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FFCP PHASE1:Mm9::chr9:4796160..4796195,-: Difference between revisions

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(Created page with "{{FFCP |id=chr9:4796160..4796195,- |short_description=p2@Gria4 |description=CAGE_peak_2_at_Gria4_5end |association_with_transcript=38bp_to_ENSMUST00000027020,ENSMUST000000...")
 
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{{FFCP
{{FFCP
|id=chr9:4796160..4796195,-
|DHSsupport=NA
|short_description=p2@Gria4
|DPIdataset=NA
|description=CAGE_peak_2_at_Gria4_5end
|association_with_transcript=38bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|EntrezGene=14802
|EntrezGene=14802
|HGNC=
|HGNC=
|MCL_coexpression_id=281
|TSSclassifier=NA
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|UniProt=G5E863,Q9Z2W8,E9PX01,Q8C069
|association_with_transcript=38bp_to_ENSMUST00000027020,ENSMUST00000063508,ENSMUST00000163309,NM_001113180,NM_001113181,NM_019691,uc009obp.2,uc009obq.2,uc012gnm.1_5end
|cluster_id=chr9:4796160..4796195,-
|description=CAGE_peak_2_at_Gria4_5end
|id=chr9:4796160..4796195,-
|ontology_enrichment_celltype=CL:0000540!6.20e-17!33;CL:0000047!6.20e-17!33;CL:0000031!6.20e-17!33;CL:0000404!6.20e-17!33;CL:0000393!6.71e-16!39;CL:0000211!6.71e-16!39;CL:0000221!6.72e-11!44;CL:0000133!6.72e-11!44;CL:0000117!1.35e-10!23;CL:0000337!1.35e-10!23;CL:0002319!1.51e-10!43;CL:0000055!9.29e-10!50;CL:0000107!9.43e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,2.94e-19,33;CL:0000047,2.94e-19,33;CL:0000031,2.94e-19,33;CL:0000404,2.94e-19,33;CL:0000393,2.67e-18,39;CL:0000211,2.67e-18,39;CL:0000117,5.83e-12,23;CL:0000337,5.83e-12,23;CL:0000221,1.11e-11,44;CL:0000133,1.11e-11,44;CL:0002319,2.78e-11,43;CL:0000107,1.09e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.69e-28!102;UBERON:0000924!2.69e-28!102;UBERON:0006601!2.69e-28!102;UBERON:0001017!1.23e-26!73;UBERON:0005743!1.23e-26!73;UBERON:0000073!9.60e-26!75;UBERON:0001016!9.60e-26!75;UBERON:0002346!1.96e-25!71;UBERON:0003075!1.96e-25!71;UBERON:0007284!1.96e-25!71;UBERON:0000033!1.68e-20!63;UBERON:0001049!5.94e-19!52;UBERON:0005068!5.94e-19!52;UBERON:0006241!5.94e-19!52;UBERON:0007135!5.94e-19!52;UBERON:0000955!8.39e-18!50;UBERON:0006238!8.39e-18!50;UBERON:0002616!3.96e-17!49;UBERON:0003056!4.61e-17!49;UBERON:0002020!1.27e-14!34;UBERON:0003080!3.97e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0002791!7.14e-12!29;UBERON:0003528!7.14e-12!29;UBERON:0001893!7.14e-12!29;UBERON:0000956!3.14e-08!21;UBERON:0001869!3.14e-08!21;UBERON:0000203!3.14e-08!21;UBERON:0002410!9.43e-08!9;UBERON:0000468!1.26e-07!333;UBERON:0007811!1.39e-07!86;UBERON:0002619!2.48e-07!17;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-28,73;UBERON:0004121,2.00e-27,95;UBERON:0000924,2.00e-27,95;UBERON:0006601,2.00e-27,95;UBERON:0001016,7.89e-27,75;UBERON:0002346,9.89e-26,64;UBERON:0003075,9.89e-26,64;UBERON:0007284,9.89e-26,64;UBERON:0010371,1.84e-23,73;UBERON:0000073,9.07e-21,54;UBERON:0001049,1.47e-19,52;UBERON:0005068,1.47e-19,52;UBERON:0006241,1.47e-19,52;UBERON:0007135,1.47e-19,52;UBERON:0003056,1.60e-17,49;UBERON:0010314,2.10e-16,92;UBERON:0002020,2.21e-16,34;UBERON:0000955,2.28e-16,47;UBERON:0006238,2.28e-16,47;UBERON:0002616,1.22e-15,46;UBERON:0003080,3.50e-14,40;UBERON:0002780,1.64e-13,39;UBERON:0001890,1.64e-13,39;UBERON:0006240,1.64e-13,39;UBERON:0003528,3.18e-13,29;UBERON:0002791,3.18e-13,29;UBERON:0001893,3.18e-13,29;UBERON:0000956,4.79e-09,21;UBERON:0001869,4.79e-09,21;UBERON:0000203,4.79e-09,21;UBERON:0002410,1.09e-08,9;UBERON:0002021,4.20e-08,10;UBERON:0000411,4.20e-08,10;UBERON:0001950,4.20e-08,10;UBERON:0002619,5.23e-08,17
