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FFCP PHASE1:Mm9::chr9:111214043..111214055,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:111214043..111214055,+
|DHSsupport=NA
|short_description=p1@Trank1
|DPIdataset=NA
|description=CAGE_peak_1_at_Trank1_5end
|association_with_transcript=-187bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end
|EntrezGene=320429
|EntrezGene=320429
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BV79
|UniProt=Q8BV79
|association_with_transcript=-187bp_to_ENSMUST00000078626,NM_001164659,uc009rvt.2,uc012hbq.1_5end
|cluster_id=chr9:111214043..111214055,+
|description=CAGE_peak_1_at_Trank1_5end
|id=chr9:111214043..111214055,+
|ontology_enrichment_celltype=CL:0000117!1.55e-09!23;CL:0000337!1.55e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.08e-12,23;CL:0000337,3.08e-12,23;CL:0000540,6.45e-07,33;CL:0000047,6.45e-07,33;CL:0000031,6.45e-07,33;CL:0000404,6.45e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.40e-17!71;UBERON:0003075!3.40e-17!71;UBERON:0007284!3.40e-17!71;UBERON:0002020!2.83e-14!34;UBERON:0001049!3.18e-14!52;UBERON:0005068!3.18e-14!52;UBERON:0006241!3.18e-14!52;UBERON:0007135!3.18e-14!52;UBERON:0004121!2.24e-13!102;UBERON:0000924!2.24e-13!102;UBERON:0006601!2.24e-13!102;UBERON:0000991!4.43e-13!18;UBERON:0005564!4.43e-13!18;UBERON:0000955!4.66e-13!50;UBERON:0006238!4.66e-13!50;UBERON:0000033!1.32e-12!63;UBERON:0004176!2.13e-12!17;UBERON:0009196!2.13e-12!17;UBERON:0009117!2.13e-12!17;UBERON:0002616!2.35e-12!49;UBERON:0001017!1.22e-11!73;UBERON:0005743!1.22e-11!73;UBERON:0003135!1.60e-11!15;UBERON:0000073!2.41e-11!75;UBERON:0001016!2.41e-11!75;UBERON:0002791!3.13e-11!29;UBERON:0003528!3.13e-11!29;UBERON:0001893!3.13e-11!29;UBERON:0003133!1.15e-10!24;UBERON:0000473!1.21e-10!14;UBERON:0003101!2.13e-10!16;UBERON:0000079!2.13e-10!16;UBERON:0003080!2.62e-10!40;UBERON:0003056!5.30e-10!49;UBERON:0005156!6.39e-10!26;UBERON:0000990!6.39e-10!26;UBERON:0002780!9.63e-10!39;UBERON:0001890!9.63e-10!39;UBERON:0006240!9.63e-10!39;UBERON:0002619!1.03e-07!17;UBERON:0002021!2.40e-07!10;UBERON:0000411!2.40e-07!10;UBERON:0001950!2.40e-07!10;UBERON:0000956!5.20e-07!21;UBERON:0001869!5.20e-07!21;UBERON:0000203!5.20e-07!21;UBERON:0002369!5.26e-07!7;UBERON:0006858!5.26e-07!7
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.31e-19,54;UBERON:0002020,2.80e-19,34;UBERON:0001049,3.47e-18,52;UBERON:0005068,3.47e-18,52;UBERON:0006241,3.47e-18,52;UBERON:0007135,3.47e-18,52;UBERON:0000991,7.27e-18,18;UBERON:0005564,7.27e-18,18;UBERON:0004176,6.45e-17,17;UBERON:0009196,6.45e-17,17;UBERON:0009117,6.45e-17,17;UBERON:0001017,2.65e-16,73;UBERON:0003135,1.05e-15,15;UBERON:0002346,1.24e-15,64;UBERON:0003075,1.24e-15,64;UBERON:0007284,1.24e-15,64;UBERON:0001016,1.60e-15,75;UBERON:0003133,1.98e-15,24;UBERON:0003528,4.80e-15,29;UBERON:0002791,4.80e-15,29;UBERON:0001893,4.80e-15,29;UBERON:0000955,1.04e-14,47;UBERON:0006238,1.04e-14,47;UBERON:0000473,1.76e-14,14;UBERON:0003101,2.07e-14,16;UBERON:0000079,2.07e-14,16;UBERON:0002616,8.65e-14,46;UBERON:0010314,8.99e-14,92;UBERON:0005156,9.91e-14,26;UBERON:0000990,9.91e-14,26;UBERON:0003080,1.86e-12,40;UBERON:0010371,2.86e-12,73;UBERON:0004121,8.16e-12,95;UBERON:0000924,8.16e-12,95;UBERON:0006601,8.16e-12,95;UBERON:0002780,1.06e-11,39;UBERON:0001890,1.06e-11,39;UBERON:0006240,1.06e-11,39;UBERON:0003056,1.89e-11,49;UBERON:0002619,1.40e-10,17;UBERON:0002021,1.34e-09,10;UBERON:0000411,1.34e-09,10;UBERON:0001950,1.34e-09,10;UBERON:0000956,3.46e-09,21;UBERON:0001869,3.46e-09,21;UBERON:0000203,3.46e-09,21;UBERON:0002369,3.96e-09,7;UBERON:0006858,3.96e-09,7;UBERON:0003064,1.27e-07,14;UBERON:0002420,1.64e-07,8;UBERON:0007245,1.64e-07,8;UBERON:0010009,1.64e-07,8;UBERON:0010011,1.64e-07,8;UBERON:0000454,1.64e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0,5.42736870367227,2.87129103237098,1.10241719293459,1.24599112323707,