FFCP PHASE1:Mm9::chr7:134005864..134005907,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:134005864..134005907,-
|short_description=p2@Ino80e
|description=CAGE_peak_2_at_Ino80e_5end
|association_with_transcript=0bp_to_ENSMUST00000125624_5end
|E...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233875 | |EntrezGene=233875 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000125624_5end | |||
|cluster_id=chr7:134005864..134005907,- | |||
|description=CAGE_peak_2_at_Ino80e_5end | |||
|id=chr7:134005864..134005907,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.09e-14!73;UBERON:0005743!3.09e-14!73;UBERON:0002346!3.37e-14!71;UBERON:0003075!3.37e-14!71;UBERON:0007284!3.37e-14!71;UBERON:0000073!1.22e-13!75;UBERON:0001016!1.22e-13!75;UBERON:0001049!1.71e-13!52;UBERON:0005068!1.71e-13!52;UBERON:0006241!1.71e-13!52;UBERON:0007135!1.71e-13!52;UBERON:0003056!3.58e-13!49;UBERON:0000153!8.49e-13!94;UBERON:0000033!2.00e-12!63;UBERON:0007811!9.33e-12!86;UBERON:0004121!2.62e-11!102;UBERON:0000924!2.62e-11!102;UBERON:0006601!2.62e-11!102;UBERON:0002616!2.78e-11!49;UBERON:0000955!5.38e-11!50;UBERON:0006238!5.38e-11!50;UBERON:0003080!7.79e-11!40;UBERON:0002780!1.24e-10!39;UBERON:0001890!1.24e-10!39;UBERON:0006240!1.24e-10!39;UBERON:0002020!9.58e-09!34;UBERON:0002791!2.55e-07!29;UBERON:0003528!2.55e-07!29;UBERON:0001893!2.55e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.59e-16,64;UBERON:0003075,4.59e-16,64;UBERON:0007284,4.59e-16,64;UBERON:0001017,2.45e-14,73;UBERON:0001016,9.80e-14,75;UBERON:0001049,1.37e-13,52;UBERON:0005068,1.37e-13,52;UBERON:0006241,1.37e-13,52;UBERON:0007135,1.37e-13,52;UBERON:0003056,2.90e-13,49;UBERON:0000073,6.51e-13,54;UBERON:0010371,3.09e-12,73;UBERON:0002616,3.95e-12,46;UBERON:0004121,5.65e-12,95;UBERON:0000924,5.65e-12,95;UBERON:0006601,5.65e-12,95;UBERON:0000955,8.33e-12,47;UBERON:0006238,8.33e-12,47;UBERON:0003080,6.58e-11,40;UBERON:0002780,1.05e-10,39;UBERON:0001890,1.05e-10,39;UBERON:0006240,1.05e-10,39;UBERON:0002020,8.40e-09,34;UBERON:0010314,1.37e-07,92;UBERON:0003528,2.29e-07,29;UBERON:0002791,2.29e-07,29;UBERON:0001893,2.29e-07,29 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,1.00727563147134,0.934450562382103,0.387369970324729,2.81577444303333,2.10658073689794,1.71217968225505,1.19658238493005,0.684802919724823,0.874204024189974,2.33176833270964,1.61980213911861,5.59649502502517,0.788655413395594,0.548457734422955,0,14.5424026158329,1.39007331681239,2.08959831311148,1.59992422793407,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,1.26015064879965,1.10865255327652,5.71527606113668,3.69038872550742,0,2.3108129580102,2.1610503896604,1.22501613757421,0,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.755380907853464,0.506884656097573,0.917733760808408,3.12956537739216,3.2703773457067,1.5378032791413,1.36100929351998,1.39986421625363,4.31257693094915,1.00669563634642,1.45072428402269,0.336093799142464,0.514518872071894,0.573066879877513,0,4.04632921719196,2.64495489636016,5.07065122804943,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,2.39680088414724,4.99483796918021,4.35496371695606,3.64516033495565,2.94454945891935,3.42781181284564,3.3130281142742,4.04219637409348,4.2172007248024,2.75765635983006,2.20231761998777,1.91531007127782,1.0752457327937,5.14356522147756,4.29991924931325,3.64639359389732,1.67509799400829,2.8138130501584,1.83357897332172,2.06240009831567,2.84743361598206,4.47358669980721,1.21161909333094,1.88928900266964,2.31891590961342,2.58127163094416,0.679971333707751,1.07940638327563,3.24888208723835,0.896053774194671,2.80888840263504,1.53387290320252,1.81850203222008,0.70667914902068,1.26759077799012,2.56652954828636,2.54805239706646,0,1.29894624606728,1.26679932737549,1.51657333504435,3.31133251185274,1.29468941823586,1.7813056687779,2.4287945747259,2.74018930480927,2.07553947530453,0.753613202763113,1.05829836422134,1.25666591329675,0.988779870937496,2.02439099687876,4.42305275974937,2.26473589926373,0.883366073841574,0,0,3.22058876712702,5.23616767033638,1.02182822083437,2