FFCP PHASE1:Mm9::chr6:83781730..83781744,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:83781730..83781744,-
|short_description=p3@Paip2b
|description=CAGE_peak_3_at_Paip2b_5end
|association_with_transcript=0bp_to_ENSMUST00000058383,NM_146169,...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=232164 | |EntrezGene=232164 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q91W45 | |UniProt=Q91W45 | ||
|association_with_transcript=0bp_to_ENSMUST00000058383,NM_146169,uc009cok.2_5end | |||
|cluster_id=chr6:83781730..83781744,- | |||
|description=CAGE_peak_3_at_Paip2b_5end | |||
|id=chr6:83781730..83781744,- | |||
|ontology_enrichment_celltype=CL:0000117!2.50e-14!23;CL:0000337!2.50e-14!23;CL:0000540!1.01e-09!33;CL:0000047!1.01e-09!33;CL:0000031!1.01e-09!33;CL:0000404!1.01e-09!33;CL:0000393!8.61e-08!39;CL:0000211!8.61e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-14,23;CL:0000337,2.48e-14,23;CL:0000540,9.99e-10,33;CL:0000047,9.99e-10,33;CL:0000031,9.99e-10,33;CL:0000404,9.99e-10,33;CL:0000393,8.57e-08,39;CL:0000211,8.57e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.59e-16!34;UBERON:0000033!3.54e-16!63;UBERON:0003056!7.19e-16!49;UBERON:0001049!3.19e-15!52;UBERON:0005068!3.19e-15!52;UBERON:0006241!3.19e-15!52;UBERON:0007135!3.19e-15!52;UBERON:0002346!7.28e-15!71;UBERON:0003075!7.28e-15!71;UBERON:0007284!7.28e-15!71;UBERON:0001017!1.77e-14!73;UBERON:0005743!1.77e-14!73;UBERON:0000073!3.51e-14!75;UBERON:0001016!3.51e-14!75;UBERON:0000955!3.88e-14!50;UBERON:0006238!3.88e-14!50;UBERON:0002616!4.78e-14!49;UBERON:0002791!1.10e-13!29;UBERON:0003528!1.10e-13!29;UBERON:0001893!1.10e-13!29;UBERON:0004121!1.37e-13!102;UBERON:0000924!1.37e-13!102;UBERON:0006601!1.37e-13!102;UBERON:0003080!5.41e-13!40;UBERON:0002780!1.69e-12!39;UBERON:0001890!1.69e-12!39;UBERON:0006240!1.69e-12!39;UBERON:0000153!1.70e-11!94;UBERON:0007811!5.25e-11!86;UBERON:0000025!3.00e-10!114;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0004111!1.36e-09!122;UBERON:0002619!5.02e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.39e-17,64;UBERON:0003075,2.39e-17,64;UBERON:0007284,2.39e-17,64;UBERON:0010371,7.44e-17,73;UBERON:0000073,8.28e-17,54;UBERON:0002020,1.57e-16,34;UBERON:0003056,7.11e-16,49;UBERON:0004121,2.99e-15,95;UBERON:0000924,2.99e-15,95;UBERON:0006601,2.99e-15,95;UBERON:0001049,3.16e-15,52;UBERON:0005068,3.16e-15,52;UBERON:0006241,3.16e-15,52;UBERON:0007135,3.16e-15,52;UBERON:0010314,4.10e-15,92;UBERON:0001017,1.79e-14,73;UBERON:0001016,3.55e-14,75;UBERON:0003528,1.08e-13,29;UBERON:0002791,1.08e-13,29;UBERON:0001893,1.08e-13,29;UBERON:0003080,5.36e-13,40;UBERON:0000955,1.21e-12,47;UBERON:0006238,1.21e-12,47;UBERON:0002616,1.49e-12,46;UBERON:0002780,1.67e-12,39;UBERON:0001890,1.67e-12,39;UBERON:0006240,1.67e-12,39;UBERON:0000025,3.22e-10,114;UBERON:0000956,3.33e-10,21;UBERON:0001869,3.33e-10,21;UBERON:0000203,3.33e-10,21;UBERON:0004111,1.46e-09,122;UBERON:0002619,5.00e-08,17 | |||
|phase1_expression=6.08565618998217,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,1.93684985162364,1.40788722151667,2.10658073689794,4.96532107853964,3.11111420081812,4.28001824828014,2.44777126773193,2.6648780945253,1.21485160433896,1.39912375625629,2.5236973228659,2.74228867211478,1.69755860719212,1.9559956734746,1.98581902401771,2.61199789138935,0.799962113967033,1.14704640533585,0,0,0.215471232685889,1.14014051673824,3.2763916868791,1.77384408524244,4.44521471421742,3.69038872550742,0,3.75507105676657,2.49351968037739,2.45003227514843,0.837063261473815,0.7813353445238,0,0,0,0.485510353031154,3