Personal tools

FFCP PHASE1:Mm9::chr8:70342183..70342219,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr8:70342183..70342219,- |short_description=p3@Psd3 |description=CAGE_peak_3_at_Psd3_5end |association_with_transcript=0bp_to_ENSMUST00000120071,NM_027626,uc00...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:70342183..70342219,-
|DHSsupport=NA
|short_description=p3@Psd3
|DPIdataset=NA
|description=CAGE_peak_3_at_Psd3_5end
|association_with_transcript=0bp_to_ENSMUST00000120071,NM_027626,uc009lwb.2,uc012gel.1_5end
|EntrezGene=234353
|EntrezGene=234353
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9PUC5,Q2PFD7,Q78V97,Q8C0E9
|UniProt=E9PUC5,Q2PFD7,Q78V97,Q8C0E9
|association_with_transcript=0bp_to_ENSMUST00000120071,NM_027626,uc009lwb.2,uc012gel.1_5end
|cluster_id=chr8:70342183..70342219,-
|description=CAGE_peak_3_at_Psd3_5end
|id=chr8:70342183..70342219,-
|ontology_enrichment_celltype=CL:0000117!8.44e-10!23;CL:0000337!8.44e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.39e-12,23;CL:0000337,3.39e-12,23;CL:0000393,8.49e-08,39;CL:0000211,8.49e-08,39;CL:0000540,1.84e-07,33;CL:0000047,1.84e-07,33;CL:0000031,1.84e-07,33;CL:0000404,1.84e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.99e-19!52;UBERON:0005068!1.99e-19!52;UBERON:0006241!1.99e-19!52;UBERON:0007135!1.99e-19!52;UBERON:0000033!2.50e-19!63;UBERON:0000955!2.50e-18!50;UBERON:0006238!2.50e-18!50;UBERON:0002346!1.04e-17!71;UBERON:0003075!1.04e-17!71;UBERON:0007284!1.04e-17!71;UBERON:0002616!1.19e-17!49;UBERON:0001017!1.30e-17!73;UBERON:0005743!1.30e-17!73;UBERON:0000073!9.41e-17!75;UBERON:0001016!9.41e-17!75;UBERON:0002020!2.48e-16!34;UBERON:0003056!1.92e-15!49;UBERON:0003080!2.35e-14!40;UBERON:0002780!9.26e-14!39;UBERON:0001890!9.26e-14!39;UBERON:0006240!9.26e-14!39;UBERON:0002791!2.18e-13!29;UBERON:0003528!2.18e-13!29;UBERON:0001893!2.18e-13!29;UBERON:0004121!4.52e-13!102;UBERON:0000924!4.52e-13!102;UBERON:0006601!4.52e-13!102;UBERON:0000153!7.65e-12!94;UBERON:0007811!7.80e-12!86;UBERON:0000956!5.58e-09!21;UBERON:0001869!5.58e-09!21;UBERON:0000203!5.58e-09!21;UBERON:0002021!1.43e-08!10;UBERON:0000411!1.43e-08!10;UBERON:0001950!1.43e-08!10;UBERON:0002619!1.56e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.22e-26,54;UBERON:0001049,4.33e-24,52;UBERON:0005068,4.33e-24,52;UBERON:0006241,4.33e-24,52;UBERON:0007135,4.33e-24,52;UBERON:0001017,2.16e-23,73;UBERON:0001016,2.61e-22,75;UBERON:0002020,1.50e-20,34;UBERON:0000955,7.57e-20,47;UBERON:0006238,7.57e-20,47;UBERON:0002346,7.96e-20,64;UBERON:0003075,7.96e-20,64;UBERON:0007284,7.96e-20,64;UBERON:0002616,6.64e-19,46;UBERON:0003080,1.08e-16,40;UBERON:0010371,1.94e-16,73;UBERON:0004121,2.04e-16,95;UBERON:0000924,2.04e-16,95;UBERON:0006601,2.04e-16,95;UBERON:0003528,3.26e-16,29;UBERON:0002791,3.26e-16,29;UBERON:0001893,3.26e-16,29;UBERON:0002780,7.56e-16,39;UBERON:0001890,7.56e-16,39;UBERON:0006240,7.56e-16,39;UBERON:0003056,1.83e-14,49;UBERON:0002021,3.02e-12,10;UBERON:0000411,3.02e-12,10;UBERON:0001950,3.02e-12,10;UBERON:0002619,2.45e-11,17;UBERON:0010314,3.83e-10,92;UBERON:0000956,7.97e-10,21;UBERON:0001869,7.97e-10,21;UBERON:0000203,7.97e-10,21;UBERON:0003076,4.11e-08,12;UBERON:0003057,4.11e-08,12;UBERON:0002420,4.61e-08,8;UBERON:0007245,4.61e-08,8;UBERON:0010009,4.61e-08,8;UBERON:0010011,4.61e-08,8;UBERON:0000454,4.61e-08,8
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,3.85232338634155,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,1.81982348112971,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,3.1691570175309,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,10.8547374073445,10.6016899656774,2.20483438586917,1.15014565221884,0,7.70811166995721,37.9231394113008,28.5708151856613,3.82470234417562,3.47653045689157,4.16730696445408,10.8881369610539,19.6966913511088,32.3932285286837,22.6864010814724,31.1793980950035,8.20157561631323,0,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,53.5788858531131,89.2242971025319,0.255457055208591,0,0,0,21.12048015608,43.9200578705881,8.54449594367478,89.1718762586378,92.3132800962493,42.3887610901503,41.0470395561427,0.712875546952214,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.720248519221397,0.60281927134286