1.83843757322004,3.30347642998166,1.40456071893706,2.4577045320999,1.71452174049252,2.28719109006024,1.56274011167028,3.07101298901519,2.8138130501584,4.43114918552749,6.77645746589436,7.54569908235246,3.16879057903011,0.075726193333184,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,45.2748524147716,6.93941307064543,7.30717147949139,11.5307748628029,9.94769427647309,10.9357497636205,25.0076516746054,0.494389935468748,0,0,0,0,0,0,2.92780797011547,1.25668024088073,0,0,0,0,5.84183493678809,12.3525162761029,13.5706700281894,6.43149984711423,6.64860189058859,4.57133698031032,6.32740925964255,2.54598409625791,6.46916247172484,30.8321765289083,0.210441855886474,0,0,0,0,0.680364991513279,1.5373646434182,1.78033276663485,3.62184719034622,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.205782136407943,6.36909653819178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.913988100877831,0,0.407302655690628,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,16.3873871375122,2.6968616189571,6.05423052468668,5.21238269931443,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.913394847343798,0,3.38931313382112,0,0,0,0,0,0,0,1.29797711407357,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.01908701894705,15.9982704267057,12.9057622556536,19.2506676460607,18.2115351103601,14.8681390431885,35.5592433096635,66.0136231158827,78.1202115971546,30.1980151032508,16.7057403629562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0,0,0,0,3.95326289831947,5.52390283808612,5.72895513439397,6.8741272937475,4.11049511862385,1.5107877947794,8.10027000278167,4.5032120322422,3.62513927187364,3.10656187051092,0,0,0,0,0.419226325255965,0.919217542250071,2.22246727801615,1.23621034343337,0.962757628775446,1.01078884705519,0.760437899670719,0.188626341386076,0.468207537349412,1.08842759088278,0.861532034334199,0.952587382566147,1.27472758539341,0.77163688185482,1.64834360321323,1.03039244094078,1.37147700954166,1.06485483695602,1.1921809497366,0.436039249896986,0.941093804153306,0.930760686808441,0.365855945745545,0.789209134313529,0.543216455383447,1.12228454331548,0.355905054372522,1.28055827088233,0,1.23949472948773,0.964533054905707,0.749431733813838,0.935726433781634,0.214871054048298,0.765153328275374,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.41621522601718,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,0.207379224616955,0,0,5.42736870367227,2.87129103237098,1.10241719293459,1.24599112323707,1.83843757322004,3.30347642998166,1.40456071893706,2.4577045320999,1.71452174049252,2.28719109006024,1.56274011167028,3.07101298901519,2.8138130501584,4.43114918552749,6.77645746589436,7.54569908235246,3.16879057903011,0.075726193333184,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,45.2748524147716,6.93941307064543,7.30717147949139,11.5307748628029,9.94769427647309,10.9357497636205,25.0076516746054,0.494389935468748,0,0,0,0,0,0,2.92780797011547,1.25668024088073,0,0,0,0,5.84183493678809,12.3525162761029,13.5706700281894,6.43149984711423,6.64860189058859,4.57133698031032,6.32740925964255,2.54598409625791,6.46916247172484,30.8321765289083,0.210441855886474,0,0,0,0,0.680364991513279,1.5373646434182,1.78033276663485,3.62184719034622,0,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0.205782136407943,6.36909653819178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,1.64647379806855,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.913988100877831,0,0.407302655690628,0.387904974335251,0.280543279561274,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.46144541843627,0,0,0,0,0,0,0,0,0,0,0,16.3873871375122,2.6968616189571,6.05423052468668,5.21238269931443,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.913394847343798,0,3.38931313382112,0,0,0,0,0,0,0,1.29797711407357,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.01908701894705,15.9982704267057,12.9057622556536,19.2