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.04130793658544,3.30384153891027,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,1.14613375975503,1.54701627683233,5.46254444320914,7.93486468908049,3.80298842103708,0.338844532069132,0,0,0,0,0,0.768436610643109,2.69592992002042,2.29510095163874,3.57552434297349,11.1403883917483,14.5773237028065,6.1245399607477,3.92966431174769,3.67687514644008,18.7196997698961,19.1531007127782,18.279177457493,6.59431438650969,6.86157327018072,8.33461392890816,21.217907924105,8.4414391504752,12.071061574368,21.5078867395777,21.9252388430619,17.5215479075783,0.302904773332736,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.35204995151386,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,6.7659277438793,2.13125834818499,4.15107895060905,2.86373017049983,3.76283862834255,0.628332956648377,0,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,74.9518840349561,64.9284791121711,0.766371165625774,0,0,0,23.2175491077475,10.980014467647,5.02617408451458,20.8589184230732,25.8272611903634,17.2464076984435,18.9822277789276,4.58277137326423,0.124406970610093,0.252722758433675,2.73574412652416,1.17108398666433,3.90833577536904,5.94205028357652,6.17889753126432,6.87168641428411,7.94305065766069,5.99691037182265,5.69147415625834,0.431135985865684,0.567318240503458,0.703804496655795,0.219195732427575,1.11218899690239,0,0.411564272815887,2.7864797354589,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.36014819974445,7.71784592844633,0,0,1.70630600428187,3.48355007790658,2.57734922644187,1.00841762311671,1.77902435075896,1.52180500890047,0,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,6.28366819353509,5.63538678365402,6.51684249105006,8.92181440971078,6.38235961001899,7.46191138066236,1.91893192373483,1.255989822731,0.987177311374404,0.296452627087149,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.325929952884052,0.678980343100753,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,22.3165320083031,25.2005126173237,0,0.504941854408746,59.00003703084,57.0040566673092,60.3185513651837,47.7937595905104,47.2333189054675,49.2553163572568,46.5532306926128,45.007402118342,55.7355766904598,43.6996990333658,0.283880170416537,4.09550888434687,3.4206261464251,4.45419332025846,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0.632073515871632,0,0,8.85142974959849,1.26042765821917,0.646793418913773,0.857348140126369,2.6601035046341,5.70780216326626,5.75921572107423,0.913394847343798,0,0,0.882113592219848,1.97863503529776,1.77610869365496,0.72375509913787,1.43246812803764,0.984845398470368,0.874442509889552,28.370071207608,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.45643094115643,4.64422965533745,3.3454127362315,1.31017538247707,1.48350781023303,1.48776220305605,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.992750942742586,5.05573089694524,1.80823752868824,3.21016638432478,3.87278887530988,1.5624526181274,0.629156066554265,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89784391048286,0.563047426353546,2.19781949120718,0.428736758158132,0,22.5900737046827,16.5717085142584,22.9158205375759,9.79563139359019,23.9778881919725,25.6833925112498,19.5756525067224,20.7147753483141,24.9228324941313,25.3702552758392,0.830298780673413,3.19219898720825,2.39027048055788,2.67417388775123,2.72497111416377,1.47074806760011,2.889207461421,3.09052585858341,2.88827288632634,2.52697211763797,2.28131369901216,3.39527414494937,2.71560371662659,2.68905640100451,3.27382173046996,2.38146845641537,4.40360438590451,2.12200142510076,2.06042950401653,4.12156976376312,4.11443102862498,5.32427418478012,2.38436189947321,3.34296758254356,3.48204707536723,3.04612588410035,3.47563148458268,3.41990624869196,2.98769050460896,2.80571135828869,1.89816028998679,4.33419722452479,1.63692417267876,2.94379998253335,1.54325288784913,3.49734809113124,1.63752125911786,2.14871054048298,1.72159498861959,0.441182838239031,1.15933917810211
