FFCP PHASE1:Mm9::chr6:86354335..86354374,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:86354335..86354374,+
|short_description=p2@Tia1
|description=CAGE_peak_2_at_Tia1_5end
|association_with_transcript=0bp_to_ENSMUST00000134142_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21841 | |EntrezGene=21841 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=425 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000134142_5end | |||
|cluster_id=chr6:86354335..86354374,+ | |||
|description=CAGE_peak_2_at_Tia1_5end | |||
|id=chr6:86354335..86354374,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.90e-12!33;CL:0000047!4.90e-12!33;CL:0000031!4.90e-12!33;CL:0000404!4.90e-12!33;CL:0000393!9.58e-10!39;CL:0000211!9.58e-10!39;CL:0000221!1.07e-08!44;CL:0000133!1.07e-08!44;CL:0002319!3.06e-08!43;CL:0000117!5.05e-07!23;CL:0000337!5.05e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.90e-12,33;CL:0000047,4.90e-12,33;CL:0000031,4.90e-12,33;CL:0000404,4.90e-12,33;CL:0000393,9.57e-10,39;CL:0000211,9.57e-10,39;CL:0000221,1.07e-08,44;CL:0000133,1.07e-08,44;CL:0002319,3.06e-08,43;CL:0000117,5.05e-07,23;CL:0000337,5.05e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.72e-08!102;UBERON:0000924!2.72e-08!102;UBERON:0006601!2.72e-08!102;UBERON:0000073!1.23e-07!75;UBERON:0001016!1.23e-07!75;UBERON:0001017!2.06e-07!73;UBERON:0005743!2.06e-07!73;UBERON:0002346!5.62e-07!71;UBERON:0003075!5.62e-07!71;UBERON:0007284!5.62e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.07e-08,95;UBERON:0000924,1.07e-08,95;UBERON:0006601,1.07e-08,95;UBERON:0001016,1.22e-07,75;UBERON:0002346,1.59e-07,64;UBERON:0003075,1.59e-07,64;UBERON:0007284,1.59e-07,64;UBERON:0010314,1.89e-07,92;UBERON:0001017,2.05e-07,73;UBERON:0010371,2.16e-07,73 | |||
|phase1_expression=22.9012851359855,1.04692622291808,3.63999391511629,3.0246421130683,1.00179145989269,4.70061961353291,4.20502753071946,2.06597317506522,2.81577444303333,3.5109678948299,1.71217968225505,2.79202556483677,1.54080656938085,2.01066925563694,0.333109761815663,1.41732687172878,0.699561878128147,3.62781490161973,2.87940310572051,1.27316895539409,5.10259740906419,8.73760370567791,11.7539905112521,2.3998863419011,2.98232065387321,0,2.58457197695445,4.52489588640367,1.71021077510736,0.756090389279792,3.32595765982957,2.54012269383853,0,0,5.77703239502549,5.65197794218874,6.53341940039581,14.6486070757918,10.9386948233332,13.088093599345,6.47054636834116,6.83045484958446,15.5363312969969,6.42073771675444,7.09638518536602,4.40512205188036,2.34717403304412,6.32272953503295,3.51497892375155,5.24960727500565,2.37976916763116,4.31257693094915,2.68452169692378,0.725362142011344,1.68046899571232,4.11615097657515,4.01146815914259,4.64104883049698,19.2200637816618,12.6957835025288,13.9442908771359,2.03306719241479,0,0,2.96659908770092,0.7104801149461,2.09720077362883,6.91592949578798,28.2035745479059,26.3261579746797,21.6634710191923,6.85562362569129,6.62605622854841,29.7652642092338,22.8112221023403,24.8189072384706,8.8092704799511,3.95830748064082,4.45458946443106,21.761237475482,20.2187692361325,23.4411016750542,3.90856198601933,9.00420176050688,6.72312290217964,14.4368006882097,12.1015928679237,21.2495368240843,6.6639050133202,11.1845908958043,4.05810284182349,1.72084775396277,2.719885334