FFCP PHASE1:Mm9::chr7:17377874..17377899,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:17377874..17377899,+
|short_description=p3@Slc1a5
|description=CAGE_peak_3_at_Slc1a5_5end
|association_with_transcript=-476bp_to_ENSMUST00000134407_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20514 | |EntrezGene=20514 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-476bp_to_ENSMUST00000134407_5end | |||
|cluster_id=chr7:17377874..17377899,+ | |||
|description=CAGE_peak_3_at_Slc1a5_5end | |||
|id=chr7:17377874..17377899,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.52e-07,3;CL:0002202,2.52e-07,3;CL:0000069,2.52e-07,3;CL:0002632,2.52e-07,3;CL:0002368,2.52e-07,3;CL:0000307,2.52e-07,3;CL:0000377,2.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.69e-21!130;UBERON:0000925!5.69e-21!130;UBERON:0006595!5.69e-21!130;UBERON:0001007!8.53e-21!128;UBERON:0001555!8.53e-21!128;UBERON:0007026!8.53e-21!128;UBERON:0005409!1.31e-19!59;UBERON:0004921!1.49e-19!126;UBERON:0004185!1.49e-19!126;UBERON:0000160!1.42e-15!43;UBERON:0005178!4.35e-14!17;UBERON:0005181!4.35e-14!17;UBERON:0002224!4.35e-14!17;UBERON:0000915!4.35e-14!17;UBERON:0008947!4.35e-14!17;UBERON:0003258!4.35e-14!17;UBERON:0000464!6.65e-13!57;UBERON:0002108!3.98e-12!16;UBERON:0002048!1.67e-11!14;UBERON:0000117!1.67e-11!14;UBERON:0000171!1.67e-11!14;UBERON:0000170!1.67e-11!14;UBERON:0005597!1.67e-11!14;UBERON:0000118!1.67e-11!14;UBERON:0000077!7.00e-11!97;UBERON:0005153!2.00e-10!17;UBERON:0001264!1.99e-09!12;UBERON:0003922!1.99e-09!12;UBERON:0002114!1.99e-09!12;UBERON:0003923!1.99e-09!12;UBERON:0003924!1.99e-09!12;UBERON:0003921!1.99e-09!12;UBERON:0001041!4.42e-09!92;UBERON:0000466!6.55e-09!79;UBERON:0001045!2.10e-08!13;UBERON:0005177!1.92e-07!85;UBERON:0002075!8.62e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.10e-17,12;UBERON:0005178,2.23e-14,17;UBERON:0005181,2.23e-14,17;UBERON:0002224,2.23e-14,17;UBERON:0000915,2.23e-14,17;UBERON:0008947,2.23e-14,17;UBERON:0003258,2.23e-14,17;UBERON:0002075,7.87e-13,19;UBERON:0005177,2.09e-11,79;UBERON:0002100,1.78e-10,90;UBERON:0005153,8.29e-10,17;UBERON:0001007,1.40e-09,116;UBERON:0001555,1.40e-09,116;UBERON:0007026,1.40e-09,116;UBERON:0002048,1.60e-09,14;UBERON:0000117,1.60e-09,14;UBERON:0000171,1.60e-09,14;UBERON:0000170,1.60e-09,14;UBERON:0005597,1.60e-09,14;UBERON:0000118,1.60e-09,14;UBERON:0004119,2.64e-09,118;UBERON:0000925,2.64e-09,118;UBERON:0006595,2.64e-09,118;UBERON:0004921,5.42e-09,114;UBERON:0005157,4.53e-08,20;UBERON:0003126,2.52e-07,3;UBERON:0001005,2.52e-07,3;UBERON:0007196,2.52e-07,3;UBERON:0001558,2.52e-07,3 | |||
|phase1_expression=0,0,0,0,0,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,1.14704640533585,0,0.86152399231815,0.861884930743556,0.950117097281869,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,4.32982082022428,1.77351905832569,1.51657333504435,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0.667134131534611,1.14135375667535,0,0.823494773620054,1.00534083520108,0.994782360205754,0.58489226135736,0,0.648414149624083,0.796565093017469,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.651859905768103,0.509235257325564,0.938760993154008,2.01007508930179,5.47500374037832,4.09780660501378,4.72905432318573,4.4292937929755,2.39182152986231,1.63863314715738,0.690739927463582,1.73578870297814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.64970122972535,0,0.242780636154981,1.209294227859,3.20628635585027,9.15435867930396,8.60818414242997,5.68542244970086,4.72593848320757,5.34746067577082,2.84433082142234,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0.42366414172764,51.3831167468061,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