.52511090331616,3.64956952390252,3.12029478674859,1.56478268869608,2.61630187656536,2.85592037554813,4.27745777963423,4.19959264876088,5.75010257459886,3.02008690903925,0.725362142011344,3.36093799142464,1.54355661621568,3.15186783932632,4.12537673821954,9.5088736604011,12.6957835025288,11.4089652631112,3.38844532069132,0.889294796111139,0.449949858640699,0,1.4209602298922,0.599200221036809,1.53687322128622,10.8874092923902,11.340498819862,11.9885227970288,7.14127461009509,9.05561017901615,14.5764051065795,11.0222291670972,12.8690630125403,6.60695285996332,8.2996769755372,10.9060638611933,10.1552441552249,11.8019060247108,13.5437476344758,6.42120897703176,6.19038871034848,8.09830713217094,10.0173719061047,10.5355043791336,10.0655700745662,4.08921443999194,3.32514864469856,5.50742528533188,1.72084775396277,2.719885334831,1.61910957491345,3.89865850468601,4.03224198387602,2.66844398250329,2.55645483867087,5.97507810586598,3.88673531961374,3.94361575374705,5.13305909657271,5.09610479413291,14.2213340630666,1.73192832808971,2.53359865475099,2.52762222507392,2.05530983494308,2.33044095282455,1.63286352971307,3.46970653532272,2.74018930480927,2.99800146432876,4.37095657602605,4.58595957829249,1.88499886994513,1.23597483867187,3.7595832799177,1.76922110389975,4.04417124868523,2.87093973998512,2.90925151881133,1.86391761218122,4.9772735491963,5.44561437714983,1.02182822083437,2.99537811264801,2.39961092397363,1.90605340609597,7.63932260964596,4.11750542536764,13.8219787324151,6.43149984711423,4.34716277461562,6.44142938134636,7.30085683804909,6.61955865027056,2.73695335342205,4.54900965180614,3.36706969418358,4.81445638962004,5.9774547152703,5.94205028357652,6.48030716693575,8.84474488967262,8.32739181851524,11.1505052226077,7.24369438069244,3.44908788692548,4.34943984385984,3.51902248327898,6.79506770525482,5.83899223373756,6.268538997399,4.7329891373827,6.96619933864726,1.40442637462647,2.31613116403244,1.42081749697796,2.69263504296152,5.39409937956521,4.14142741360334,3.31442629819294,4.13204886669548,6.78775296704464,4.88321283975857,3.75582761959467,4.67061369468678,3.78487654801005,5.58169377868924,4.62092214411378,4.38599962275997,6.14740322814942,7.38135303182045,5.88811855979556,17.3908794920991,0.660837565967596,1.85115396664481,4.47905326123991,7.19933682767359,3.47942145569652,2.42020229548011,0.889512175379481,2.47293313946327,0.474529061544512,2.9645811850322,0.251335208800269,2.98434708061726,2.14460495831032,1.79763881730844,0.648414149624083,1.39398891278057,3.41402221715547,6.740662243974,3.38123207019241,5.49858585182348,5.43066964069352,5.26018649177389,3.85742876457969,3.98547399544926,2.82597710114475,1.60416313098341,1.48226313543574,2.16898637430922,2.55526693647164,0.899448449539415,2.02860121388503,3.61765739628625,3.05551022137704,1.43848068725405,2.91843408195064,4.3929826110093,7.18841032636773,2.60498663367952,6.24075346229121,7.07220858251913,5.74071723270119,4.3419916922703,3.32555742299888,3.41084541186873,6.51859905768104,7.97801903143384,5.86725620721255,5.02518772325447,2.85652369063216,2.92700471786698,4.88668946729192,4.87222317227305,4.9430978283821,2.13022309130459,1.72684981865896,3.7608755231193,3.01582567878545,1.08781136763742,1.96705709207614,2.20749397043786,5.61927064957272,6.79827782234778,3.11476396215683,6.5642441073137,2.83957397474631,3.90438744296638,3.66219776145758,3.34556317133573,3.7875774594007,3.11384183867716,3.23848561339915,2.04579100537918,2.76701444562566,4.81981974632711,2.98074178937364,4.45164009168138,8.95878276444668,3.