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,3.04130793658544,3.30384153891027,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,1.14613375975503,1.54701627683233,5.46254444320914,7.93486468908049,3.80298842103708,0.338844532069132,0,0,0,0,0,0.768436610643109,2.69592992002042,2.29510095163874,3.57552434297349,11.1403883917483,14.5773237028065,6.1245399607477,3.92966431174769,3.67687514644008,18.7196997698961,19.1531007127782,18.279177457493,6.59431438650969,6.86157327018072,8.33461392890816,21.217907924105,8.4414391504752,12.071061574368,21.5078867395777,21.9252388430619,17.5215479075783,0.302904773332736,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,5.35204995151386,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,6.7659277438793,2.13125834818499,4.15107895060905,2.86373017049983,3.76283862834255,0.628332956648377,0,1.15679485535929,0,0.323533699894818,0,0.484875253135222,0,74.9518840349561,64.9284791121711,0.766371165625774,0,0,0,23.2175491077475,10.980014467647,5.02617408451458,20.8589184230732,25.8272611903634,17.2464076984435,18.9822277789276,4.58277137326423,0.124406970610093,0.252722758433675,2.73574412652416,1.17108398666433,3.90833577536904,5.94205028357652,6.17889753126432,6.87168641428411,7.94305065766069,5.99691037182265,5.69147415625834,0.431135985865684,0.567318240503458,0.703804496655795,0.219195732427575,1.11218899690239,0,0.411564272815887,2.7864797354589,0,0,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.36014819974445,7.71784592844633,0,0,1.70630600428187,3.48355007790658,2.57734922644187,1.00841762311671,1.77902435075896,1.52180500890047,0,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,0,0.216138049874694,0.199141273254367,3.41402221715547,6.28366819353509,5.63538678365402,6.51684249105006,8.92181440971078,6.38235961001899,7.46191138066236,1.91893192373483,1.255989822731,0.987177311374404,0.296452627087149,0.333690211432188,0,0.674586337154561,0,0,0.25462585178142,0,0.162135226775035,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.325929952884052,0.678980343100753,0.704070744865506,0.335012514883631,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0.275936746304732,22.3165320083031,25.2005126173237,0,0.504941854408746,59.00003703084,57.0040566673092,60.3185513651837,47.7937595905104,47.2333189054675,49.2553163572568,46.5532306926128,45.007402118342,55.7355766904598,43.6996990333658,0.283880170416537,4.09550888434687,3.4206261464251,4.45419332025846,0,0.485561272309963,0.604647113929502,0.188605079755898,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,1.06949213515416,0.632073515871632,0,0,8.85142974959849,1.26042765821917,0.646793418913773,0.857348140126369,2.6601035046341,5.70780216326626,5.75921572107423,0.913394847343798,0,0,0.882113592219848,1.97863503529776,1.77610869365496,0.72375509913787,1.43246812803764,0.984845398470368,0.874442509889552,28.370071207608,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,2.53068794864908,3.45643094115643,4.64422965533745,3.3454127362315,1.31017538247707,1.48350781023303,1.48776220305605,1.04702376793612,0.518459893167171,1.24267862617385,0,1.19613236835183,0.992750942742586,5.05573089694524,1.80823752868824,3.21016638432478,3.87278887530988,1.5624526181274,0.629156066554265,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89784391048286,0.563047426353