Personal tools

FFCP PHASE1:Mm9::chr9:111214308..111214344,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:111214308..111214344,+ |short_description=p2@Trank1 |description=CAGE_peak_2_at_Trank1_5end |association_with_transcript=65bp_to_ENSMUST00000078626,NM_0011...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:111214308..111214344,+
|DHSsupport=NA
|short_description=p2@Trank1
|DPIdataset=NA
|description=CAGE_peak_2_at_Trank1_5end
|association_with_transcript=65bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end
|EntrezGene=320429
|EntrezGene=320429
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BV79
|UniProt=Q8BV79
|association_with_transcript=65bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end
|cluster_id=chr9:111214308..111214344,+
|description=CAGE_peak_2_at_Trank1_5end
|id=chr9:111214308..111214344,+
|ontology_enrichment_celltype=CL:0000117!1.07e-10!23;CL:0000337!1.07e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.85e-11,23;CL:0000337,2.85e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.00e-20!71;UBERON:0003075!9.00e-20!71;UBERON:0007284!9.00e-20!71;UBERON:0002020!6.15e-18!34;UBERON:0001049!1.73e-17!52;UBERON:0005068!1.73e-17!52;UBERON:0006241!1.73e-17!52;UBERON:0007135!1.73e-17!52;UBERON:0004121!7.06e-17!102;UBERON:0000924!7.06e-17!102;UBERON:0006601!7.06e-17!102;UBERON:0000955!2.00e-16!50;UBERON:0006238!2.00e-16!50;UBERON:0000033!5.65e-16!63;UBERON:0002616!1.27e-15!49;UBERON:0000073!1.69e-15!75;UBERON:0001016!1.69e-15!75;UBERON:0001017!2.29e-15!73;UBERON:0005743!2.29e-15!73;UBERON:0002791!1.75e-14!29;UBERON:0003528!1.75e-14!29;UBERON:0001893!1.75e-14!29;UBERON:0003056!9.83e-13!49;UBERON:0003080!2.45e-12!40;UBERON:0002780!1.19e-11!39;UBERON:0001890!1.19e-11!39;UBERON:0006240!1.19e-11!39;UBERON:0002021!9.96e-10!10;UBERON:0000411!9.96e-10!10;UBERON:0001950!9.96e-10!10;UBERON:0000956!3.71e-09!21;UBERON:0001869!3.71e-09!21;UBERON:0000203!3.71e-09!21;UBERON:0002619!4.11e-09!17;UBERON:0000991!1.25e-07!18;UBERON:0005564!1.25e-07!18;UBERON:0007811!1.55e-07!86;UBERON:0003133!2.06e-07!24;UBERON:0004176!2.77e-07!17;UBERON:0009196!2.77e-07!17;UBERON:0009117!2.77e-07!17;UBERON:0005156!6.99e-07!26;UBERON:0000990!6.99e-07!26;UBERON:0002420!7.25e-07!8;UBERON:0007245!7.25e-07!8;UBERON:0010009!7.25e-07!8;UBERON:0010011!7.25e-07!8;UBERON:0000454!7.25e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-21,54;UBERON:0001049,1.00e-19,52;UBERON:0005068,1.00e-19,52;UBERON:0006241,1.00e-19,52;UBERON:0007135,1.00e-19,52;UBERON:0002020,1.01e-19,34;UBERON:0001017,6.29e-18,73;UBERON:0002346,1.07e-17,64;UBERON:0003075,1.07e-17,64;UBERON:0007284,1.07e-17,64;UBERON:0001016,4.64e-17,75;UBERON:0000955,8.53e-16,47;UBERON:0006238,8.53e-16,47;UBERON:0003528,2.56e-15,29;UBERON:0002791,2.56e-15,29;UBERON:0001893,2.56e-15,29;UBERON:0002616,7.80e-15,46;UBERON:0010371,7.11e-14,73;UBERON:0004121,1.65e-13,95;UBERON:0000924,1.65e-13,95;UBERON:0006601,1.65e-13,95;UBERON:0010314,4.62e-13,92;UBERON:0003080,8.25e-13,40;UBERON:0003056,1.68e-12,49;UBERON:0002021,2.05e-12,10;UBERON:0000411,2.05e-12,10;UBERON:0001950,2.05e-12,10;UBERON:0002780,5.72e-12,39;UBERON:0001890,5.72e-12,39;UBERON:0006240,5.72e-12,39;UBERON:0002619,6.99e-10,17;UBERON:0000956,1.10e-08,21;UBERON:0001869,1.10e-08,21;UBERON:0000203,1.10e-08,21;UBERON:0002420,1.28e-08,8;UBERON:0007245,1.28e-08,8;UBERON:0010009,1.28e-08,8;UBERON:0010011,1.28e-08,8;UBERON:0000454,1.28e-08,8;UBERON:0003076,4.82e-08,12;UBERON:0003057,4.82e-08,12;UBERON:0000991,6.03e-08,18;UBERON:0005564,6.03e-08,18;UBERON:0004176,1.71e-07,17;UBERON:0009196,1.71e-07,17;UBERON:0009117,1.71e-07,17;UBERON:0003133,5.79e-07,24;UBERON:0002240,9.83e-07,6;UBERON:0005174,9.83e-07,6;UBERON:0001137,9.83e-07,6;UBERON:0003135,9.97e-07,15