,1.36072998302656,1.5373646434182,0.655912071918102,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.116765342367169,0.658239399653922,0,0.0810688095458557,0,0,0,103.672944642115,14.4066457330998,0,0.528901133327089,0.853153002140936,1.16118335930219,0.257734922644187,0.605050573870028,0.444756087689741,0.380451252225118,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0,0,16.8578119487182,14.7686725106176,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0,0,0,0,0,63.300299335096,0.425820255624806,0.534196811001766,1.30309567482861,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.214337035031592,1.24138163549592,1.96205699362278,2.79733335023606,0.608929898229199,0.23467170806371,0,0.441056796109924,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.582961673259701,17.0591277849669,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.216010681643603,1.25452977608681,0,0.809186078308924,0.909188012978695,0,0.129614973291793,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,84.71277639256,109.097081052201,94.5277597175004,73.8968684077857,88.3756450504129,81.5825409180877,79.6526550273531,97.7197010996558,96.0661907046514,83.359410192043,0,1.59609949360412,0.853668028770671,0.972426868273176,2.30574478890781,1.83843508450014,2.22246727801615,1.03017528619447,2.88827288632634,2.02157769411038,1.01391719956096,3.58390048633545,1.96647165686753,1.72867911493147,2.01024141344646,3.81034953026459,1.97003354106254,3.47236596834669,1.64834360321323,1.61918812147837,1.02860775715625,2.12970967391205,3.09967046931517,2.0348498328526,2.54095327121393,1.52306294205018,2.0122077016005,2.63069711437843,1.90125759384206,1.12228454331548,2.60997039873183,2.46261205938909,3.27384834535751,1.39443157067369,0.771626443924566,2.24829520144151,1.87145286756327,2.79332370262788,2.48674831689496,0.661774257358546,0.231867835620421
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91715044485213,3.85232338634155,1.28482726513177,0,0.218025156380447,0.219686182734472,0.388859798148567,1.81982348112971,0,0,0,0,0,0,0,4.65327859977075,3.70293685490423,3.1691570175309,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,0,0.518448061542388,0.405017814995072,0.420649922702764,10.8547374073445,10.6016899656774,2.20483438586917,1.15014565221884,0,7.70811166995721,37.9231394113008,28.5708151856613,3.82470234417562,3.47653045689157,4.16730696445408,10.8881369610539,19.6966913511088,32.3932285286837,22.6864010814724,31.1793980950035,8.20157561631323,0,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0,0,0,53.5788858531131,89.2242971025319,0.255457055208591,0,0,0,21.12048015608,43.9200578705881,8.54449594367478,89.1718762586378,92.3132800962493,42.3887610901503,41.0470395561427,0.712875546952214,0.124406970610093,0,0.841767423545896,0.130120442962704,0.459804208866946,0.720248519221397,0.60281927134286,1.36072998302656,1.5373646434182,0.655912071918102,1.81092359517311,0.215567992932842,0.378212160335639,0.175951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,0.398068533636986,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0,0,0.116765342367169,0.658239399653922,0,0.0810688095458557,0,0,0,103.672944642115,14.4066457330998,0,0.528901133327089,0.853153002140936,1.16118335930219,0.257734922644187,0.605050573870028,0.444756087689741,0.380451252225118,0,1.15289268306808,0.754005626400808,0.994782360205754,0.58489226135736,0,0.216138049874694,0,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0,0,0,16.8578119487182,14.7686725106176,0,0,0.94652465824877,0.390438744296638,0.430846795465598,0,0,0,0,0,0,63.300299335096,0.425820255624806,0.534196811001766,1.30309567482861,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0,0.214337035031592,1.24138163549592,1.96205699362278,2.79733335023606,0.608929898229199,0.23467170806371,0,0.441056796109924,0.16488625294148,0.161464426695906,0.180938774784468,0,0,0.582961673259701,17.0591277849669,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,1.10717597753397,0.203319467126849,0.216010681643603,1.25452977608681,0,0.809186078308924,0.909188012978695,0,0.129614973291793,0.621339313086926,0,0.897099276263873,0.66183396182839,0,0.129159823477731,0.168956125490778,0