.87556298814209,5.39912457894067,2.41433431438823,2.69623150928681,1.37250180845588,5.78010019719176,2.08589184230732,3.06858548796397,3.1168206683934,1.94689515681309,2.74966282395854,2.36373244159177,2.52722758433675,3.15662783829711,3.513251959993,2.29902104433473,3.06105620669094,2.86339153887859,2.38127747029647,3.45907044769094,2.71735001223214,2.58703370739016,7.97601573851516,3.02569728268511,3.87092473160687,3.06874025398605,1.39023624612799,2.43776516565517,1.85203922767149,1.99034266818493,0,1.28673953557358,3.40996199274711,2.27838349789052,1.87620847984877,0.540186184383045,2.60419209143731,2.36117078096885,1.69693824176116,1.39520366850245,1.07309360559848,1.86824547787471,1.48103864922132,0.656669856316381,1.05389452409612,0.730999937126662,0.878200461164203,0.805238512562231,2.10289948564127,4.93942139420565,1.65209391491899,0.528901133327089,4.69234151177515,2.78684006232526,2.19074684247559,1.81515172161008,1.55664630691409,1.33157938278791,3.32170343081158,1.31759163779209,1.50801125280162,1.59165177632921,0.779856348476481,0,1.29682829924817,0.995706366271836,5.12103332573321,2.51346727741403,1.1270773567308,2.64746726198909,2.13347735884388,1.54298803758701,2.52946148497029,1.77132177575523,0.784993639206874,2.46794327843601,2.07516838961004,2.00214126859313,1.57247196090562,3.37293168577281,1.01430060694251,2.17059443777175,1.52775511068852,1.15078454980324,1.45921704097532,3.56929837144506,0,0.744281895337007,0.936113019343682,1.51547326768267,1.97337154874103,3.37710464954357,1.29327233116623,3.03186258832776,2.11854469374634,2.20668611507745,2.11221223459652,2.01007508930179,1.42826184531608,1.17080188714679,0.630540576424764,1.32878813789265,0.956728611944923,1.3109065177259,0.690739927463582,1.15719246865209,0,0,0.983528546038072,0.827810238914197,1.12385412991454,2.57865710502847,0.983609672260053,1.51482556322624,1.26203287766503,2.73307121007647,2.80050417052639,1.91175038362042,1.55959071857676,1.98153571552183,1.61924280669958,2.63030272120181,2.76701444562566,1.60660658210904,2.12910127812403,3.5613120733451,2.11753047159649,2.14461159864296,2.65490276679926,2.42780636154981,2.72091201268276,1.13163047853539,0.885905678642318,0.307435147943927,2.06742634534577,1.81766864738753,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,3.06395645178409,2.70091641046965,4.78627129996192,2.57204442037911,5.67488747655275,4.28085162244969,3.62007845324666,4.26250928760439,1.64270195644597,0.847328283455281,1.7642271844397,1.31909002353184,1.77610869365496,1.74907482291652,1.55184047204077,0.820704498725306,2.04036585640896,2.03967832211561,1.70870880797853,2.88941615148511,0.925972636848558,1.69531611304222,3.41735569302563,4.34678529092393,2.37969801991397,1.53946597556024,0.967399816630967,0,3.32152793260192,2.03319467126849,1.72808545314882,1.25452977608681,1.31017538247707,0.539457385539283,1.57041565878138,1.57053565190418,1.29614973291793,2.4853572523477,95.8277995763124,1.94371509857172,2.48187735685646,2.52786544847262,2.58319646955462,3.21016638432478,2.11243029562357,3.9061315453185,4.19437377702843,43.0019735070291,51.5573711201579,3.16011120628178,2.43270258348197,2.46506297195585,2.07873316764472,2.8644271306797,2.18549490259391,4.44723163223885,2.80610101631697,2.01932899896295,3.04827226619999,1.81487133246313,1.65678397257579,1.44317762460494,1.98690733708667,0.906921534460845,1.33191572024439,2.15313255862742,1.00730769818447,0.772758376128762,0.93841237725591,0.549454872801795,1.2862102744744,1.00314420807073,5.0827665835536,2.30162618253588,5.15605962095457,2.749650917499,4.11049511862385,3.0215755895588,3.37511250115903,3.15224842256954,1.81256963593682,4.14208249401456,2.49089634202024,3.99024873401031,3.75613932659095,0.729320151204882,2.72497111416377,1.83843508450014,1.55572709461131,2.26638562962784,2.24643446714271,2.27427490587418,2.28131369901216,1.32038438970253,1.12369808963859,1.72867911493147,1.95280594449085,2.38146845641537,1.27472758539341,0.77163688185482,2.47251540481984,1.91358596174717,1.37147700954166,1.59728225543404,2.38436189947321,0.872078499793971,1.69396884747595,1.86152137361688,1.82927972872773,2.36762740294059,0.950628796921032,2.80571135828869,2.13543032623513,0.985044823755635,2.04615521584845,1.54936841185966,1.73615949883027,3.99696924700713,1.87145286756327,0.644613162144895,2.67803664896381,1.98532277207564,1.39120701372253 | |phase1_expression=2.24208385946712,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,1.00727563147134,0.934450562382103,0.387369970324729,2.81577444303333,2.10658073689794,1.71217968225505,1.19658238493005,0.684802919724823,0.874204024189974,2.33176833270964,1.61980213911861,5.59649502502517,0.788655413395594,0.548457734422955,0,14.5424026158329,1.39007331681239,2.08959831311148,1.59992422793407,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,0.380046838912748,1.26015064879965,1.10865255327652,5.71527606113668,3.69038872550742,0,2.3108129580102,2.1610503896604,1.22501613757421,0,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,0.755380907853464,0.506884656097573,0.917733760808408,3.12956537739216,3.2703773457067,1.5378032791413,1.36100929351998,1.39986421625363,4.31257693094915,1.00669563634642,1.45072428402269,0.336093799142464,0.514518872071894,0.573066879877513,0,4.04632921719196,2.64495489636016,5.07065122804943,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0.7104801149461,2.39680088414724,4.99483796918021,4.35496371695606,3.64516033495565,2.94454945891935,3.42781181284564,3.3130281142742,4.04219637409348,4.2172007248024,2.75765635983006,2.20231761998777,1.91531007127782,1.0752457327937,5.14356522147756,4.29991924931325,3.64639359389732,1.67509799400829,2.8138130501584,1.83357897332172,2.06240009831567,2.84743361598206,4.47358669980721,1.21161909333094,1.88928900266964,2.31891590961342,2.58127163094416,0.679971333707751,1.07940638327563,3.24888208723835,0.896053774194671,2.80888840263504,1.53387290320252,1.81850203222008,0.70667914902068,1.26759077799012,2.56652954828636,2.54805239706646,0,1.29894624606728,1.26679932737549,1.51657333504435,3.31133251185274,1.29468941823586,1.7813056687779,2.4287945747259,2.74018930480927,2.07553947530453,0.753613202763113,1.05829836422134,1.25666591329675,0.988779870937496,2.02439099687876,4.42305275974937,2.26473589926373,0.883366073841574,0,0,3.22058876712702,5.23616767033638,1.02182822083437,2.87556298814209,5.39912457894067,2.41433431438823,2.69623150928681,1.37250180845588,5.78010019719176,2.08589184230732,3.06858548796397,3.1168206683934,1.94689515681309,2.74966282395854,2.36373244159177,2.52722758433675,3.15662783829711,3.513251959993,2.29902104433473,3.06105620669094,2.86339153887859,2.38127747029647,3.45907044769094,2.71735001223214,2.58703370739016,7.97601573851516,3.02569728268511,3.87092473160687,3.06874025398605,1.39023624612799,2.43776516565517,1.85203922767149,1.99034266818493,0,1.28673953557358,3.40996199274711,2.27838349789052,1.87620847984877,0.540186184383045,2.60419209143731,2.36117078096885,1.69693824176116,1.39520366850245,1.07309360559848,1.86824547787471,1.48103864922132,0.656669856316381,1.05389452409612,0.730999937126662,0.878200461164203,0.805238512562231,2.10289948564127,4.93942139420565,1.65209391491899,0.528901133327089,4.69234151177515,2.78684006232526,2.19074684247559,1.81515172161008,1.55664630691409,1.33157938278791,3.32170343081158,1.31759163779209,1.50801125280162,1.59165177632921,0.779856348476481,0,1.29682829924817,0.995706366271836,5.12103332573321,2.51346727741403,1.1270773567308,2.64746726198909,2.13347735884388,1.54298803758701,2.52946148497029,1.77132177575523,0.784993639206874,2.46794327843601,2.07516838961004,2.00214126859313,1.57247196090562,3.37293168577281,1.01430060694251,2.17059443777175,1.52775511068852,1.15078454980324,1.45921704097532,3.56929837144506,0,0.744281895337007,0.936113019343682,1.51547326768267,1.97337154874103,3.37710464954357,1.29327233116623,3.03186258832776,2.11854469374634,2.20668611507745,2.11221223459652,2.01007508930179,1.42826184531608,1.17080188714679,0.630540576424764,1.32878813