FFCP PHASE1:Mm9::chr6:56873815..56873920,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:56873815..56873920,-
|short_description=p1@Nt5c3
|description=CAGE_peak_1_at_Nt5c3_5end
|association_with_transcript=0bp_to_ENSMUST00000134577,ENSMUST00000...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107569 | |EntrezGene=107569 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000134577,ENSMUST00000135558,ENSMUST00000138647_5end | |||
|cluster_id=chr6:56873815..56873920,- | |||
|description=CAGE_peak_1_at_Nt5c3_5end | |||
|id=chr6:56873815..56873920,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.31e-10!22;UBERON:0007499!1.31e-10!22;UBERON:0006925!1.31e-10!22;UBERON:0009497!1.31e-10!22;UBERON:0000015!1.31e-10!22;UBERON:0002423!1.31e-10!22;UBERON:0006235!1.31e-10!22;UBERON:0008835!1.31e-10!22;UBERON:0003894!1.31e-10!22;UBERON:0004161!1.31e-10!22;UBERON:0008836!1.31e-10!22;UBERON:0009854!1.75e-09!23;UBERON:0009856!1.75e-09!23;UBERON:0005172!4.59e-09!49;UBERON:0005173!4.59e-09!49;UBERON:0002417!4.59e-09!49;UBERON:0000916!4.59e-09!49;UBERON:0005057!3.96e-08!51;UBERON:0002365!7.88e-08!25;UBERON:0002330!7.88e-08!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-10,22;UBERON:0007499,1.31e-10,22;UBERON:0006925,1.31e-10,22;UBERON:0009497,1.31e-10,22;UBERON:0000015,1.31e-10,22;UBERON:0002423,1.31e-10,22;UBERON:0006235,1.31e-10,22;UBERON:0008835,1.31e-10,22;UBERON:0003894,1.31e-10,22;UBERON:0004161,1.31e-10,22;UBERON:0008836,1.31e-10,22;UBERON:0009854,1.75e-09,23;UBERON:0009856,1.75e-09,23;UBERON:0005172,4.59e-09,49;UBERON:0005173,4.59e-09,49;UBERON:0002417,4.59e-09,49;UBERON:0000916,4.59e-09,49;UBERON:0002365,7.88e-08,25;UBERON:0002330,7.88e-08,25 | |||
|phase1_expression=16.1750335575842,8.72438519098403,5.45999087267443,8.77146212789807,8.01433167914156,15.277013743982,12.8486952327539,31.1187209494199,33.2261384277934,33.4712272640451,36.9830811367091,34.38180052699,33.0417408767227,36.1046261990459,93.9369528320169,128.36931952515,214.765496585341,15.930839350591,15.6310454310542,22.0682618934976,16.1582251287033,14.4964788753293,15.1495877700583,14.3993180514066,16.2880589557691,10.3361753540704,8.18447792702242,12.7128027284675,20.332505881832,21.926621289114,18.6253628950456,38.1018404075779,27.0628506537211,47.5445043046316,23.9746844393558,24.7689621584154,24.2961533952219,36.412251874111,36.7227611926186,42.9289470058515,31.1762688656438,26.6387739133794,29.1306211818692,9.9458486200706,10.1376931219515,8.62669735159903,6.25913075478431,5.01457859675027,6.59058548203415,7.77719596297134,7.55926676776958,5.75010257459886,11.0736519998106,27.5637613964311,19.8295341494054,12.3484529297255,10.601737277734,10.8291139378263,24.4802917640113,17.9856932952491,16.4796164911607,5.42151251310611,8.00365316500025,4.04954872776629,2.96659908770092,3.5524005747305,3.59520132622086,1.92109152660777,22.9154043201736,20.520902626417,23.5563956713548,20.8525218614777,23.8538024227743,20.0884910712525,17.6355666673555,22.9804696652505,24.2254938198655,20.1745994174597,21.3513081226178,15.8263545276233,20.8591827413494,18.7528813400434,23.1721889171146,20.2594539611405,21.8501494320838,20.0347438122094,22.2099822046601,28.8919141029216,17.4170244666323,9.14415877292105,24.3486170509409,47.3233132339763,38.7583660213418,23.746940432064,30.5394916200404,34.9460971935922,20.364440919104,17.0430322578058,17.4056623083922,15.9002808529653,27.323623436676,5.13305909657271,2.54805239706646,0,10.1750789275271,12.4146334082798,17.6933555755174,18.6119723942068,15.018397251536,12.9144660986398,15.0932234286538,17.0500667854799,17.0655467969483,14.9215414147096,14.2282335634203,11.1843266283411,14.3373081285937,10.4111536982336,60.1535175325915,19.2502551437417,47.0392434320638,33.9412677194656,9.31958806090611,15.8101630386235,14.0329293565015,15.5828803677241,25.4008063952551,30.5950392806638,21.9831492836402,18.7238299256028,26.5350349634803,30.2826988592003,26.5951209894183,27.105838477015,19.7398642331582,