506676460607,18.2115351103601,14.8681390431885,35.5592433096635,66.0136231158827,78.1202115971546,30.1980151032508,16.7057403629562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0,0,0,0,0,3.95326289831947,5.52390283808612,5.72895513439397,6.8741272937475,4.11049511862385,1.5107877947794,8.10027000278167,4.5032120322422,3.62513927187364,3.10656187051092,0,0,0,0,0.419226325255965,0.919217542250071,2.22246727801615,1.23621034343337,0.962757628775446,1.01078884705519,0.760437899670719,0.188626341386076,0.468207537349412,1.08842759088278,0.861532034334199,0.952587382566147,1.27472758539341,0.77163688185482,1.64834360321323,1.03039244094078,1.37147700954166,1.06485483695602,1.1921809497366,0.436039249896986,0.941093804153306,0.930760686808441,0.365855945745545,0.789209134313529,0.543216455383447,1.12228454331548,0.355905054372522,1.28055827088233,0,1.23949472948773,0.964533054905707,0.749431733813838,0.935726433781634,0.214871054048298,0.765153328275374,0,0
|short_description=p1@Trank1
}}
}}

Latest revision as of 06:15, 26 September 2015

Short description:p1@Trank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trank1_5end
Coexpression cluster:NA
Association with transcript: -187bp_to_ENSMUST00000078626, NM_001164659, uc009rvt.2, uc012hbq.1_5end
EntrezGene:Trank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D745.27
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I325.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F113.57
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B230.83
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I916.39
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I45.21
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F516.00
testis, embryo E15.CNhs11034.443-27C512.91
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I518.21
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B735.56
testis, neonate N07.CNhs11222.726-26I466.01
testis, neonate N10.CNhs11204.763-44D978.12
testis, neonate N20.CNhs11110.839-18H330.20
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.08e-1223
neuroblast (sensu Vertebrata)3.08e-1223
neuron6.45e-0733
neuronal stem cell6.45e-0733
neuroblast6.45e-0733
electrically signaling cell6.45e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.31e-1954
gray matter2.80e-1934
neural tube3.47e-1852
neural rod3.47e-1852
future spinal cord3.47e-1852
neural keel3.47e-1852
gonad7.27e-1818
gonad primordium7.27e-1818
external genitalia6.45e-1717
indifferent external genitalia6.45e-1717
indifferent gonad6.45e-1717
central nervous system2.65e-1673
male reproductive organ1.05e-1515
neurectoderm1.24e-1564
neural plate1.24e-1564
presumptive neural plate1.24e-1564
nervous system1.60e-1575
reproductive organ1.98e-1524
brain grey matter4.80e-1529
regional part of telencephalon4.80e-1529
telencephalon4.80e-1529
brain1.04e-1447
future brain1.04e-1447
testis1.76e-1414
male organism2.07e-1416
male reproductive system2.07e-1416
regional part of brain8.65e-1446
structure with developmental contribution from neural crest8.99e-1492
reproductive structure9.91e-1426
reproductive system9.91e-1426
anterior neural tube1.86e-1240
ecto-epithelium2.86e-1273
ectoderm-derived structure8.16e-1295
ectoderm8.16e-1295
presumptive ectoderm8.16e-1295
regional part of forebrain1.06e-1139
forebrain1.06e-1139
future forebrain1.06e-1139
pre-chordal neural plate1.89e-1149
regional part of cerebral cortex1.40e-1017
occipital lobe1.34e-0910
visual cortex1.34e-0910
neocortex1.34e-0910
cerebral cortex3.46e-0921
cerebral hemisphere3.46e-0921
pallium3.46e-0921
adrenal gland3.96e-097
adrenal/interrenal gland3.96e-097
intermediate mesoderm1.27e-0714
basal ganglion1.64e-078
nuclear complex of neuraxis1.64e-078
aggregate regional part of brain1.64e-078
collection of basal ganglia1.64e-078
cerebral subcortex1.64e-078
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