29940245945071,1.32745138339963,4.37005145078967,4.83717691143602,4.52652191414155,3.83892460745005,4.30409207121498,3.6179961043551,2.18120237686503,2.85197902707777,3.16036757935816,1.05418608574999,3.09406629744561,2.7235168460303,5.221771726908,2.8458910432206,4.71541477069503,3.90148514013002,3.56737635204141,3.29098041204242,5.48036908406279,2.3467170806371,2.54198485036584,5.07215315526412,3.95727007059552,6.45857706783622,4.70440814439616,5.13301079213487,4.43180429311665,1.1659233465194,4.45020724825223,1.36696704638282,4.54051109519089,2.59272338317596,1.88368457004691,1.36694227721025,1.14389086603261,2.20971958992012,3.07893195112048,4.56059913554598,0.954670618015114,4.11236791655476,3.25311147402958,4.32021363287205,5.22720740036172,3.05707589244649,3.37160865962052,3.55409859618945,1.30877970992015,2.20345454596048,1.86401793926078,1.69107881605257,4.03694674318743,5.62558867554132,4.4723773319131,6.97463046779748,6.08242051766801,7.3935060346825,5.85919731797776,4.71867049915699,5.55643477899814,4.89651010638371,2.52808896502543,4.66267995167378,3.59488350076895,3.50786222040047,3.22248052201467,3.57626438606277,2.28371354087941,1.77227432609493,3.23092639834072,4.19137436602499,2.72230699869469,1.8516997340553,2.30908419936791,2.92192255453922,3.17422537061296,3.99574716073316,2.6017018416748,2.51826924546118,3.67060228661162,2.81523713176773,1.83151624267265,1.92931541171159,3.00943262421218,7.34177395402186,10.5874804396651,12.0308057822273,6.35856774671644,11.6464028361009,6.7985450765073,7.42524750254986,8.55610286126019,8.60970577069989,5.69536342927002,6.33102820263478,3.19219898720825,4.95127456686989,4.132814190161,6.28839487883947,5.33146174505041,5.33392146723877,4.32673620201678,6.09746498224449,3.53776096469316,6.59046179714623,5.65879024158229,4.49479235855436,4.09760975391163,3.96304735793732,1.90517476513229,5.2147946675185,3.47236596834669,10.3021475200827,6.32955356577908,4.80016953339582,5.6792257970988,5.7224685587357,4.50573891560218,4.98779716201252,5.07687647350059,5.12198324043763,8.15516105457313,4.48153575691344,3.92799590160417,3.79632057997357,5.1222330835293,7.7753898202241,6.35241048862461,5.01557188550968,4.49659040288303,5.38042699424439,4.29742108096597,6.31251495827183,4.41182838239031,5.10109238364927 | |phase1_expression=6.08565618998217,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,1.93684985162364,1.40788722151667,2.10658073689794,4.96532107853964,3.11111420081812,4.28001824828014,2.44777126773193,2.6648780945253,1.21485160433896,1.39912375625629,2.5236973228659,2.74228867211478,1.69755860719212,1.9559956734746,1.98581902401771,2.61199789138935,0.799962113967033,1.14704640533585,0,0,0.215471232685889,1.14014051673824,3.2763916868791,1.77384408524244,4.44521471421742,3.69038872550742,0,3.75507105676657,2.49351968037739,2.45003227514843,0.837063261473815,0.7813353445238,0,0,0,0.485510353031154,3.52511090331616,3.64956952390252,3.12029478674859,1.56478268869608,2.61630187656536,2.85592037554813,4.27745777963423,4.19959264876088,5.75010257459886,3.02008690903925,0.725362142011344,3.36093799142464,1.54355661621568,3.15186783932632,4.12537673821954,9.5088736604011,12.6957835025288,11.4089652631112,3.38844532069132,0.889294796111139,0.449949858640699,0,1.4209602298922,0.599200221036809,1.53687322128622,10.8874092923902,11.340498819862,11.9885227970288,7.14127461009509,9.05561017901615,14.5764051065795,11.0222291670972,12.8690630125403,6.60695285996332,8.2996769755372,10.9060638611933,10.1552441552249,11.8019060247108,13.5437476