831,2.15881276655127,5.19821133958135,1.34408066129201,2.52799956237153,5.45377032249785,6.23486411046885,3.5333957451034,19.2955485094052,7.69958864485907,17.8363667794652,7.11066703153331,4.5463118612355,7.09407623330276,2.52762222507392,1.94112595522402,6.47344709117929,4.75014845007439,9.71517829890361,5.78484408793068,4.38169444786511,6.33035090321015,8.11362079236363,4.02133092254962,3.95511948374998,4.19338135067744,1.76922110389975,8.08834249737046,6.62524555381181,3.87900202508178,0,5.27005434620785,5.02672096352292,2.29911349687732,7.54835284387298,2.39961092397363,7.24300294316469,8.68785708547972,4.57500602818627,9.5497307605777,4.51943232499919,4.60287823194595,4.1557608911912,6.48965052271031,11.2023300235348,5.97153458928446,6.57079171927554,2.52530227063769,24.3325228340256,21.380895712313,17.8261508507296,19.7423311364787,21.8397162275762,25.3665166164003,20.5206776785806,6.46758426847539,11.4251036254406,22.3145174598027,19.1786725338704,10.7405908889512,17.2389294519871,9.4028084960985,9.87754254758129,12.1410902759281,1.40442637462647,5.40430604940902,4.54661599032948,11.5990432619881,13.6025114789036,10.2635375032778,12.7842157216014,8.46086196513836,8.94749254746794,9.30135779001631,7.24338183778972,5.3712057488898,8.88623189532794,7.71587081171748,4.86412857275134,5.26319954731196,3.51280184465681,2.95254121272818,6.51898840548794,20.5809224758569,1.65209391491899,0.793351699990633,17.276348293354,13.237490296045,8.24751752461397,6.25218926332362,4.22518283305254,4.56541502670142,2.37264530772256,2.14108641141214,3.51869292320377,5.17286827306992,5.45899443933536,3.59527763461689,2.59365659849633,2.98711909881551,9.48339504765408,13.3670759753383,13.5249282807697,14.0519416213267,9.11576689687841,10.2398297039865,9.10606134589305,3.24742325555125,3.29697328466887,2.22114895059241,2.37162101669719,2.8363667971736,2.16214894624523,3.14806957338795,0.811440485554012,2.894125917029,3.05551022137704,3.45235364940973,2.59416362840057,3.0201755450689,2.87536413054709,1.86070473834252,4.05648975048929,2.52578877947112,1.97337154874103,1.4473305640901,3.69506380333209,14.0223644710159,19.5557971730431,19.1811946925963,10.7957514212711,11.8929442783689,6.66522194480839,8.39074685788535,12.4531763843891,13.9522754478728,15.1482030224613,8.68475567993411,6.73471429276993,5.06271705035291,4.52373851817817,1.08781136763742,2.45882136509518,9.93372286697037,6.26147300952389,5.27452589664914,6.22952792431367,5.30188947129183,17.6684602873104,16.7888660047555,21.1114929778143,14.8160654730582,19.8290819933331,22.9291989938954,14.9779959619711,16.9508397588561,18.5785255634866,9.96096080907602,8.94222536812092,7.47875535402472,9.77321756121457,11.71287873105,1.32745138339963,4.37005145078967,5.44182402536552,6.97838795096823,2.65771703592696,5.22639751504677,5.68542244970086,7.99774204850512,8.19943970284859,5.05658812697306,2.10837217149998,5.15677716240934,11.234506989875,23.7680644121329,12.1597162755789,18.0043109426538,18.2660440651542,13.5560301377574,16.29035303961,5.17590413494819,4.4587624532105,2.33015277950202,5.51320995137405,4.122156323537,6.13564821444441,5.66941494324665,4.65552141612232,5.41664969158702,3.20628920292836,6.67531087237835,1.70870880797853,9.08102219038179,4.62986318424279