22.2270530402828,17.1090131268531,33.5898820647251,12.8888606801174,10.3116509384372,11.9710807525687,15.4034409970427,16.2055916824814,18.8381022294644,15.7844678031081,17.6796933993093,16.7726086961915,16.815719098036,12.9340795759705,10.2117283290622,12.1406275673125,11.1789823538063,14.1804097105055,9.05455632957633,14.610531684964,21.6947350832158,27.3863143052162,29.852357225307,26.7113689431857,16.3629360303046,18.2930326785255,13.1445304866541,12.7842157216014,12.199382368339,16.9693824176116,14.1845706297749,18.5108646965737,16.6974439585052,16.785104691175,18.5509234409378,17.99727571918,20.6141982269719,23.4918623361424,20.6677884890973,17.6643556793867,27.5784361176482,8.26046957459495,10.8424732332053,15.5700422890721,12.7730169523241,15.3352278973291,12.1010114774006,9.11749979763968,14.6473732106671,11.8632265386128,11.6936257854048,13.5721012752146,12.5342577385925,12.8676297498619,20.6728463990471,15.7780776408527,11.1519113022446,8.91439134479484,13.1385789501188,16.9061603509621,17.3103628668517,16.8738663835834,18.3755848112635,19.666563045644,24.7985048605732,26.2187875495096,29.7387165051539,24.3091154211462,63.901675489264,84.9134858889037,94.4420872016386,101.227200572863,113.112087923883,105.924354341071,68.4716807132929,47.1813509915353,34.8692994748863,25.8782771749238,18.6070473834252,23.402825483592,21.4692046255045,25.4744327201115,30.8763853672555,12.3784637411625,17.4332098828846,13.6890580211302,14.428332290891,12.2038929110021,10.0503754465089,8.09348379012447,14.8301572371927,15.6058792665129,9.96591103419487,11.4807433433391,11.1427054006702,18.8226630233826,12.2951699794285,9.04747703635634,8.15858525728064,6.88469982226651,7.17435540392304,21.3532284683763,21.8013737061498,15.5738198107842,16.4106102682842,18.9304931649754,12.8844785617891,12.9254038639679,11.9484398976276,10.6943363559549,12.1722908239198,14.9779959619711,16.0740721851222,11.8586333383957,17.3513510867776,19.3038515883245,13.8891170860459,22.6412873501471,12.3727592229402,7.96470830039777,8.98288353773431,12.9999129494843,12.4479352638893,6.79194353625777,11.6825356218692,10.0787034335606,11.9966130727577,8.91243445961803,10.4292130118819,9.48767477174989,6.18813259489121,16.3411010761818,10.9837267359099,7.63216234318252,12.2172109968008,12.5911565886014,11.9507107793387,12.8348236069654,5.48036908406279,9.62154003061212,8.68511490541663,15.4369878638473,10.8824926941377,14.6932628293274,13.3894693340506,12.4147237763262,7.38634048852776,11.0762717919343,19.655082013114,75.5249293126509,22.0833948720648,46.1134373150582,113.021074202815,75.865296385169,104.780403328587,27.026570369023,28.9699506309972,28.7455945513201,13.3653886522116,14.2351197111511,16.4688768372747,17.4968652131318,18.1906817532588,17.9057302271866,14.9699424487151,14.7123151191098,19.6316956488022,8.94343315713371,15.5334828271731,10.7101658349996,29.4547595706638,28.1279433777066,22.9452402245976,26.7360834598903,26.3571555765614,26.8748076498777,33.3323225200512,50.6470633576183,23.1920755992966,18.4339204005034,23.3848229264852,11.149886840959,10.4765176308124,13.1220031207573,14.143108957731,11.3248372225321,15.8657993366359,14.7689527174577,14.4382023425851,14.860327297725,17.5437562138103,16.3729239642784,15.2976828208124,17.4146584250538,17.0047787711409,6.43759264784788,7.08739467214858,6.37961542183498,12.170944424028,16.3283753642528,11.9048555773722,14.1483130192183,17.0534515372024,23.7195773899168,26.2385384809091,32.0821487526062,34.1987832863938,31.5137959094495,30.215755895588,29.0259675099676,32.8734478353681,32.1731110378785,27.4412965228465,7.9916257639816,17.5570944296454,27.8295777379239,27.9572724628538,18.0267319860065,12.1336715577009,20.4466989577486,20.3974706666505,17.0087181083662,16.172621552883,14.7017993936339,16.2218653592026,15.7317732549402,17.3508163017196,19.4131885069973,24.7672719467198,21.3227159738534,16.7831021803423,18.9559514369521,17.2222736557245,20.5721551431249,18.2800080344118,16.4520971063651,18.0229556624087,18.6336573222355,17.4306092256854,18.1098693144045,16.3103221091463,18.1977512553455,18.5176949647054,17.9138877367503,20.0949144046149,17.187703813127,18.9022946246879,19.097754487133,11.9909077410214,19.1823918925235,17.4045553779122,13.1988949127502,18.7502706251588,22.7230478908013 | |phase1_expression=16.1750335575842,8.72438519098403,5.45999087267443,8.77146212789807,8.01433167914156,15.277013743982,12.8486952327539,31.1187209494199,33.2261384277934,33.4712272640451,36.9830811367091,34.38180052699,33.0417408767227,36.1046261990459,93.9369528320169,128.36931952515,214.765496585341,15.930839350591,15.6310454310542,22.0682618934976,16.1582251287033,14.4964788753293,15.1495877700583,14.3993180514066,16.2880589557691,10.3361753540704,8.18447792702242,12.7128027284675,20.332505881832,21.926621289114,18.6253628950456,38.1018404075779,27.0628506537211,47.5445043046316,23.9746844393558,24.7689621584154,24.2961533952219,36.412251874111,36.7227611926186,42.9289470058515,31.1762688656438,26.6387739133794,29.1306211818692,9.9458486200706,10.1376931219515,8.62669735159903,6.25913075478431,5.01457859675027,6.59058548203415,7.77719596297134,7.55926676776958,5.75010257459886,11.0736519998106,27.5637613964311,19.8295341494054,12.3484529297255,10.601737277734,10.8291139378263,24.4802917640113,17.9856932952491,16.4796164911607,5.42151251310611,8.00365316500025,4.04954872776629,2.96659908770092,3.5524005747305,3.59520132622086,1.92109152660777,22.9154043201736,20.520902626417,23.5563956713548,20.8525218614777,23.8538024227743,20.0884910712525,17.6355666673555,22.9804696652505,24.2254938198655,20.1745994174597,21.3513081226178,15.8263545276233,20.8591827413494,18.7528813400434,23.1721889171146,20.2594539611405,21.8501494320838,20.0347438122094,22.2099822046601,28.8919141029216,17.4170244666323,9.14415877292105,24.3486170509409,47.3233132339763,38.7583660213418,23.746940432064,30.5394916200404,34.9460971935922,20.364440919104,17.0430322578058,17.4056623083922,15.9002808529653,27.323623436676,5.13305909657271,2.54805239706646,0,10.1750789275271,12.4146334082798,17.6933555755174,18.6119723942068,15.018397251536,12.9144660986398,15.0932234286538,17.0500667854799,17.0655467969483,14.9215414147096,14.2282335634203,11.1843266283411,14.3373081285937,10.4111536982336,60.1535175325915,19.2502551437417,47.0392434320638,33.9412677194656,9.31958806090611,15.8101630386235,14.0329293565015,15.5828803677241,25.4008063952551,30.5950392806638,21.9831492836402,18.7238299256028,26.5350349634803,30.2826988592003,26.5951209894183,27.105838477015,19.7398642331582,22.2270530402828,17.1090131268531,33.5898820647251,12.8888606801174,10.3116509384372,11.9710807525687,15.4034409970427,16.2055916824814,18.8381022294644,15.7844678031081,17.6796933993093,16.7726086961915,16.815719098036,12.9340795759705,10.2117283290622,12.1406275673125,11.1789823538063,14.1804097105055,9.05455632957633,14.610531684964,21.6947350832158,27.3863143052162,29.852357225307,26.7113689431857,16.3629360303046,18.2930326785255,13.1445304866541,12.7842157216014,12.199382368339,16.9693824176116,14.1845706297749,18.5108646965737,16.6974439585052,16.785104691175,18.5509234409378,17.99727571918,20.6141982269719,23.4918623361424,20.6677884890973,17.6643556793867,27.5784361176482,8.26046957459495,10.8424732332053,15.5700422890721,12.7730169523241,15.3352278973291,12.1010114774006,9.11749979763968,14.6473732106671,11.8632265386128,11.6936257854048,13.5721012752146,12.5342577385925,12.8676297498619,20.6728463990471,15.7780776408527,11.1519113022446,8.91439134479484,13.1385789501188,16.9061603509621,17.3103628668517,16.8738663835834,18.3755848112635,19.666563045644,24.7985048605732,26.2187875495096,29.7387165051539,24.3091154211462,63.901675489264,84.9134858889037,94.4420872016386,101.227200572863,113.112087923883,105.924354341071,68.4716807132929,47.1813509915353,34.8692994748863,25.8782771749238,18.6070473834252,23.402825483592,21.4692046255