789265,0.956728611944923,1.3109065177259,0.690739927463582,1.15719246865209,0,0,0.983528546038072,0.827810238914197,1.12385412991454,2.57865710502847,0.983609672260053,1.51482556322624,1.26203287766503,2.73307121007647,2.80050417052639,1.91175038362042,1.55959071857676,1.98153571552183,1.61924280669958,2.63030272120181,2.76701444562566,1.60660658210904,2.12910127812403,3.5613120733451,2.11753047159649,2.14461159864296,2.65490276679926,2.42780636154981,2.72091201268276,1.13163047853539,0.885905678642318,0.307435147943927,2.06742634534577,1.81766864738753,1.42598951353889,1.26414703174326,2.10837217149998,1.03135543248187,3.06395645178409,2.70091641046965,4.78627129996192,2.57204442037911,5.67488747655275,4.28085162244969,3.62007845324666,4.26250928760439,1.64270195644597,0.847328283455281,1.7642271844397,1.31909002353184,1.77610869365496,1.74907482291652,1.55184047204077,0.820704498725306,2.04036585640896,2.03967832211561,1.70870880797853,2.88941615148511,0.925972636848558,1.69531611304222,3.41735569302563,4.34678529092393,2.37969801991397,1.53946597556024,0.967399816630967,0,3.32152793260192,2.03319467126849,1.72808545314882,1.25452977608681,1.31017538247707,0.539457385539283,1.57041565878138,1.57053565190418,1.29614973291793,2.4853572523477,95.8277995763124,1.94371509857172,2.48187735685646,2.52786544847262,2.58319646955462,3.21016638432478,2.11243029562357,3.9061315453185,4.19437377702843,43.0019735070291,51.5573711201579,3.16011120628178,2.43270258348197,2.46506297195585,2.07873316764472,2.8644271306797,2.18549490259391,4.44723163223885,2.80610101631697,2.01932899896295,3.04827226619999,1.81487133246313,1.65678397257579,1.44317762460494,1.98690733708667,0.906921534460845,1.33191572024439,2.15313255862742,1.00730769818447,0.772758376128762,0.93841237725591,0.549454872801795,1.2862102744744,1.00314420807073,5.0827665835536,2.30162618253588,5.15605962095457,2.749650917499,4.11049511862385,3.0215755895588,3.37511250115903,3.15224842256954,1.81256963593682,4.14208249401456,2.49089634202024,3.99024873401031,3.75613932659095,0.729320151204882,2.72497111416377,1.83843508450014,1.55572709461131,2.26638562962784,2.24643446714271,2.27427490587418,2.28131369901216,1.32038438970253,1.12369808963859,1.72867911493147,1.95280594449085,2.38146845641537,1.27472758539341,0.77163688185482,2.47251540481984,1.91358596174717,1.37147700954166,1.59728225543404,2.38436189947321,0.872078499793971,1.69396884747595,1.86152137361688,1.82927972872773,2.36762740294059,0.950628796921032,2.80571135828869,2.13543032623513,0.985044823755635,2.04615521584845,1.54936841185966,1.73615949883027,3.99696924700713,1.87145286756327,0.644613162144895,2.67803664896381,1.98532277207564,1.39120701372253 | ||
|short_description=p2@Ino80e | |||
}} | }} |
Latest revision as of 21:43, 25 September 2015
Short description: | p2@Ino80e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ino80e_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000125624_5end |
EntrezGene: | Ino80e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.59e-16 | 64 |
neural plate | 4.59e-16 | 64 |
presumptive neural plate | 4.59e-16 | 64 |
central nervous system | 2.45e-14 | 73 |
nervous system | 9.80e-14 | 75 |
neural tube | 1.37e-13 | 52 |
neural rod | 1.37e-13 | 52 |
future spinal cord | 1.37e-13 | 52 |
neural keel | 1.37e-13 | 52 |
pre-chordal neural plate | 2.90e-13 | 49 |
regional part of nervous system | 6.51e-13 | 54 |
ecto-epithelium | 3.09e-12 | 73 |
regional part of brain | 3.95e-12 | 46 |
ectoderm-derived structure | 5.65e-12 | 95 |
ectoderm | 5.65e-12 | 95 |
presumptive ectoderm | 5.65e-12 | 95 |
brain | 8.33e-12 | 47 |
future brain | 8.33e-12 | 47 |
anterior neural tube | 6.58e-11 | 40 |
regional part of forebrain | 1.05e-10 | 39 |
forebrain | 1.05e-10 | 39 |
future forebrain | 1.05e-10 | 39 |
gray matter | 8.40e-09 | 34 |
structure with developmental contribution from neural crest | 1.37e-07 | 92 |
brain grey matter | 2.29e-07 | 29 |
regional part of telencephalon | 2.29e-07 | 29 |
telencephalon | 2.29e-07 | 29 |