344758,6.42120897703176,6.19038871034848,8.09830713217094,10.0173719061047,10.5355043791336,10.0655700745662,4.08921443999194,3.32514864469856,5.50742528533188,1.72084775396277,2.719885334831,1.61910957491345,3.89865850468601,4.03224198387602,2.66844398250329,2.55645483867087,5.97507810586598,3.88673531961374,3.94361575374705,5.13305909657271,5.09610479413291,14.2213340630666,1.73192832808971,2.53359865475099,2.52762222507392,2.05530983494308,2.33044095282455,1.63286352971307,3.46970653532272,2.74018930480927,2.99800146432876,4.37095657602605,4.58595957829249,1.88499886994513,1.23597483867187,3.7595832799177,1.76922110389975,4.04417124868523,2.87093973998512,2.90925151881133,1.86391761218122,4.9772735491963,5.44561437714983,1.02182822083437,2.99537811264801,2.39961092397363,1.90605340609597,7.63932260964596,4.11750542536764,13.8219787324151,6.43149984711423,4.34716277461562,6.44142938134636,7.30085683804909,6.61955865027056,2.73695335342205,4.54900965180614,3.36706969418358,4.81445638962004,5.9774547152703,5.94205028357652,6.48030716693575,8.84474488967262,8.32739181851524,11.1505052226077,7.24369438069244,3.44908788692548,4.34943984385984,3.51902248327898,6.79506770525482,5.83899223373756,6.268538997399,4.7329891373827,6.96619933864726,1.40442637462647,2.31613116403244,1.42081749697796,2.69263504296152,5.39409937956521,4.14142741360334,3.31442629819294,4.13204886669548,6.78775296704464,4.88321283975857,3.75582761959467,4.67061369468678,3.78487654801005,5.58169377868924,4.62092214411378,4.38599962275997,6.14740322814942,7.38135303182045,5.88811855979556,17.3908794920991,0.660837565967596,1.85115396664481,4.47905326123991,7.19933682767359,3.47942145569652,2.42020229548011,0.889512175379481,2.47293313946327,0.474529061544512,2.9645811850322,0.251335208800269,2.98434708061726,2.14460495831032,1.79763881730844,0.648414149624083,1.39398891278057,3.41402221715547,6.740662243974,3.38123207019241,5.49858585182348,5.43066964069352,5.26018649177389,3.85742876457969,3.98547399544926,2.82597710114475,1.60416313098341,1.48226313543574,2.16898637430922,2.55526693647164,0.899448449539415,2.02860121388503,3.61765739628625,3.05551022137704,1.43848068725405,2.91843408195064,4.3929826110093,7.18841032636773,2.60498663367952,6.24075346229121,7.07220858251913,5.74071723270119,4.3419916922703,3.32555742299888,3.41084541186873,6.51859905768104,7.97801903143384,5.86725620721255,5.02518772325447,2.85652369063216,2.92700471786698,4.88668946729192,4.87222317227305,4.9430978283821,2.13022309130459,1.72684981865896,3.7608755231193,3.01582567878545,1.08781136763742,1.96705709207614,2.20749397043786,5.61927064957272,6.79827782234778,3.11476396215683,6.5642441073137,2.83957397474631,3.90438744296638,3.66219776145758,3.34556317133573,3.7875774594007,3.11384183867716,3.23848561339915,2.04579100537918,2.76701444562566,4.81981974632711,2.98074178937364,4.45164009168138,8.95878276444668,3.29940245945071,1.32745138339963,4.37005145078967,4.83717691143602,4.52652191414155,3.83892460745005,4.30409207121498,3.6179961043551,2.18120237686503,2.85197902707777,3.16036757935816,1.05418608574999,3.09406629744561,2.7235168460303,5.221771726908,2.8458910432206,4.71541477069503,3.90148514013002,3.56737635204141,3.29098041204242,5.48036908406279,2.3467170806371,2.54198485036584,5.07215315526412,3.95727007059552,6.45857706783622,4.70440814439616,5.13301079213487,4.43180429311665,1.1659233465194,4.45020724825223,1.36696704638282,4.54051109519089,2.59272338317596,1.88368457004691,1.36694227721025,1.14389086603261,2.20971958992012,3.