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FFCP PHASE1:Mm9::chr9:37175212..37175241,+: Difference between revisions

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(Created page with "{{FFCP |id=chr9:37175212..37175241,+ |short_description=p1@Hepacam |description=CAGE_peak_1_at_Hepacam_5end |association_with_transcript=21bp_to_NM_175189,uc009our.1_5end ...")
 
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{{FFCP
{{FFCP
|id=chr9:37175212..37175241,+
|DHSsupport=NA
|short_description=p1@Hepacam
|DPIdataset=NA
|description=CAGE_peak_1_at_Hepacam_5end
|association_with_transcript=21bp_to_NM_175189,uc009our.1_5end
|EntrezGene=72927
|EntrezGene=72927
|HGNC=
|HGNC=
|MCL_coexpression_id=283
|TSSclassifier=NA
|UniProt=B2RSY3,Q640R3
|UniProt=B2RSY3,Q640R3
|association_with_transcript=21bp_to_NM_175189,uc009our.1_5end
|cluster_id=chr9:37175212..37175241,+
|description=CAGE_peak_1_at_Hepacam_5end
|id=chr9:37175212..37175241,+
|ontology_enrichment_celltype=CL:0000221!6.94e-17!44;CL:0000133!6.94e-17!44;CL:0002319!2.73e-16!43;CL:0000117!2.44e-14!23;CL:0000337!2.44e-14!23;CL:0000055!5.75e-12!50;CL:0000540!3.68e-10!33;CL:0000047!3.68e-10!33;CL:0000031!3.68e-10!33;CL:0000404!3.68e-10!33;CL:0002453!8.05e-08!8;CL:0000333!9.60e-08!10;CL:0000095!9.60e-08!10;CL:0000243!9.60e-08!10;CL:0000123!9.60e-08!10;CL:0000125!9.60e-08!10;CL:0000030!9.60e-08!10;CL:0000339!9.60e-08!10;CL:0000393!3.79e-07!39;CL:0000211!3.79e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.40e-16,44;CL:0000133,3.40e-16,44;CL:0002319,1.66e-15,43;CL:0000117,4.15e-15,23;CL:0000337,4.15e-15,23;CL:0002453,2.26e-09,8;CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000333,3.35e-08,10;CL:0000095,3.35e-08,10;CL:0000243,3.35e-08,10;CL:0000123,3.35e-08,10;CL:0000125,3.35e-08,10;CL:0000030,3.35e-08,10;CL:0000339,3.35e-08,10;CL:0000128,2.97e-07,6;CL:0000126,2.97e-07,6;CL:0000127,2.97e-07,6;CL:0000393,9.05e-07,39;CL:0000211,9.05e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.82e-34!75;UBERON:0001016!7.82e-34!75;UBERON:0001017!2.07e-33!73;UBERON:0005743!2.07e-33!73;UBERON:0001049!7.88e-29!52;UBERON:0005068!7.88e-29!52;UBERON:0006241!7.88e-29!52;UBERON:0007135!7.88e-29!52;UBERON:0000955!1.93e-27!50;UBERON:0006238!1.93e-27!50;UBERON:0002616!1.20e-26!49;UBERON:0004121!3.90e-26!102;UBERON:0000924!3.90e-26!102;UBERON:0006601!3.90e-26!102;UBERON:0000033!1.50e-25!63;UBERON:0002020!4.21e-22!34;UBERON:0002346!3.58e-21!71;UBERON:0003075!3.58e-21!71;UBERON:0007284!3.58e-21!71;UBERON:0003080!3.67e-19!40;UBERON:0002791!1.79e-18!29;UBERON:0003528!1.79e-18!29;UBERON:0001893!1.79e-18!29;UBERON:0002780!2.60e-18!39;UBERON:0001890!2.60e-18!39;UBERON:0006240!2.60e-18!39;UBERON:0003056!2.19e-17!49;UBERON:0007811!5.80e-14!86;UBERON:0000956!5.29e-13!21;UBERON:0001869!5.29e-13!21;UBERON:0000203!5.29e-13!21;UBERON:0002619!6.03e-12!17;UBERON:0000153!4.70e-11!94;UBERON:0003076!2.43e-10!12;UBERON:0003057!2.43e-10!12;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-34,73;UBERON:0001016,4.43e-34,75;UBERON:0000073,1.51e-32,54;UBERON:0001049,1.71e-30,52;UBERON:0005068,1.71e-30,52;UBERON:0006241,1.71e-30,52;UBERON:0007135,1.71e-30,52;UBERON:0004121,5.25e-26,95;UBERON:0000924,5.25e-26,95;UBERON:0006601,5.25e-26,95;UBERON:0000955,1.08e-25,47;UBERON:0006238,1.08e-25,47;UBERON:0002616,9.08e-25,46;UBERON:0002020,1.24e-24,34;UBERON:0002346,3.66e-24,64;UBERON:0003075,3.66e-24,64;UBERON:0007284,3.66e-24,64;UBERON:0010371,2.98e-21,73;UBERON:0003528,3.57e-20,29;UBERON:0002791,3.57e-20,29;UBERON:0001893,3.57e-20,29;UBERON:0003080,5.42e-19,40;UBERON:0002780,5.33e-18,39;UBERON:0001890,5.33e-18,39;UBERON:0006240,5.33e-18,39;UBERON:0003056,1.42e-15,49;UBERON:0002619,1.63e-14,17;UBERON:0010314,1.74e-13,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0003076,1.64e-12,12;UBERON:0003057,1.64e-12,12;UBERON:0002021,3.14e-09,10;UBERON:0000411,3.14e-09,10;UBERON:0001950,3.14e-09,10;UBERON:0002420,5.57e-08,8;UBERON:0007245,5.57e-08,8;UBERON:0010009,5.57e-08,8;UBERON:0010011,5.57e-08,8;UBERON:0000454,5.57e-08,8;UBERON:0004733,2.97e-07,6;UBERON:0004732,2.97e-07,6;UBERON:0002028,2.97e-07,6;UBERON:0007277,2.97e-07,6;UBERON:0002240,8.86e-07,6;UBERON:0005174,8.86e-07,6;UBERON:0001137,8.86e-07,6