,4.33247451110789,1.6403307326523,2.28778173206523,6.11922347977879,7.69732987780119,8.43019840206985,0.954670618015114,12.4952717464548,14.0290432317526,10.0444966964275,11.7089445768102,8.51613998610093,7.552403397549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| |phase1_expression=22.9012851359855,1.04692622291808,3.63999391511629,3.0246421130683,1.00179145989269,4.70061961353291,4.20502753071946,2.06597317506522,2.81577444303333,3.5109678948299,1.71217968225505,2.79202556483677,1.54080656938085,2.01066925563694,0.333109761815663,1.41732687172878,0.699561878128147,3.62781490161973,2.87940310572051,1.27316895539409,5.10259740906419,8.73760370567791,11.7539905112521,2.3998863419011,2.98232065387321,0,2.58457197695445,4.52489588640367,1.71021077510736,0.756090389279792,3.32595765982957,2.54012269383853,0,0,5.77703239502549,5.65197794218874,6.53341940039581,14.6486070757918,10.9386948233332,13.088093599345,6.47054636834116,6.83045484958446,15.5363312969969,6.42073771675444,7.09638518536602,4.40512205188036,2.34717403304412,6.32272953503295,3.51497892375155,5.24960727500565,2.37976916763116,4.31257693094915,2.68452169692378,0.725362142011344,1.68046899571232,4.11615097657515,4.01146815914259,4.64104883049698,19.2200637816618,12.6957835025288,13.9442908771359,2.03306719241479,0,0,2.96659908770092,0.7104801149461,2.09720077362883,6.91592949578798,28.2035745479059,26.3261579746797,21.6634710191923,6.85562362569129,6.62605622854841,29.7652642092338,22.8112221023403,24.8189072384706,8.8092704799511,3.95830748064082,4.45458946443106,21.761237475482,20.2187692361325,23.4411016750542,3.90856198601933,9.00420176050688,6.72312290217964,14.4368006882097,12.1015928679237,21.2495368240843,6.6639050133202,11.1845908958043,4.05810284182349,1.72084775396277,2.719885334831,2.15881276655127,5.19821133958135,1.34408066129201,2.52799956237153,5.45377032249785,6.23486411046885,3.5333957451034,19.2955485094052,7.69958864485907,17.8363667794652,7.11066703153331,4.5463118612355,7.09407623330276,2.52762222507392,1.94112595522402,6.47344709117929,4.75014845007439,9.71517829890361,5.78484408793068,4.38169444786511,6.33035090321015,8.11362079236363,4.02133092254962,3.95511948374998,4.19338135067744,1.76922110389975,8.08834249737046,6.62524555381181,3.87900202508178,0,5.27005434620785,5.02672096352292,2.29911349687732,7.54835284387298,2.39961092397363,7.24300294316469,8.68785708547972,4.57500602818627,9.5497307605777,4.51943232499919,4.60287823194595,4.1557608911912,6.48965052271031,11.2023300235348,5.97153458928446,6.57079171927554,2.52530227063769,24.3325228340256,21.380895712313,17.8261508507296,19.7423311364787,21.8397162275762,25.3665166164003,20.5206776785806,6.46758426847539,11.4251036254406,22.3145174598027,19.1786725338704,10.7405908889512,17.2389294519871,9.4028084960985,9.87754254758129,12.1410902759281,1.40442637462647,5.40430604940902,4.54661599032948,11.5990432619881,13.6025114789036,10.2635375032778,12.7842157216014,8.46086196513836,8.94749254746794,9.30135779001631,7.24338183778972,5.3712057488898,8.88623189532794,7.71587081171748,4.86412857275134,5.26319954731196,3.51280184465681,2.95254121272818,6.51898840548794,20.5809224758569,1.65209391491899,0.793351699990633,17.276348293354,13.237490296045,8.24751752461397,6.