045,25.4744327201115,30.8763853672555,12.3784637411625,17.4332098828846,13.6890580211302,14.428332290891,12.2038929110021,10.0503754465089,8.09348379012447,14.8301572371927,15.6058792665129,9.96591103419487,11.4807433433391,11.1427054006702,18.8226630233826,12.2951699794285,9.04747703635634,8.15858525728064,6.88469982226651,7.17435540392304,21.3532284683763,21.8013737061498,15.5738198107842,16.4106102682842,18.9304931649754,12.8844785617891,12.9254038639679,11.9484398976276,10.6943363559549,12.1722908239198,14.9779959619711,16.0740721851222,11.8586333383957,17.3513510867776,19.3038515883245,13.8891170860459,22.6412873501471,12.3727592229402,7.96470830039777,8.98288353773431,12.9999129494843,12.4479352638893,6.79194353625777,11.6825356218692,10.0787034335606,11.9966130727577,8.91243445961803,10.4292130118819,9.48767477174989,6.18813259489121,16.3411010761818,10.9837267359099,7.63216234318252,12.2172109968008,12.5911565886014,11.9507107793387,12.8348236069654,5.48036908406279,9.62154003061212,8.68511490541663,15.4369878638473,10.8824926941377,14.6932628293274,13.3894693340506,12.4147237763262,7.38634048852776,11.0762717919343,19.655082013114,75.5249293126509,22.0833948720648,46.1134373150582,113.021074202815,75.865296385169,104.780403328587,27.026570369023,28.9699506309972,28.7455945513201,13.3653886522116,14.2351197111511,16.4688768372747,17.4968652131318,18.1906817532588,17.9057302271866,14.9699424487151,14.7123151191098,19.6316956488022,8.94343315713371,15.5334828271731,10.7101658349996,29.4547595706638,28.1279433777066,22.9452402245976,26.7360834598903,26.3571555765614,26.8748076498777,33.3323225200512,50.6470633576183,23.1920755992966,18.4339204005034,23.3848229264852,11.149886840959,10.4765176308124,13.1220031207573,14.143108957731,11.3248372225321,15.8657993366359,14.7689527174577,14.4382023425851,14.860327297725,17.5437562138103,16.3729239642784,15.2976828208124,17.4146584250538,17.0047787711409,6.43759264784788,7.08739467214858,6.37961542183498,12.170944424028,16.3283753642528,11.9048555773722,14.1483130192183,17.0534515372024,23.7195773899168,26.2385384809091,32.0821487526062,34.1987832863938,31.5137959094495,30.215755895588,29.0259675099676,32.8734478353681,32.1731110378785,27.4412965228465,7.9916257639816,17.5570944296454,27.8295777379239,27.9572724628538,18.0267319860065,12.1336715577009,20.4466989577486,20.3974706666505,17.0087181083662,16.172621552883,14.7017993936339,16.2218653592026,15.7317732549402,17.3508163017196,19.4131885069973,24.7672719467198,21.3227159738534,16.7831021803423,18.9559514369521,17.2222736557245,20.5721551431249,18.2800080344118,16.4520971063651,18.0229556624087,18.6336573222355,17.4306092256854,18.1098693144045,16.3103221091463,18.1977512553455,18.5176949647054,17.9138877367503,20.0949144046149,17.187703813127,18.9022946246879,19.097754487133,11.9909077410214,19.1823918925235,17.4045553779122,13.1988949127502,18.7502706251588,22.7230478908013 | ||
|short_description=p1@Nt5c3 | |||
}} | }} |
Latest revision as of 14:33, 1 October 2015
Short description: | p1@Nt5c3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nt5c3_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000134577, ENSMUST00000135558, ENSMUST00000138647_5end |
EntrezGene: | Nt5c3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-10 | 22 |
epithelial sac | 1.31e-10 | 22 |
digestive gland | 1.31e-10 | 22 |
epithelium of foregut-midgut junction | 1.31e-10 | 22 |
anatomical boundary | 1.31e-10 | 22 |
hepatobiliary system | 1.31e-10 | 22 |
foregut-midgut junction | 1.31e-10 | 22 |
hepatic diverticulum | 1.31e-10 | 22 |
liver primordium | 1.31e-10 | 22 |
septum transversum | 1.31e-10 | 22 |
liver bud | 1.31e-10 | 22 |
digestive tract diverticulum | 1.75e-09 | 23 |
sac | 1.75e-09 | 23 |
abdomen element | 4.59e-09 | 49 |
abdominal segment element | 4.59e-09 | 49 |
abdominal segment of trunk | 4.59e-09 | 49 |
abdomen | 4.59e-09 | 49 |
exocrine gland | 7.88e-08 | 25 |
exocrine system | 7.88e-08 | 25 |