FFCP PHASE1:Mm9::chr6:72283366..72283377,-: Difference between revisions
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|id=chr6:72283366..72283377,-
|short_description=p5@Usp39
|description=CAGE_peak_5_at_Usp39_5end
|association_with_transcript=-4bp_to_ENSMUST00000154799_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=28035 | |EntrezGene=28035 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENSMUST00000154799_5end | |||
|cluster_id=chr6:72283366..72283377,- | |||
|description=CAGE_peak_5_at_Usp39_5end | |||
|id=chr6:72283366..72283377,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.11e-22,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.77e-10!3;DOID:4045!1.77e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.86e-38,3;DOID:4045,8.86e-38,3;DOID:0050686,2.44e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0000010!4.88e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.11e-22,9;UBERON:0002036,2.11e-22,9;UBERON:0002385,2.11e-22,9;UBERON:0000486,2.11e-22,9;UBERON:0007503,2.11e-22,9;UBERON:0001015,2.11e-22,9;UBERON:0002329,2.11e-22,9;UBERON:0003082,2.11e-22,9;UBERON:0003059,2.11e-22,9;UBERON:0007282,2.11e-22,9;UBERON:0004290,2.11e-22,9;UBERON:0009618,2.11e-22,9;UBERON:0000383,3.17e-20,10;UBERON:0007524,1.92e-18,11;UBERON:0003077,1.92e-18,11;UBERON:0007285,1.92e-18,11 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.4409111995798,3.906676722619,10.470474879476,9.41170380849623,10.2456822743767,11.6522484727477,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0,0,0.221730510655305,0,0,0,0,0,0,5.4409111995798,3.906676722619,10.470474879476,9.41170380849623,10.2456822743767,11.6522484727477,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Usp39 | |||
}} | }} |
Latest revision as of 17:24, 1 October 2015
Short description: | p5@Usp39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Usp39_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -4bp_to_ENSMUST00000154799_5end |
EntrezGene: | Usp39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.11e-22 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.11e-22 | 9 |
striated muscle tissue | 2.11e-22 | 9 |
muscle tissue | 2.11e-22 | 9 |
multilaminar epithelium | 2.11e-22 | 9 |
epithelial vesicle | 2.11e-22 | 9 |
musculature | 2.11e-22 | 9 |
somite | 2.11e-22 | 9 |
myotome | 2.11e-22 | 9 |
presomitic mesoderm | 2.11e-22 | 9 |
presumptive segmental plate | 2.11e-22 | 9 |
dermomyotome | 2.11e-22 | 9 |
trunk paraxial mesoderm | 2.11e-22 | 9 |
musculature of body | 3.17e-20 | 10 |
dense mesenchyme tissue | 1.92e-18 | 11 |
paraxial mesoderm | 1.92e-18 | 11 |
presumptive paraxial mesoderm | 1.92e-18 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.86e-38 | 3 |
muscle cancer | 8.86e-38 | 3 |
organ system cancer | 2.44e-19 | 6 |