,0,0,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,1.40442637462647,1.54408744268829,1.13665399758237,0,0,0,0,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.350296027101508,0,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0.433947175744535,3.01582567878545,2.71952841909355,0,0.275936746304732,4.65596710964597,2.93029216480508,0.327869890753351,0.757412781613119,0,0,0,0,0,0,0,0,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0,0,2.3467170806371,5.50763384245932,0.220528398054962,0.8244312647074,0.645857706783622,0.482503399425247,0.716234064018819,0.492422699235184,0.291480836629851,5.37733375830478,0,0,0.370389054739423,0,0,0,8.15896463970505,8.25713568709582,6.21899882119907,0,0.158167996790568,0,0,0,0,0.134864346384821,0.330613822901344,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0.288030006257865,0,0.405450430580328,0.821687657318618,0.909445760844565,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.15241361331,0.504130925684203,0.292373642219257,0.192423683280659,0.233753804363138,2.26730383615211,0.665957860122194,0.0897138566094757,0.335769232728157,0.386379188064381,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0,0.290692833264657,0.564656282491984,0.338458431566706,0,0.526139422875686,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,1.62307484934295 | |phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0.171200729931206,0.174840804837995,0.666219523631325,0,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0.0992909512008853,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,2.73218193983378,1.45653105909346,1.6366586336825,1.31790010585369,0.550640256485045,0,2.18025156380447,3.51497892375155,4.08302788055995,0.419959264876088,0,0.335565212115473,1.45072428402269,0.672187598284928,2.57259436035947,0,3.09403255366465,0,0,0,0,0,0.899899717281399,0.988866362566974,0,2.39680088414724,3.07374644257244,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.766124028511126,0.921639199537461,0,0,0,1.95428099300967,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0.519572009205738,0,0.281686839553361,0,0,0,0.649473123033642,0.506719730950197,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0.209446706813455,0,3.83408398418945,2.39961092397363,2.79554499560742,0.449371918214468,0,0,0,0.255715457330331,0.83115217823824,0.811206315338788,0.203678727700633,0.746441823660558,1.76905930903572,0,0,0,0,0,0,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0.348252166522167,0.411564272815887,0,1.40442637462647,1.54408744268829,1.13665399758237,0,0,0,0,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.350296027101508,0,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.390267295715598,0,0.221464689648775,0.159454768657487,0.491589944147214,0.690739927463582,0.433947175744535,3.01582567878545,2.71952841909355,0,0.275936746304732,4.65596710964597,2.93029216480508,0.327869890753351,0.757412781613119,0,0,0,0,0,0,0,0,0.790575555893047,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0.354680467284547,0,0,0,2.3467170806371,5.50763384245932,0.220528398054962,0.8244312647074,0.645857706783622,0.482503399425247,0.716234064018819,0.492422699235184,0.291480836629851,5.37733375830478,0,0,0.370389054739423,0,0,0,8.15896463970505,8.25713568709582,6.21899882119907,0,0.158167996790568,0,0,0,0,0.134864346384821,0.330613822901344,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0.241584120826006,0.288030006257865,0,0.405450430580328,0.821687657318618,0.909445760844565,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.504832249740738,0.15241361331,0.504130925684203,0.292373642219257,0.192423683280659,0.233753804363138,2.26730383615211,0.665957860122194,0.0897138566094757,0.335769232728157,0.386379188064381,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0,0,0,0,0.755393897389701,0,0,0,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.25347929989024,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.532427418478012,0,0.290692833264657,0.564656282491984,0.338458431566706,0,0.526139422875686,0.271608227691724,0.561142271657738,0,0.394017929502254,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.644613162144895,0.57386499620653,0.220591419119515,1.62307484934295 | ||
|short_description=p6@Pstpip1 | |||
}} | }} |
Latest revision as of 21:00, 26 September 2015
Short description: | p6@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pstpip1_5end |
Coexpression cluster: | NA |
Association with transcript: | 397bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | Pstpip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.63e-17 | 7 |
common myeloid progenitor | 6.86e-12 | 19 |
monopoietic cell | 4.08e-11 | 4 |
myeloid leukocyte | 4.08e-11 | 4 |
phagocyte | 4.08e-11 | 4 |
monocyte | 4.08e-11 | 4 |
macrophage | 4.08e-11 | 4 |
tissue-resident macrophage | 4.08e-11 | 4 |
macrophage dendritic cell progenitor | 4.08e-11 | 4 |
monoblast | 4.08e-11 | 4 |
promonocyte | 4.08e-11 | 4 |
oligodendrocyte precursor cell | 2.29e-08 | 8 |
hematopoietic cell | 1.25e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.25e-07 | 32 |
hematopoietic stem cell | 1.25e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.25e-07 | 32 |
muscle precursor cell | 5.39e-07 | 6 |
muscle cell | 5.39e-07 | 6 |
myoblast | 5.39e-07 | 6 |
myeloid cell | 6.35e-07 | 16 |
multi-potent skeletal muscle stem cell | 9.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.92e-09 | 32 |
bone marrow | 6.35e-07 | 16 |
skeletal muscle tissue | 9.73e-07 | 9 |
striated muscle tissue | 9.73e-07 | 9 |
muscle tissue | 9.73e-07 | 9 |
multilaminar epithelium | 9.73e-07 | 9 |
epithelial vesicle | 9.73e-07 | 9 |
musculature | 9.73e-07 | 9 |
somite | 9.73e-07 | 9 |
myotome | 9.73e-07 | 9 |
presomitic mesoderm | 9.73e-07 | 9 |
presumptive segmental plate | 9.73e-07 | 9 |
dermomyotome | 9.73e-07 | 9 |
trunk paraxial mesoderm | 9.73e-07 | 9 |