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71841992193451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,3.70293685490423,5.07065122804943,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,10.5690864229407,11.7060326704355,1.22490799214954,0.670918297127655,0,15.4162233399144,16.343979274904,13.9781945263182,3.42904348098504,3.93396867490361,6.77187381723788,12.0048689570594,20.2594539611405,19.5581757154317,18.2669722993674,14.6642831223076,6.15118171223492,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,5.78924342352817,0.693941307064543,3.04465478312141,1.61430848079241,4.37095657602605,5.87943535678524,4.39833069653864,0.741584903203122,0,0,0,0,0,0,11.7112318804619,11.3101221679266,0,0,0,0,26.6627338140584,62.2200819833332,14.3245961408665,40.5010666048004,40.1473268008619,19.7398642331582,32.772735139687,1.62942982160506,1.7416975885413,6.82351447770922,2.10441855886474,0,0,0,0.452114453507145,0.612328492361951,1.0249097622788,1.68663104207512,8.79591460512653,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.0669716673886,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6468001489623,12.8932855251423,0,0,0,0,0,0,0,0,0,0,0.395287777946524,41.7717711348349,1.13552068166615,1.6025904330053,2.93196526836437,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0.119372344003136,0,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,2.25477175473676,0.598066184175915,0.496375471371293,2.72231663681667,2.71235629303235,2.19642963138012,3.99014611395563,1.8228613878153,4.29923312145414,4.59009829569411,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0,0,28.8023439734704,24.8575627713876,28.6447756719698,26.8090964456153,34.9392085083028,36.2589070747056,29.0259675099676,39.6282658837314,40.7828168085784,46.080667745912,0,0,0,0,0.838452650511929,1.47074806760011,1.11123363900808,1.03017528619447,0.320919209591815,2.02157769411038,1.52087579934144,0.565879024158229,1.31098110457835,1.60062881012173,0.804096565378586,0.952587382566147,1.39061191133827,1.15745532278223,1.23625770240992,1.17759136107518,1.02860775715625,0.177475806159338,0.476872379894642,1.0174249164263,1.59985946706062,1.26921911837515,1.82927972872773,0.789209134313529,0.950628796921032,1.12228454331548,1.42362021749009,1.47756723563345,0.818462086339379,1.23949472948773,0.964533054905707,2.74791635731741,1.87145286756327,1.28922632428979,1.14772999241306,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71841992193451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0.257259436035947,0,0,1.82084814773638,3.70293685490423,5.07065122804943,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,10.5690864229407,11.7060326704355,1.22490799214954,0.670918297127655,0,15.4162233399144,16.343979274904,13.9781945263182,3.42904348098504,3.93396867490361,6.77187381723788,12.0048689570594,20.2594539611405,19.5581757154317,18.2669722993674,14.6642831223076,6.15118171223492,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.216491041011214,0,0,0.68510327831436,0,5.78924342352817,0.693941307064543,3.04465478312141,1.61430848079241,4.37095657602605,5.87943535678524,4.39833069653864,0.741584903203122,0,0,0,0,0,0,11.7112318804619,11.3101221679266,0,0,0,0,26.6627338140584,62.2200819833332,14.3245961408665,40.5010666048004,40.1473268008619,19.7398642331582,32.772735139687,1.62942982160506,1.7416975885413,6.82351447770922,2.10441855886474,0,0,0,0.452114453507145,0.612328492361951,1.0249097622788,1.68663104207512,8.79591460512653,0,0.189106080167819,0,0.219195732427575,0,0.348252166522167,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.0669716673886,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0.420814919341911,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6468001489623,12.8932855251423,0,0,0,0,0,0,0,0,0,0,0.395287777946524,41.7717711348349,1.13552068166615,1.6025904330053,2.93196526836437,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0,0,0,0,0.177340233642274,0.356737635204141,0,0,0.23467170806371,1.90648863777438,0,0,0,