FFCP PHASE1:Mm9::chr8:13105715..13105764,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:13105715..13105764,+
|short_description=p1@Cul4a
|description=CAGE_peak_1_at_Cul4a_5end
|association_with_transcript=0bp_to_ENSMUST00000121426,ENSMUST00000...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=99375 | |EntrezGene=99375 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PXT5,Q3TCH7 | |UniProt=E9PXT5,Q3TCH7 | ||
|association_with_transcript=0bp_to_ENSMUST00000121426,ENSMUST00000135371,NM_146207,uc009kww.2_5end | |||
|cluster_id=chr8:13105715..13105764,+ | |||
|description=CAGE_peak_1_at_Cul4a_5end | |||
|id=chr8:13105715..13105764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.81e-14,47;UBERON:0005172,7.52e-14,49;UBERON:0005173,7.52e-14,49;UBERON:0002417,7.52e-14,49;UBERON:0000916,7.52e-14,49;UBERON:0009569,2.55e-12,66;UBERON:0002107,7.32e-12,22;UBERON:0007499,7.32e-12,22;UBERON:0006925,7.32e-12,22;UBERON:0009497,7.32e-12,22;UBERON:0000015,7.32e-12,22;UBERON:0002423,7.32e-12,22;UBERON:0006235,7.32e-12,22;UBERON:0008835,7.32e-12,22;UBERON:0003894,7.32e-12,22;UBERON:0004161,7.32e-12,22;UBERON:0008836,7.32e-12,22;UBERON:0005177,9.64e-12,79;UBERON:0009854,8.27e-11,23;UBERON:0009856,8.27e-11,23;UBERON:0002365,1.83e-10,25;UBERON:0002330,1.83e-10,25;UBERON:0003104,1.01e-09,61;UBERON:0009142,1.01e-09,61;UBERON:0002100,1.75e-09,90;UBERON:0005256,1.97e-08,45;UBERON:0001048,2.30e-07,134;UBERON:0004872,4.04e-07,33 | |||
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| ||
|short_description=p1@Cul4a | |||
}} | }} |
Latest revision as of 18:37, 1 October 2015
Short description: | p1@Cul4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cul4a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000121426, ENSMUST00000135371, NM_146207, uc009kww.2_5end |
EntrezGene: | Cul4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.81e-14 | 47 |
abdomen element | 7.52e-14 | 49 |
abdominal segment element | 7.52e-14 | 49 |
abdominal segment of trunk | 7.52e-14 | 49 |
abdomen | 7.52e-14 | 49 |
subdivision of trunk | 2.55e-12 | 66 |
liver | 7.32e-12 | 22 |
epithelial sac | 7.32e-12 | 22 |
digestive gland | 7.32e-12 | 22 |
epithelium of foregut-midgut junction | 7.32e-12 | 22 |
anatomical boundary | 7.32e-12 | 22 |
hepatobiliary system | 7.32e-12 | 22 |
foregut-midgut junction | 7.32e-12 | 22 |
hepatic diverticulum | 7.32e-12 | 22 |
liver primordium | 7.32e-12 | 22 |
septum transversum | 7.32e-12 | 22 |
liver bud | 7.32e-12 | 22 |
trunk region element | 9.64e-12 | 79 |
digestive tract diverticulum | 8.27e-11 | 23 |
sac | 8.27e-11 | 23 |
exocrine gland | 1.83e-10 | 25 |
exocrine system | 1.83e-10 | 25 |
mesenchyme | 1.01e-09 | 61 |
entire embryonic mesenchyme | 1.01e-09 | 61 |
trunk | 1.75e-09 | 90 |
trunk mesenchyme | 1.97e-08 | 45 |
primordium | 2.30e-07 | 134 |
splanchnic layer of lateral plate mesoderm | 4.04e-07 | 33 |