FFCP PHASE1:Mm9::chr8:90484484..90484518,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:90484484..90484518,-
|short_description=p@chr8:90484484..90484518,-
|description=CAGE_peak_at_chr8:90484484..90484518,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1187 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:90484484..90484518,- | |||
|description=CAGE_peak_at_chr8:90484484..90484518,- | |||
|id=chr8:90484484..90484518,- | |||
|ontology_enrichment_celltype=CL:0000117!1.94e-12!23;CL:0000337!1.94e-12!23;CL:0000540!1.11e-07!33;CL:0000047!1.11e-07!33;CL:0000031!1.11e-07!33;CL:0000404!1.11e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.53e-16,23;CL:0000337,8.53e-16,23;CL:0000540,2.13e-09,33;CL:0000047,2.13e-09,33;CL:0000031,2.13e-09,33;CL:0000404,2.13e-09,33;CL:0002319,1.94e-08,43;CL:0000221,4.79e-08,44;CL:0000133,4.79e-08,44;CL:0000393,9.03e-07,39;CL:0000211,9.03e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.39e-12!71;UBERON:0003075!1.39e-12!71;UBERON:0007284!1.39e-12!71;UBERON:0004121!3.47e-11!102;UBERON:0000924!3.47e-11!102;UBERON:0006601!3.47e-11!102;UBERON:0000468!1.42e-10!333;UBERON:0001017!1.26e-09!73;UBERON:0005743!1.26e-09!73;UBERON:0000033!1.36e-09!63;UBERON:0001049!3.11e-09!52;UBERON:0005068!3.11e-09!52;UBERON:0006241!3.11e-09!52;UBERON:0007135!3.11e-09!52;UBERON:0000073!1.11e-08!75;UBERON:0001016!1.11e-08!75;UBERON:0000922!9.63e-08!328;UBERON:0003056!2.16e-07!49;UBERON:0000955!2.58e-07!50;UBERON:0006238!2.58e-07!50;UBERON:0002616!3.31e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.51e-12,64;UBERON:0003075,8.51e-12,64;UBERON:0007284,8.51e-12,64;UBERON:0000073,7.20e-11,54;UBERON:0001017,1.62e-10,73;UBERON:0001049,3.06e-10,52;UBERON:0005068,3.06e-10,52;UBERON:0006241,3.06e-10,52;UBERON:0007135,3.06e-10,52;UBERON:0001016,7.21e-10,75;UBERON:0010371,2.32e-09,73;UBERON:0004121,2.73e-09,95;UBERON:0000924,2.73e-09,95;UBERON:0006601,2.73e-09,95;UBERON:0003076,7.74e-09,12;UBERON:0003057,7.74e-09,12;UBERON:0010314,3.73e-08,92;UBERON:0003056,5.39e-07,49;UBERON:0002240,6.54e-07,6;UBERON:0005174,6.54e-07,6;UBERON:0001137,6.54e-07,6 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,1.09012578190223,1.5378032791413,0.777719596297134,0.419959264876088,0,0,0,0,0,0.573066879877513,0.515672092277442,4.65327859977075,6.34789175126439,3.80298842103708,0,0,0.449949858640699,0,0,2.39680088414724,1.92109152660777,1.8664130215526,2.16009501330705,1.47227472945967,3.71346279724945,3.75476519617743,1.22490799214954,1.53352753629178,0.919218786610021,1.10115880999389,1.78762273319263,1.99688493233117,7.38563211289086,7.41049913179518,7.8137005583514,2.23346399201105,1.12552522006336,1.98637722109853,4.41942878210502,2.98980529678116,3.72798891650601,0,0,2.89864488701678,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0.517875767294343,1.48442139064825,0.346970653532272,1.52232739156071,0.922461989024234,1.20578112442098,1.29347577849275,0.376999773989026,0,2.16899035379867,0.884610551949874,1.13236794963186,0.220841518460394,0.969750506270444,0,3.80615036115011,2.93225389538837,0.255457055208591,0,0,0,1.64769703345305,0.915001205637253,0.628271760564322,0.521472960576829,0.511430914660661,2.49345653471472,0.973447578406546,0.712875546952214,0.746441823660558,0.252722758433675,0.420883711772948,0.910843100738926,1.60931473103431,2.16074555766419,2.10986744970001,2.04109497453984,1.40925092313335,1.59292931751539,2.06962696591213,1.5089759505299,4.34943984385984,1.93546236580344,0.876782929710299,1.39023624612799,1.0447564995665,0.61734640922383,1.39323986772945,0,0,0,0.414251545071004,0.469052119962192,1.2604344302271,1.18372367792605,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.817357396570186,0.329119699826961,0.656669856316381,0.891756905004413,0.292399974850665,0.878200461164203,1.34206418760372,0.420579897128254,1.64647379806855,0,0.264450566663544,1.91959425481711,1.62565670302307,1.15980715189884,0.403367049246685,0.22237804384487,0,0.474529061544512,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0,0,0.758671603812327,1.5994791765362,0,1.83286195060783,1.35766741017