25218926332362,4.22518283305254,4.56541502670142,2.37264530772256,2.14108641141214,3.51869292320377,5.17286827306992,5.45899443933536,3.59527763461689,2.59365659849633,2.98711909881551,9.48339504765408,13.3670759753383,13.5249282807697,14.0519416213267,9.11576689687841,10.2398297039865,9.10606134589305,3.24742325555125,3.29697328466887,2.22114895059241,2.37162101669719,2.8363667971736,2.16214894624523,3.14806957338795,0.811440485554012,2.894125917029,3.05551022137704,3.45235364940973,2.59416362840057,3.0201755450689,2.87536413054709,1.86070473834252,4.05648975048929,2.52578877947112,1.97337154874103,1.4473305640901,3.69506380333209,14.0223644710159,19.5557971730431,19.1811946925963,10.7957514212711,11.8929442783689,6.66522194480839,8.39074685788535,12.4531763843891,13.9522754478728,15.1482030224613,8.68475567993411,6.73471429276993,5.06271705035291,4.52373851817817,1.08781136763742,2.45882136509518,9.93372286697037,6.26147300952389,5.27452589664914,6.22952792431367,5.30188947129183,17.6684602873104,16.7888660047555,21.1114929778143,14.8160654730582,19.8290819933331,22.9291989938954,14.9779959619711,16.9508397588561,18.5785255634866,9.96096080907602,8.94222536812092,7.47875535402472,9.77321756121457,11.71287873105,1.32745138339963,4.37005145078967,5.44182402536552,6.97838795096823,2.65771703592696,5.22639751504677,5.68542244970086,7.99774204850512,8.19943970284859,5.05658812697306,2.10837217149998,5.15677716240934,11.234506989875,23.7680644121329,12.1597162755789,18.0043109426538,18.2660440651542,13.5560301377574,16.29035303961,5.17590413494819,4.4587624532105,2.33015277950202,5.51320995137405,4.122156323537,6.13564821444441,5.66941494324665,4.65552141612232,5.41664969158702,3.20628920292836,6.67531087237835,1.70870880797853,9.08102219038179,4.62986318424279,4.33247451110789,1.6403307326523,2.28778173206523,6.11922347977879,7.69732987780119,8.43019840206985,0.954670618015114,12.4952717464548,14.0290432317526,10.0444966964275,11.7089445768102,8.51613998610093,7.552403397549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| ||
|short_description=p2@Tia1 | |||
}} | }} |
Latest revision as of 20:17, 1 October 2015
Short description: | p2@Tia1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tia1_5end |
Coexpression cluster: | MCL_coexpression_mm9:425 |
Association with transcript: | 0bp_to_ENSMUST00000134142_5end |
EntrezGene: | Tia1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.90e-12 | 33 |
neuronal stem cell | 4.90e-12 | 33 |
neuroblast | 4.90e-12 | 33 |
electrically signaling cell | 4.90e-12 | 33 |
electrically responsive cell | 9.57e-10 | 39 |
electrically active cell | 9.57e-10 | 39 |
ectodermal cell | 1.07e-08 | 44 |
neurectodermal cell | 1.07e-08 | 44 |
neural cell | 3.06e-08 | 43 |
CNS neuron (sensu Vertebrata) | 5.05e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.05e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.07e-08 | 95 |
ectoderm | 1.07e-08 | 95 |
presumptive ectoderm | 1.07e-08 | 95 |
nervous system | 1.22e-07 | 75 |
neurectoderm | 1.59e-07 | 64 |
neural plate | 1.59e-07 | 64 |
presumptive neural plate | 1.59e-07 | 64 |
structure with developmental contribution from neural crest | 1.89e-07 | 92 |
central nervous system | 2.05e-07 | 73 |
ecto-epithelium | 2.16e-07 | 73 |