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,121.87606241667,122.145517600366,80.6884081158276,62.0139847800356,153.81524387052,0,0,0,0,0,0,7.68802551266472,6.34789175126439,6.33831403506179,4.74382344896785,5.33576877666684,0,0.988866362566974,0,87.1836321608558,217.467560812,0.622137673850866,0.810035629990144,1.26194976810829,67.1279813348938,65.156219580726,3.30725157880376,2.49198224647415,5.51531271966013,89.1938636095048,70.8664726372792,90.0134284881587,6.72620067423989,6.58711033937349,8.85552729946492,84.5924486974184,74.8474271342134,73.4959571806457,40.6587447953661,39.2945839005524,15.4711540034999,0.302904773332736,1.058001841495,0,0,0,0,0,0,1.68533304158102,0,0,0,10.7040999030277,0,0,0,0,0,0,1.94112595522402,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,65.5828985305866,71.0024336097613,0,0,0,0,106.351353977424,69.5400916284312,17.3403005915753,53.7117149394134,42.1930504595045,91.0111635170873,90.0439010026055,0,0,0,2.52530227063769,0,0,0,0,0.204109497453984,0.512454881139399,0.655912071918102,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,27.5784361176482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,135.183596769721,127.409103325725,0,1.00988370881749,0,0,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,53.9819811588636,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0,0.891844088010353,0.493647061806363,2.74018454203139,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0,163.359691071259,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,1.17183946359555,1.36317147753424,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,32.1908550291728,29.4608151364593,30.363462212288,26.1216837162405,29.4585483501376,38.5250887668747,39.8263275136765,30.621841819247,36.7045351277206,26.9235362110946,0,0,0.341467211508268,0.486213434136588,0.838452650511929,0.735374033800057,1.77797382241292,1.85431551515005,1.60459604795908,2.02157769411038,1.2673964994512,2.07488975524684,1.77918864192777,2.11283002936069,2.41228969613576,3.81034953026459,1.85414921511769,1.35036454324594,1.64834360321323,3.23837624295674,1.37147700954166,1.24233064311536,2.14592570952589,3.0522747492789,2.72917203204459,2.28459441307527,2.37806364734604,2.63069711437843,2.17286582153379,1.12228454331548,2.25406534435931,1.0835493061312,1.22769312950907,3.25367366490529,2.70069255373598,5.9954538705107,1.63752125911786,3.00819475667618,2.86932498103265,2.8676884485537,4.17362104116759
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,121.87606241667,122.145517600366,80.6884081158276,62.0139847800356,153.81524387052,0,0,0,0,0,0,7.68802551266472,6.34789175126439,6.33831403506179,4.74382344896785,5.33576877666684,0,0.988866362566974,0,87.1836321608558,217.467560812,0.622137673850866,0.810035629990144,1.26194976810829,67.1279813348938,65.156219580726,3.30725157880376,2.49198224647415,5.51531271966013,89.1938636095048,70.8664726372792,90.0134284881587,6.72620067423989,6.58711033937349,8.85552729946492,84.5924486974184,74.8474271342134,73.4959571806457,40.6587447953661,39.2945839005524,15.4711540034999,0.302904773332736,1.058001841495,0,0,0,0,0,0,1.68533304158102,0,0,0,10.7040999030277,0,0,0,0,0,0,1.94112595522402,0,0.29688427812965,0,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,65.5828985305866,71.0024336097613,0,0,0,0,106.351353977424,69.5400916284312,17.3403005915753,53.7117149394134,42.1930504595045,91.0111635170873,90.0439010026055,0,0,0,2.52530227063769,0,0,0,0,0.204109497453984,0.512454881139399,0.655912071918102,4.9153640440413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,27.5784361176482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,135.183596769721,127.409103325725,0,1.00988370881749,0,0,0,0,0.445597348164788,0,0,0.584511715822624,0.395287777946524,53.9819811588636,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,2.38307724027652,0,0.129358683782755,0,0,0.891844088010353,0.493647061806363,2.74018454203139,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0,0,0,163.359691071259,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,1.17183946359555,1.36317147753424,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0,0,0,32.1908550291728,29.4608151364593,30.363462212288,26.1216837162405,29.4585483501376,38.5250887668747,39.8263275136765,30.621841819247,36.7045351277206,26.9235362110946,0,0,0.341467211508268,0.486213434136588,0.838452650511929,0.735374033800057,1.77797382241292,1.85431551515005,1.60459604795908,2.02157769411038,1.2673964994512,2.07488975524684,1.77918864192777,2.11283002936069,2.41228969613576,3.81034953026459,1.85414921511769,1.35036454324594,1.64834360321323,3.23837624295674,1.37147700954166,1.24233064311536,2.14592570952589,3.0522747492789,2.72917203204459,2.28459441307527,2.37806364734604,2.63069711437843,2.17286582153379,1.12228454331548,2.25406534435931,1.0835493061312,1.22769312950907,3.25367366490529,2.70069255373598,5.9954538705107,1.63752125911786,3.00819475667618,2.86932498103265,2.8676884485537,4.17362104116759
|short_description=p1@Hepacam
}}
}}