0,0.119372344003136,0,0,11.1255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,2.25477175473676,0.598066184175915,0.496375471371293,2.72231663681667,2.71235629303235,2.19642963138012,3.99014611395563,1.8228613878153,4.29923312145414,4.59009829569411,2.88030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.221985953374065,0,0,0,0.187682475451182,0,0,0,28.8023439734704,24.8575627713876,28.6447756719698,26.8090964456153,34.9392085083028,36.2589070747056,29.0259675099676,39.6282658837314,40.7828168085784,46.080667745912,0,0,0,0,0.838452650511929,1.47074806760011,1.11123363900808,1.03017528619447,0.320919209591815,2.02157769411038,1.52087579934144,0.565879024158229,1.31098110457835,1.60062881012173,0.804096565378586,0.952587382566147,1.39061191133827,1.15745532278223,1.23625770240992,1.17759136107518,1.02860775715625,0.177475806159338,0.476872379894642,1.0174249164263,1.59985946706062,1.26921911837515,1.82927972872773,0.789209134313529,0.950628796921032,1.12228454331548,1.42362021749009,1.47756723563345,0.818462086339379,1.23949472948773,0.964533054905707,2.74791635731741,1.87145286756327,1.28922632428979,1.14772999241306,0.220591419119515,0.231867835620421
|short_description=p2@Trank1
}}
}}

Latest revision as of 06:16, 26 September 2015

Short description:p2@Trank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trank1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 65bp_to_ENSMUST00000078626, NM_001164659, uc009rvt.2, uc012hbq.1_5end
EntrezGene:Trank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.15
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I211.31
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A426.66
corpus striatum, adult.CNhs10487.19-21D862.22
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D540.50
cortex, neonate N30.CNhs11107.1392-42F240.15
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B232.77
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E834.07
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A312.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I941.77
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A739.63
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.08
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.85e-1123
neuroblast (sensu Vertebrata)2.85e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.33e-2154
neural tube1.00e-1952
neural rod1.00e-1952
future spinal cord1.00e-1952
neural keel1.00e-1952
gray matter1.01e-1934
central nervous system6.29e-1873
neurectoderm1.07e-1764
neural plate1.07e-1764
presumptive neural plate1.07e-1764
nervous system4.64e-1775
brain8.53e-1647
future brain8.53e-1647
brain grey matter2.56e-1529
regional part of telencephalon2.56e-1529
telencephalon2.56e-1529
regional part of brain7.80e-1546
ecto-epithelium7.11e-1473
ectoderm-derived structure1.65e-1395
ectoderm1.65e-1395
presumptive ectoderm1.65e-1395
structure with developmental contribution from neural crest4.62e-1392
anterior neural tube8.25e-1340
pre-chordal neural plate1.68e-1249
occipital lobe2.05e-1210
visual cortex2.05e-1210
neocortex2.05e-1210
regional part of forebrain5.72e-1239
forebrain5.72e-1239
future forebrain5.72e-1239
regional part of cerebral cortex6.99e-1017
cerebral cortex1.10e-0821
cerebral hemisphere1.10e-0821
pallium1.10e-0821
basal ganglion1.28e-088
nuclear complex of neuraxis1.28e-088
aggregate regional part of brain1.28e-088
collection of basal ganglia1.28e-088
cerebral subcortex1.28e-088
posterior neural tube4.82e-0812
chordal neural plate4.82e-0812
gonad6.03e-0818
gonad primordium6.03e-0818
external genitalia1.71e-0717
indifferent external genitalia1.71e-0717
indifferent gonad1.71e-0717
reproductive organ5.79e-0724
spinal cord9.83e-076
dorsal region element9.83e-076
dorsum9.83e-076
male reproductive organ9.97e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:111214308..111214344,%2B&oldid=4237722"