546,2.19781949120718,0.428736758158132,0,22.5900737046827,16.5717085142584,22.9158205375759,9.79563139359019,23.9778881919725,25.6833925112498,19.5756525067224,20.7147753483141,24.9228324941313,25.3702552758392,0.830298780673413,3.19219898720825,2.39027048055788,2.67417388775123,2.72497111416377,1.47074806760011,2.889207461421,3.09052585858341,2.88827288632634,2.52697211763797,2.28131369901216,3.39527414494937,2.71560371662659,2.68905640100451,3.27382173046996,2.38146845641537,4.40360438590451,2.12200142510076,2.06042950401653,4.12156976376312,4.11443102862498,5.32427418478012,2.38436189947321,3.34296758254356,3.48204707536723,3.04612588410035,3.47563148458268,3.41990624869196,2.98769050460896,2.80571135828869,1.89816028998679,4.33419722452479,1.63692417267876,2.94379998253335,1.54325288784913,3.49734809113124,1.63752125911786,2.14871054048298,1.72159498861959,0.441182838239031,1.15933917810211
|short_description=p2@Gria4
}}
}}

Latest revision as of 18:44, 26 September 2015

Short description:p2@Gria4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gria4_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 38bp_to_ENSMUST00000027020, ENSMUST00000063508, ENSMUST00000163309, NM_001113180, NM_001113181, NM_019691, uc009obp.2, uc009obq.2, uc012gnm.1_5end
EntrezGene:Gria4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gria4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C56.77
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B274.95
cerebellum, neonate N30.CNhs11135.1395-42I264.93
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.22
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D520.86
cortex, neonate N30.CNhs11107.1392-42F225.83
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G76.38
kidney, neonate N10.CNhs11206.758-6D57.46
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C222.32
medulla oblongata, neonate N30.CNhs11200.1396-42A325.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E159.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E360.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D747.79
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D847.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D949.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D446.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D545.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D655.74
olfactory brain, adult.CNhs10489.18-22I943.70
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C928.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I51.81
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.22e-2873
ectoderm-derived structure2.00e-2795
ectoderm2.00e-2795
presumptive ectoderm2.00e-2795
nervous system7.89e-2775
neurectoderm9.89e-2664
neural plate9.89e-2664
presumptive neural plate9.89e-2664
ecto-epithelium1.84e-2373
regional part of nervous system9.07e-2154
neural tube1.47e-1952
neural rod1.47e-1952
future spinal cord1.47e-1952
neural keel1.47e-1952
pre-chordal neural plate1.60e-1749
structure with developmental contribution from neural crest2.10e-1692
gray matter2.21e-1634
brain2.28e-1647
future brain2.28e-1647
regional part of brain1.22e-1546
anterior neural tube3.50e-1440
regional part of forebrain1.64e-1339
forebrain1.64e-1339
future forebrain1.64e-1339
brain grey matter3.18e-1329
regional part of telencephalon3.18e-1329
telencephalon3.18e-1329
cerebral cortex4.79e-0921
cerebral hemisphere4.79e-0921
pallium4.79e-0921
autonomic nervous system1.09e-089
occipital lobe4.20e-0810
visual cortex4.20e-0810
neocortex4.20e-0810
regional part of cerebral cortex5.23e-0817
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