Latest revision as of 14:42, 26 September 2015

Short description:p1@Hepacam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hepacam_5end
Coexpression cluster:MCL_coexpression_mm9:283
Association with transcript: 21bp_to_NM_175189, uc009our.1_5end
EntrezGene:Hepacam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hepacam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2121.88
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8122.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C380.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C462.01
Mouse Astrocytes, donor3.CNhs12107.11633-122C4153.82
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C887.18
Mouse Microglia, donor2.CNhs12634.11736-123E8217.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F167.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D565.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D389.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D790.01
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E484.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E574.85
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.29
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B265.58
cerebellum, neonate N30.CNhs11135.1395-42I271.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4106.35
corpus striatum, adult.CNhs10487.19-21D869.54
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D553.71
cortex, neonate N30.CNhs11107.1392-42F242.19
diencephalon, adult.CNhs10482.20-12F291.01
diencephalon, neonate N30.CNhs11201.1388-42B290.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E862.04
hippocampus, neonate N00.CNhs11228.627-43G127.58
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2135.18
medulla oblongata, neonate N30.CNhs11200.1396-42A3127.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I953.98
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C9163.36
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A538.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B44.17





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.90e-3473
nervous system4.43e-3475
regional part of nervous system1.51e-3254
neural tube1.71e-3052
neural rod1.71e-3052
future spinal cord1.71e-3052
neural keel1.71e-3052
ectoderm-derived structure5.25e-2695
ectoderm5.25e-2695
presumptive ectoderm5.25e-2695
brain1.08e-2547
future brain1.08e-2547
regional part of brain9.08e-2546
gray matter1.24e-2434
neurectoderm3.66e-2464
neural plate3.66e-2464
presumptive neural plate3.66e-2464
ecto-epithelium2.98e-2173
brain grey matter3.57e-2029
regional part of telencephalon3.57e-2029
telencephalon3.57e-2029
anterior neural tube5.42e-1940
regional part of forebrain5.33e-1839
forebrain5.33e-1839
future forebrain5.33e-1839
pre-chordal neural plate1.42e-1549
regional part of cerebral cortex1.63e-1417
structure with developmental contribution from neural crest1.74e-1392
cerebral cortex1.77e-1321
cerebral hemisphere1.77e-1321
pallium1.77e-1321
posterior neural tube1.64e-1212
chordal neural plate1.64e-1212
occipital lobe3.14e-0910
visual cortex3.14e-0910
neocortex3.14e-0910
basal ganglion5.57e-088
nuclear complex of neuraxis5.57e-088
aggregate regional part of brain5.57e-088
collection of basal ganglia5.57e-088
cerebral subcortex5.57e-088
segmental subdivision of hindbrain2.97e-076
segmental subdivision of nervous system2.97e-076
hindbrain2.97e-076
presumptive hindbrain2.97e-076
spinal cord8.86e-076
dorsal region element8.86e-076
dorsum8.86e-076
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