07893195112048,4.56059913554598,0.954670618015114,4.11236791655476,3.25311147402958,4.32021363287205,5.22720740036172,3.05707589244649,3.37160865962052,3.55409859618945,1.30877970992015,2.20345454596048,1.86401793926078,1.69107881605257,4.03694674318743,5.62558867554132,4.4723773319131,6.97463046779748,6.08242051766801,7.3935060346825,5.85919731797776,4.71867049915699,5.55643477899814,4.89651010638371,2.52808896502543,4.66267995167378,3.59488350076895,3.50786222040047,3.22248052201467,3.57626438606277,2.28371354087941,1.77227432609493,3.23092639834072,4.19137436602499,2.72230699869469,1.8516997340553,2.30908419936791,2.92192255453922,3.17422537061296,3.99574716073316,2.6017018416748,2.51826924546118,3.67060228661162,2.81523713176773,1.83151624267265,1.92931541171159,3.00943262421218,7.34177395402186,10.5874804396651,12.0308057822273,6.35856774671644,11.6464028361009,6.7985450765073,7.42524750254986,8.55610286126019,8.60970577069989,5.69536342927002,6.33102820263478,3.19219898720825,4.95127456686989,4.132814190161,6.28839487883947,5.33146174505041,5.33392146723877,4.32673620201678,6.09746498224449,3.53776096469316,6.59046179714623,5.65879024158229,4.49479235855436,4.09760975391163,3.96304735793732,1.90517476513229,5.2147946675185,3.47236596834669,10.3021475200827,6.32955356577908,4.80016953339582,5.6792257970988,5.7224685587357,4.50573891560218,4.98779716201252,5.07687647350059,5.12198324043763,8.15516105457313,4.48153575691344,3.92799590160417,3.79632057997357,5.1222330835293,7.7753898202241,6.35241048862461,5.01557188550968,4.49659040288303,5.38042699424439,4.29742108096597,6.31251495827183,4.41182838239031,5.10109238364927 | ||
|short_description=p3@Paip2b | |||
}} | }} |
Latest revision as of 19:37, 1 October 2015
Short description: | p3@Paip2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Paip2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000058383, NM_146169, uc009cok.2_5end |
EntrezGene: | Paip2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.48e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.48e-14 | 23 |
neuron | 9.99e-10 | 33 |
neuronal stem cell | 9.99e-10 | 33 |
neuroblast | 9.99e-10 | 33 |
electrically signaling cell | 9.99e-10 | 33 |
electrically responsive cell | 8.57e-08 | 39 |
electrically active cell | 8.57e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.39e-17 | 64 |
neural plate | 2.39e-17 | 64 |
presumptive neural plate | 2.39e-17 | 64 |
ecto-epithelium | 7.44e-17 | 73 |
regional part of nervous system | 8.28e-17 | 54 |
gray matter | 1.57e-16 | 34 |
pre-chordal neural plate | 7.11e-16 | 49 |
ectoderm-derived structure | 2.99e-15 | 95 |
ectoderm | 2.99e-15 | 95 |
presumptive ectoderm | 2.99e-15 | 95 |
neural tube | 3.16e-15 | 52 |
neural rod | 3.16e-15 | 52 |
future spinal cord | 3.16e-15 | 52 |
neural keel | 3.16e-15 | 52 |
structure with developmental contribution from neural crest | 4.10e-15 | 92 |
central nervous system | 1.79e-14 | 73 |
nervous system | 3.55e-14 | 75 |
brain grey matter | 1.08e-13 | 29 |
regional part of telencephalon | 1.08e-13 | 29 |
telencephalon | 1.08e-13 | 29 |
anterior neural tube | 5.36e-13 | 40 |
brain | 1.21e-12 | 47 |
future brain | 1.21e-12 | 47 |
regional part of brain | 1.49e-12 | 46 |
regional part of forebrain | 1.67e-12 | 39 |
forebrain | 1.67e-12 | 39 |
future forebrain | 1.67e-12 | 39 |
tube | 3.22e-10 | 114 |
cerebral cortex | 3.33e-10 | 21 |
cerebral hemisphere | 3.33e-10 | 21 |
pallium | 3.33e-10 | 21 |
anatomical conduit | 1.46e-09 | 122 |
regional part of cerebral cortex | 5.00e-08 | 17 |