FFCP PHASE1:Mm9::chr7:17509224..17509240,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:17509224..17509240,-
|short_description=p3@Calm2,p4@Calm1,p4@Calm3
|description=CAGE_peak_3_at_Calm2_5end,CAGE_peak_4_at_Calm1_5end,CAGE_peak_4_at_Calm3_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12313,12314,12315 | |EntrezGene=12313,12314,12315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENSMUST00000173557_5end | |||
|cluster_id=chr7:17509224..17509240,- | |||
|description=CAGE_peak_3_at_Calm2_5end,CAGE_peak_4_at_Calm1_5end,CAGE_peak_4_at_Calm3_5end | |||
|id=chr7:17509224..17509240,- | |||
|ontology_enrichment_celltype=CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0000221!2.75e-11!44;CL:0000133!2.75e-11!44;CL:0002319!6.73e-11!43;CL:0000540!6.88e-10!33;CL:0000047!6.88e-10!33;CL:0000031!6.88e-10!33;CL:0000404!6.88e-10!33;CL:0000055!9.90e-09!50;CL:0000393!3.81e-08!39;CL:0000211!3.81e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.47e-12,23;CL:0000337,1.47e-12,23;CL:0000221,2.72e-11,44;CL:0000133,2.72e-11,44;CL:0002319,6.68e-11,43;CL:0000540,6.83e-10,33;CL:0000047,6.83e-10,33;CL:0000031,6.83e-10,33;CL:0000404,6.83e-10,33;CL:0000393,3.79e-08,39;CL:0000211,3.79e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.99e-27!73;UBERON:0005743!1.99e-27!73;UBERON:0000073!9.40e-26!75;UBERON:0001016!9.40e-26!75;UBERON:0001049!1.06e-24!52;UBERON:0005068!1.06e-24!52;UBERON:0006241!1.06e-24!52;UBERON:0007135!1.06e-24!52;UBERON:0000033!6.57e-24!63;UBERON:0002346!8.63e-24!71;UBERON:0003075!8.63e-24!71;UBERON:0007284!8.63e-24!71;UBERON:0000955!2.70e-23!50;UBERON:0006238!2.70e-23!50;UBERON:0002616!8.84e-23!49;UBERON:0003056!1.82e-20!49;UBERON:0002020!1.31e-19!34;UBERON:0004121!7.88e-19!102;UBERON:0000924!7.88e-19!102;UBERON:0006601!7.88e-19!102;UBERON:0003080!2.38e-18!40;UBERON:0002780!8.76e-18!39;UBERON:0001890!8.76e-18!39;UBERON:0006240!8.76e-18!39;UBERON:0002791!8.16e-17!29;UBERON:0003528!8.16e-17!29;UBERON:0001893!8.16e-17!29;UBERON:0007811!3.01e-16!86;UBERON:0000153!1.86e-14!94;UBERON:0000956!2.37e-12!21;UBERON:0001869!2.37e-12!21;UBERON:0000203!2.37e-12!21;UBERON:0002619!1.38e-10!17;UBERON:0002021!1.05e-07!10;UBERON:0000411!1.05e-07!10;UBERON:0001950!1.05e-07!10;UBERON:0003076!6.19e-07!12;UBERON:0003057!6.19e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-27,73;UBERON:0002346,2.38e-26,64;UBERON:0003075,2.38e-26,64;UBERON:0007284,2.38e-26,64;UBERON:0000073,8.48e-26,54;UBERON:0001016,9.22e-26,75;UBERON:0001049,1.04e-24,52;UBERON:0005068,1.04e-24,52;UBERON:0006241,1.04e-24,52;UBERON:0007135,1.04e-24,52;UBERON:0000955,1.15e-21,47;UBERON:0006238,1.15e-21,47;UBERON:0002616,3.68e-21,46;UBERON:0003056,1.79e-20,49;UBERON:0010371,2.04e-20,73;UBERON:0004121,3.59e-20,95;UBERON:0000924,3.59e-20,95;UBERON:0006601,3.59e-20,95;UBERON:0002020,1.29e-19,34;UBERON:0003080,2.35e-18,40;UBERON:0002780,8.65e-18,39;UBERON:0001890,8.65e-18,39;UBERON:0006240,8.65e-18,39;UBERON:0003528,8.06e-17,29;UBERON:0002791,8.06e-17,29;UBERON:0001893,8.06e-17,29;UBERON:0010314,3.32e-16,92;UBERON:0000956,2.35e-12,21;UBERON:0001869,2.35e-12,21;UBERON:0000203,2.35e-12,21;UBERON:0002619,1.37e-10,17;UBERON:0002021,1.05e-07,10;UBERON:0000411,1.05e-07,10;UBERON:0001950,1.05e-07,10;UBERON:0003076,6.16e-07,12;UBERON:0003057,6.16e-07,12 | |||
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| ||
|short_description=p3@Calm2,p4@Calm1,p4@Calm3 | |||
}} | }} |
Latest revision as of 07:23, 26 September 2015
Short description: | p3@Calm2, p4@Calm1, p4@Calm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Calm2_5end, CAGE_peak_4_at_Calm1_5end, CAGE_peak_4_at_Calm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -46bp_to_ENSMUST00000173557_5end |
EntrezGene: | 12313,12314,12315 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.47e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.47e-12 | 23 |
ectodermal cell | 2.72e-11 | 44 |
neurectodermal cell | 2.72e-11 | 44 |
neural cell | 6.68e-11 | 43 |
neuron | 6.83e-10 | 33 |
neuronal stem cell | 6.83e-10 | 33 |
neuroblast | 6.83e-10 | 33 |
electrically signaling cell | 6.83e-10 | 33 |
electrically responsive cell | 3.79e-08 | 39 |
electrically active cell | 3.79e-08 | 39 |