338,1.54298803758701,1.26473074248515,0.885660887877613,0.31399745568275,0.370191491765402,0,0.500535317148282,0,0,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,1.43768206527355,0.744281895337007,0.624075346229121,0,0.896987067609561,0,0,1.70542270593436,0.977789858652155,0.848725428875941,0.469380496577004,1.00503754465089,0.952174563544055,0.780534591431195,0.788175720530955,0.8858587585951,0.478364305972461,1.3109065177259,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.827810238914197,2.40825884981688,1.75817529888305,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0,0,0.963963949265421,0.709700426041343,0.712262414669021,0.488660878060728,0.659880491890142,0,1.45668381692989,0.604647113929502,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,2.34079422240703,2.32845630808958,1.92903331528433,1.95074257006501,1.24858172321449,0.987294123612726,0.304464949114599,0,0.21183207086382,0,0.65954501176592,0.807322133479528,0.72375509913787,0.238744688006273,0.656563598980245,0,2.41052892613663,0,2.27025554759545,1.48155621895769,0,0,0.457556346413045,0,0,0,0,1.10717597753397,2.43983360552218,0.648032044930808,0.627264888043406,1.09181281873089,0.134864346384821,0.495920734352016,0.26175594198403,0.259229946583586,0,0,2.0932316446157,1.15820943319968,2.13896307178452,1.80823752868824,1.35164900392623,2.22978753426933,1.43224823328345,0.838874755405687,0.483168241652012,0.288030006257865,0.316011120628178,0.810900861160657,0.308132871494482,0.649604114888975,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0.350630706544707,0.680191150845634,0,0,0,1.15913756419314,0.187682475451182,0.549454872801795,0.214368379079066,1.00314420807073,0,0.460325236507177,1.71868654031819,0.171853182343688,0,0,0,0,0.453142408984205,0,2.07574695168353,5.98537310101547,2.04880326904961,1.94485373654635,1.46729213839588,1.10306105070008,0.666740183404846,1.64828045791115,0.64183841918363,1.51618327058278,1.01391719956096,1.32038438970253,1.49826411951812,1.47257850531199,1.14870937911227,1.42888107384922,1.15884325944855,0.38581844092741,2.06042950401653,1.03039244094078,0.342869252385415,1.95223386775271,1.66905332963125,1.16277133305863,1.31753132581463,1.35383372626682,1.46342378298218,1.05227884575137,0.679020569229309,0.561142271657738,1.30498519936592,0.886540341380071,1.22769312950907,0.77468420592983,1.73615949883027,2.24829520144151,0.701794825336225,1.50409737833809,1.14772999241306,1.10295709559758,1.39120701372253 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| ||
|short_description=p@chr8:90484484..90484518,- | |||
}} | }} |
Latest revision as of 07:30, 4 August 2015
Short description: | p@chr8:90484484..90484518, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:90484484..90484518, - |
Coexpression cluster: | MCL_coexpression_mm9:1187 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.53e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.53e-16 | 23 |
neuron | 2.13e-09 | 33 |
neuronal stem cell | 2.13e-09 | 33 |
neuroblast | 2.13e-09 | 33 |
electrically signaling cell | 2.13e-09 | 33 |
neural cell | 1.94e-08 | 43 |
ectodermal cell | 4.79e-08 | 44 |
neurectodermal cell | 4.79e-08 | 44 |
electrically responsive cell | 9.03e-07 | 39 |
electrically active cell | 9.03e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.51e-12 | 64 |
neural plate | 8.51e-12 | 64 |
presumptive neural plate | 8.51e-12 | 64 |
regional part of nervous system | 7.20e-11 | 54 |
central nervous system | 1.62e-10 | 73 |
neural tube | 3.06e-10 | 52 |
neural rod | 3.06e-10 | 52 |
future spinal cord | 3.06e-10 | 52 |
neural keel | 3.06e-10 | 52 |
nervous system | 7.21e-10 | 75 |
ecto-epithelium | 2.32e-09 | 73 |
ectoderm-derived structure | 2.73e-09 | 95 |
ectoderm | 2.73e-09 | 95 |
presumptive ectoderm | 2.73e-09 | 95 |
posterior neural tube | 7.74e-09 | 12 |
chordal neural plate | 7.74e-09 | 12 |
structure with developmental contribution from neural crest | 3.73e-08 | 92 |
pre-chordal neural plate | 5.39e-07 | 49 |
spinal cord | 6.54e-07 | 6 |
dorsal region element | 6.54e-07 | 6 |
dorsum | 6.54e-07 | 6 |