FFCP PHASE1:Mm9::chr7:3655909..3655936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:3655909..3655936,+
|short_description=p3@Rps9
|description=CAGE_peak_3_at_Rps9_5end
|association_with_transcript=0bp_to_ENSMUST00000108624,ENSMUST000001265...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76846 | |EntrezGene=76846 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z673,D3YWH9 | |UniProt=D3Z673,D3YWH9 | ||
|association_with_transcript=0bp_to_ENSMUST00000108624,ENSMUST00000126562_5end | |||
|cluster_id=chr7:3655909..3655936,+ | |||
|description=CAGE_peak_3_at_Rps9_5end | |||
|id=chr7:3655909..3655936,+ | |||
|ontology_enrichment_celltype=CL:0000034!2.21e-24!97;CL:0000144!1.74e-23!121;CL:0000012!1.74e-23!121;CL:0002371!8.71e-23!118;CL:0000723!1.43e-22!91;CL:0000048!1.43e-22!91;CL:0000548!7.76e-22!115;CL:0000004!7.76e-22!115;CL:0000255!7.76e-22!115;CL:0002319!5.82e-16!43;CL:0000221!6.40e-16!44;CL:0000133!6.40e-16!44;CL:0000055!8.72e-16!50;CL:0000540!1.24e-12!33;CL:0000047!1.24e-12!33;CL:0000031!1.24e-12!33;CL:0000404!1.24e-12!33;CL:0000393!2.40e-12!39;CL:0000211!2.40e-12!39;CL:0002321!7.49e-12!70;CL:0000220!7.49e-12!70;CL:0000219!2.02e-11!54;CL:0000117!9.29e-11!23;CL:0000337!9.29e-11!23;CL:0002320!3.40e-09!46;CL:0000134!3.40e-09!46;CL:0000988!6.23e-07!32;CL:0002032!6.23e-07!32;CL:0000037!6.23e-07!32;CL:0000566!6.23e-07!32;CL:0000837!6.23e-07!32;CL:0002031!7.19e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,8.23e-27,97;CL:0000723,1.01e-24,91;CL:0000048,1.01e-24,91;CL:0002319,2.24e-18,43;CL:0000221,2.51e-18,44;CL:0000133,2.51e-18,44;CL:0000540,1.73e-14,33;CL:0000047,1.73e-14,33;CL:0000031,1.73e-14,33;CL:0000404,1.73e-14,33;CL:0000393,3.74e-14,39;CL:0000211,3.74e-14,39;CL:0002321,3.75e-14,70;CL:0000219,1.37e-12,54;CL:0000117,2.68e-12,23;CL:0000337,2.68e-12,23;CL:0002320,5.08e-10,46;CL:0000134,5.08e-10,46;CL:0002031,7.56e-08,25;CL:0000988,1.77e-07,32;CL:0002032,1.77e-07,32;CL:0000037,1.77e-07,32;CL:0000837,1.77e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.83e-24!75;UBERON:0001016!1.83e-24!75;UBERON:0001017!9.99e-24!73;UBERON:0005743!9.99e-24!73;UBERON:0002020!7.77e-17!34;UBERON:0001049!6.26e-16!52;UBERON:0005068!6.26e-16!52;UBERON:0006241!6.26e-16!52;UBERON:0007135!6.26e-16!52;UBERON:0000955!1.73e-14!50;UBERON:0006238!1.73e-14!50;UBERON:0004121!2.92e-14!102;UBERON:0000924!2.92e-14!102;UBERON:0006601!2.92e-14!102;UBERON:0002616!3.93e-14!49;UBERON:0002791!9.53e-14!29;UBERON:0003528!9.53e-14!29;UBERON:0001893!9.53e-14!29;UBERON:0002346!1.85e-12!71;UBERON:0003075!1.85e-12!71;UBERON:0007284!1.85e-12!71;UBERON:0000033!5.64e-11!63;UBERON:0003080!7.88e-11!40;UBERON:0002780!1.96e-10!39;UBERON:0001890!1.96e-10!39;UBERON:0006240!1.96e-10!39;UBERON:0000956!5.93e-10!21;UBERON:0001869!5.93e-10!21;UBERON:0000203!5.93e-10!21;UBERON:0002384!3.40e-09!46;UBERON:0002619!1.52e-08!17;UBERON:0007811!6.48e-08!86;UBERON:0003056!7.05e-08!49;UBERON:0002021!8.56e-08!10;UBERON:0000411!8.56e-08!10;UBERON:0001950!8.56e-08!10;UBERON:0000153!7.46e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.64e-27,75;UBERON:0001017,1.18e-26,73;UBERON:0002020,2.13e-19,34;UBERON:0000073,5.94e-19,54;UBERON:0004121,1.20e-17,95;UBERON:0000924,1.20e-17,95;UBERON:0006601,1.20e-17,95;UBERON:0001049,1.33e-17,52;UBERON:0005068,1.33e-17,52;UBERON:0006241,1.33e-17,52;UBERON:0007135,1.33e-17,52;UBERON:0003528,8.66e-16,29;UBERON:0002791,8.66e-16,29;UBERON:0001893,8.66e-16,29;UBERON:0000955,2.48e-14,47;UBERON:0006238,2.48e-14,47;UBERON:0002346,5.31e-14,64;UBERON:0003075,5.31e-14,64;UBERON:0007284,5.31e-14,64;UBERON:0002616,6.25e-14,46;UBERON:0003080,1.01e-11,40;UBERON:0000956,2.33e-11,21;UBERON:0001869,2.33e-11,21;UBERON:0000203,2.33e-11,21;UBERON:0002780,2.89e-11,39;UBERON:0001890,2.89e-11,39;UBERON:0006240,2.89e-11,39;UBERON:0010371,8.39e-11,73;UBERON:0002384,5.08e-10,46;UBERON:0002619,1.03e-09,17;UBERON:0002021,7.68e-09,10;UBERON:0000411,7.68e-09,10;UBERON:0001950,7.68e-09,10;UBERON:0003056,5.87e-08,49;UBERON:0002371,4.19e-07,16;UBERON:0010314,4.62e-07,92;UBERON:0003076,5.49e-07,12;UBERON:0003057,5.49e-07,12 | |||
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| ||
|short_description=p3@Rps9 | |||
}} | }} |
Latest revision as of 17:01, 26 September 2015
Short description: | p3@Rps9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rps9_5end |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | 0bp_to_ENSMUST00000108624, ENSMUST00000126562_5end |
EntrezGene: | Rps9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 8.23e-27 | 97 |
somatic stem cell | 1.01e-24 | 91 |
multi fate stem cell | 1.01e-24 | 91 |
neural cell | 2.24e-18 | 43 |
ectodermal cell | 2.51e-18 | 44 |
neurectodermal cell | 2.51e-18 | 44 |
neuron | 1.73e-14 | 33 |
neuronal stem cell | 1.73e-14 | 33 |
neuroblast | 1.73e-14 | 33 |
electrically signaling cell | 1.73e-14 | 33 |
electrically responsive cell | 3.74e-14 | 39 |
electrically active cell | 3.74e-14 | 39 |
embryonic cell | 3.75e-14 | 70 |
motile cell | 1.37e-12 | 54 |
CNS neuron (sensu Vertebrata) | 2.68e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.68e-12 | 23 |
connective tissue cell | 5.08e-10 | 46 |
mesenchymal cell | 5.08e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 7.56e-08 | 25 |
hematopoietic cell | 1.77e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.77e-07 | 32 |
hematopoietic stem cell | 1.77e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.77e-07 | 32 |