.704143431874524,0.651021924219751,0.209718688851422,0,0,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0.772758376128762,0.187682475451182,0.183151624267265,0,0,84.71277639256,109.097081052201,94.5277597175004,73.8968684077857,88.3756450504129,81.5825409180877,79.6526550273531,97.7197010996558,96.0661907046514,83.359410192043,0,1.59609949360412,0.853668028770671,0.972426868273176,2.30574478890781,1.83843508450014,2.22246727801615,1.03017528619447,2.88827288632634,2.02157769411038,1.01391719956096,3.58390048633545,1.96647165686753,1.72867911493147,2.01024141344646,3.81034953026459,1.97003354106254,3.47236596834669,1.64834360321323,1.61918812147837,1.02860775715625,2.12970967391205,3.09967046931517,2.0348498328526,2.54095327121393,1.52306294205018,2.0122077016005,2.63069711437843,1.90125759384206,1.12228454331548,2.60997039873183,2.46261205938909,3.27384834535751,1.39443157067369,0.771626443924566,2.24829520144151,1.87145286756327,2.79332370262788,2.48674831689496,0.661774257358546,0.231867835620421
|short_description=p3@Psd3
}}
}}

Latest revision as of 16:31, 25 September 2015

Short description:p3@Psd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Psd3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000120071, NM_027626, uc009lwb.2, uc012gel.1_5end
EntrezGene:Psd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Psd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.69
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F631.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B253.58
cerebellum, neonate N30.CNhs11135.1395-42I289.22
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.12
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D589.17
cortex, neonate N30.CNhs11107.1392-42F292.31
diencephalon, adult.CNhs10482.20-12F242.39
diencephalon, neonate N30.CNhs11201.1388-42B241.05
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8103.67
hippocampus, neonate N00.CNhs11228.627-43G114.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I963.30
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A184.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2109.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A394.53
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D773.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A488.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A581.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A679.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A797.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A896.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A983.36
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.39e-1223
neuroblast (sensu Vertebrata)3.39e-1223
electrically responsive cell8.49e-0839
electrically active cell8.49e-0839
neuron1.84e-0733
neuronal stem cell1.84e-0733
neuroblast1.84e-0733
electrically signaling cell1.84e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.22e-2654
neural tube4.33e-2452
neural rod4.33e-2452
future spinal cord4.33e-2452
neural keel4.33e-2452
central nervous system2.16e-2373
nervous system2.61e-2275
gray matter1.50e-2034
brain7.57e-2047
future brain7.57e-2047
neurectoderm7.96e-2064
neural plate7.96e-2064
presumptive neural plate7.96e-2064
regional part of brain6.64e-1946
anterior neural tube1.08e-1640
ecto-epithelium1.94e-1673
ectoderm-derived structure2.04e-1695
ectoderm2.04e-1695
presumptive ectoderm2.04e-1695
brain grey matter3.26e-1629
regional part of telencephalon3.26e-1629
telencephalon3.26e-1629
regional part of forebrain7.56e-1639
forebrain7.56e-1639
future forebrain7.56e-1639
pre-chordal neural plate1.83e-1449
occipital lobe3.02e-1210
visual cortex3.02e-1210
neocortex3.02e-1210
regional part of cerebral cortex2.45e-1117
structure with developmental contribution from neural crest3.83e-1092
cerebral cortex7.97e-1021
cerebral hemisphere7.97e-1021
pallium7.97e-1021
posterior neural tube4.11e-0812
chordal neural plate4.11e-0812
basal ganglion4.61e-088
nuclear complex of neuraxis4.61e-088
aggregate regional part of brain4.61e-088
collection of basal ganglia4.61e-088
cerebral subcortex4.61e-088
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:70342183..70342219,-&oldid=4202110"