,0.203319467126849,0.540026704109006,0.209088296014469,2.18362563746178,2.96701562046606,2.56225712748541,2.35580347785627,1.42576470620972,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,5.9888774149979,0,0,0.857473516316263,20.0628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.516919220600519,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.639969691173627,1.14704640533585,0,0.86152399231815,0.861884930743556,0.950117097281869,1.51218077855958,0.886922042621219,0,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,4.32982082022428,1.77351905832569,1.51657333504435,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0.464473343720877,0.128867461322093,0.403367049246685,0.667134131534611,1.14135375667535,0,0.823494773620054,1.00534083520108,0.994782360205754,0.58489226135736,0,0.648414149624083,0.796565093017469,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.651859905768103,0.509235257325564,0.938760993154008,2.01007508930179,5.47500374037832,4.09780660501378,4.72905432318573,4.4292937929755,2.39182152986231,1.63863314715738,0.690739927463582,1.73578870297814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,1.64970122972535,0,0.242780636154981,1.209294227859,3.20628635585027,9.15435867930396,8.60818414242997,5.68542244970086,4.72593848320757,5.34746067577082,2.84433082142234,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0.42366414172764,51.3831167468061,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0.412773735926445,0,0,0,0,0,0,0,2.86401185404534,0.316335993581135,0.203319467126849,0.540026704109006,0.209088296014469,2.18362563746178,2.96701562046606,2.56225712748541,2.35580347785627,1.42576470620972,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,5.9888774149979,0,0,0.857473516316263,20.0628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0.824140228955577,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.192075457214608,0.516919220600519,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Slc1a5 | |||
}} | }} |
Latest revision as of 07:11, 26 September 2015
Short description: | p3@Slc1a5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc1a5_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | -476bp_to_ENSMUST00000134407_5end |
EntrezGene: | Slc1a5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.52e-07 | 3 |
epithelial cell of tracheobronchial tree | 2.52e-07 | 3 |
branched duct epithelial cell | 2.52e-07 | 3 |
epithelial cell of lower respiratory tract | 2.52e-07 | 3 |
respiratory epithelial cell | 2.52e-07 | 3 |
tracheal epithelial cell | 2.52e-07 | 3 |
tracheoblast | 2.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.10e-17 | 12 |
thoracic cavity element | 2.23e-14 | 17 |
thoracic segment organ | 2.23e-14 | 17 |
thoracic cavity | 2.23e-14 | 17 |
thoracic segment of trunk | 2.23e-14 | 17 |
respiratory primordium | 2.23e-14 | 17 |
endoderm of foregut | 2.23e-14 | 17 |
viscus | 7.87e-13 | 19 |
trunk region element | 2.09e-11 | 79 |
trunk | 1.78e-10 | 90 |
epithelial bud | 8.29e-10 | 17 |
digestive system | 1.40e-09 | 116 |
digestive tract | 1.40e-09 | 116 |
primitive gut | 1.40e-09 | 116 |
lung | 1.60e-09 | 14 |
respiratory tube | 1.60e-09 | 14 |
respiration organ | 1.60e-09 | 14 |
pair of lungs | 1.60e-09 | 14 |
lung primordium | 1.60e-09 | 14 |
lung bud | 1.60e-09 | 14 |
endoderm-derived structure | 2.64e-09 | 118 |
endoderm | 2.64e-09 | 118 |
presumptive endoderm | 2.64e-09 | 118 |
subdivision of digestive tract | 5.42e-09 | 114 |
epithelial fold | 4.53e-08 | 20 |
trachea | 2.52e-07 | 3 |
respiratory airway | 2.52e-07 | 3 |
tracheobronchial tree | 2.52e-07 | 3 |
lower respiratory tract | 2.52e-07 | 3 |