FFCP PHASE1:Mm9::chr8:85856266..85856269,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:85856266..85856269,-
|short_description=p3@Elmod2
|description=CAGE_peak_3_at_Elmod2_5end
|association_with_transcript=33bp_to_ENSMUST00000126079,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=244548 | |EntrezGene=244548 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=260 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENSMUST00000126079,ENSMUST00000141565_5end | |||
|cluster_id=chr8:85856266..85856269,- | |||
|description=CAGE_peak_3_at_Elmod2_5end | |||
|id=chr8:85856266..85856269,- | |||
|ontology_enrichment_celltype=CL:0000723!8.43e-08!91;CL:0000048!8.43e-08!91;CL:0000838!3.41e-07!12;CL:0000034!5.41e-07!97;CL:0000791!7.10e-07!9;CL:0000789!7.10e-07!9;CL:0002420!7.10e-07!9;CL:0002419!7.10e-07!9;CL:0000790!7.10e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.09e-13,9;CL:0000893,2.37e-09,6;CL:0002489,2.37e-09,6;CL:0000898,2.37e-09,6;CL:0000809,2.37e-09,6;CL:0000810,2.37e-09,6;CL:0000895,2.37e-09,6;CL:0000808,2.37e-09,6;CL:0000894,2.37e-09,6;CL:0000806,2.37e-09,6;CL:0000807,2.37e-09,6;CL:0000805,2.37e-09,6;CL:0002425,2.37e-09,6;CL:0002436,2.37e-09,6;CL:0002427,2.37e-09,6;CL:0002428,2.37e-09,6;CL:0002429,2.37e-09,6;CL:0002433,2.37e-09,6;CL:0002431,2.37e-09,6;CL:0002432,2.37e-09,6;CL:0000624,3.05e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.18e-37,3;DOID:4045,1.18e-37,3;DOID:0050686,2.81e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!5.79e-08!23;UBERON:0000974!5.79e-08!23;UBERON:0004807!5.79e-08!23;UBERON:0005058!5.79e-08!23;UBERON:0003351!5.79e-08!23;UBERON:0009113!5.79e-08!23;UBERON:0003295!5.79e-08!23;UBERON:0009722!5.79e-08!23;UBERON:0005562!5.79e-08!23;UBERON:0007690!5.79e-08!23;UBERON:0002193!9.82e-08!48;UBERON:0006562!2.08e-07!24;UBERON:0003408!2.08e-07!24;UBERON:0001557!2.08e-07!24;UBERON:0001042!2.08e-07!24;UBERON:0008814!2.08e-07!24;UBERON:0009145!2.08e-07!24;UBERON:0000064!4.93e-07!99;UBERON:0004177!5.53e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.09e-13,9;UBERON:0002036,4.09e-13,9;UBERON:0002385,4.09e-13,9;UBERON:0000486,4.09e-13,9;UBERON:0007503,4.09e-13,9;UBERON:0001015,4.09e-13,9;UBERON:0002329,4.09e-13,9;UBERON:0003082,4.09e-13,9;UBERON:0003059,4.09e-13,9;UBERON:0007282,4.09e-13,9;UBERON:0004290,4.09e-13,9;UBERON:0009618,4.09e-13,9;UBERON:0000383,7.07e-12,10;UBERON:0007524,7.32e-11,11;UBERON:0003077,7.32e-11,11;UBERON:0007285,7.32e-11,11 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.774739940649458,2.53419699873,1.17032263160997,0,0.239316476986009,0.513602189793617,0.611942816932982,0.333109761815663,0,0,0.946386496074713,0.411343300817216,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,3.41522742479223,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.630974884054146,0.285650984403804,0,0.367472397644862,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.45839474333043,0,0.284743361598206,0,0,0,0.289864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.879580464790051,0,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.514523061896422,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0,0.341741761595705,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0.724752362478018,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.701261413089414,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.726732083161643,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.774739940649458,2.53419699873,1.17032263160997,0,0.239316476986009,0.513602189793617,0.611942816932982,0.333109761815663,0,0,0.946386496074713,0.411343300817216,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.09265815368454,1.5626706890476,1.0470474879476,0.588231488031014,3.41522742479223,0.485510353031154,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.336093799142464,0,0,0,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.630974884054146,0.285650984403804,0,0.367472397644862,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0.45839474333043,0,0.284743361598206,0,0,0,0.289864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0.879580464790051,0,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0.514523061896422,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0.164140899745061,0,0,0.341741761595705,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0.724752362478018,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,0.295379054349154,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0.0962118416403295,0.701261413089414,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.343706364687375,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0.726732083161643,0,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p3@Elmod2 | |||
}} | }} |
Latest revision as of 20:31, 25 September 2015
Short description: | p3@Elmod2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Elmod2_5end |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | 33bp_to_ENSMUST00000126079, ENSMUST00000141565_5end |
EntrezGene: | Elmod2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.09e-13 | 9 |
thymocyte | 2.37e-09 | 6 |
double negative thymocyte | 2.37e-09 | 6 |
naive T cell | 2.37e-09 | 6 |
double-positive, alpha-beta thymocyte | 2.37e-09 | 6 |
CD4-positive, alpha-beta thymocyte | 2.37e-09 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.37e-09 | 6 |
DN4 thymocyte | 2.37e-09 | 6 |
DN1 thymic pro-T cell | 2.37e-09 | 6 |
DN2 thymocyte | 2.37e-09 | 6 |
DN3 thymocyte | 2.37e-09 | 6 |
immature single positive thymocyte | 2.37e-09 | 6 |
early T lineage precursor | 2.37e-09 | 6 |
mature CD4 single-positive thymocyte | 2.37e-09 | 6 |
resting double-positive thymocyte | 2.37e-09 | 6 |
double-positive blast | 2.37e-09 | 6 |
CD69-positive double-positive thymocyte | 2.37e-09 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 2.37e-09 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.37e-09 | 6 |
CD24-positive, CD4 single-positive thymocyte | 2.37e-09 | 6 |
CD4-positive, alpha-beta T cell | 3.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.09e-13 | 9 |
striated muscle tissue | 4.09e-13 | 9 |
muscle tissue | 4.09e-13 | 9 |
multilaminar epithelium | 4.09e-13 | 9 |
epithelial vesicle | 4.09e-13 | 9 |
musculature | 4.09e-13 | 9 |
somite | 4.09e-13 | 9 |
myotome | 4.09e-13 | 9 |
presomitic mesoderm | 4.09e-13 | 9 |
presumptive segmental plate | 4.09e-13 | 9 |
dermomyotome | 4.09e-13 | 9 |
trunk paraxial mesoderm | 4.09e-13 | 9 |
musculature of body | 7.07e-12 | 10 |
dense mesenchyme tissue | 7.32e-11 | 11 |
paraxial mesoderm | 7.32e-11 | 11 |
presumptive paraxial mesoderm | 7.32e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.18e-37 | 3 |
muscle cancer | 1.18e-37 | 3 |
organ system cancer | 2.81e-19 | 6 |