FFCP PHASE1:Mm9::chr8:87823595..87823605,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:87823595..87823605,+
|short_description=p5@Orc6
|description=CAGE_peak_5_at_Orc6_5end
|association_with_transcript=64bp_to_ENSMUST00000034132,ENSMUST000001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56452 | |EntrezGene=56452 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q66JV6,Q3TQX1 | |UniProt=Q66JV6,Q3TQX1 | ||
|association_with_transcript=64bp_to_ENSMUST00000034132,ENSMUST00000170141,NM_001163791,NM_019716,NR_028268,uc009mpp.2,uc009mpq.2,uc009mpr.2_5end | |||
|cluster_id=chr8:87823595..87823605,+ | |||
|description=CAGE_peak_5_at_Orc6_5end | |||
|id=chr8:87823595..87823605,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.77e-07,19;CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1 | |||
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| ||
|short_description=p5@Orc6 | |||
}} | }} |
Latest revision as of 22:33, 25 September 2015
Short description: | p5@Orc6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Orc6_5end |
Coexpression cluster: | NA |
Association with transcript: | 64bp_to_ENSMUST00000034132, ENSMUST00000170141, NM_001163791, NM_019716, NR_028268, uc009mpp.2, uc009mpq.2, uc009mpr.2_5end |
EntrezGene: | Orc6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.77e-07 | 19 |
lining cell | 2.75e-07 | 1 |
meso-epithelial cell | 2.75e-07 | 1 |
endothelial cell | 2.75e-07 | 1 |
endothelial cell of sinusoid | 2.75e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.75e-07 | 1 |
hepatic sinusoid | 2.75e-07 | 1 |
parenchyma | 2.75e-07 | 1 |
abdomen blood vessel | 2.75e-07 | 1 |
sinusoid | 2.75e-07 | 1 |
digestive system duct | 2.75e-07 | 1 |
abdominal segment blood vessel | 2.75e-07 | 1 |
trunk blood vessel | 2.75e-07 | 1 |
liver parenchyma | 2.75e-07 | 1 |
liver lobule | 2.75e-07 | 1 |
biliary system | 2.75e-07 | 1 |
biliary tree | 2.75e-07 | 1 |
biliary bud | 2.75e-07 | 1 |
hepatic duct | 2.75e-07 | 1 |