FFCP PHASE1:Mm9::chr6:56873798..56873809,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:56873798..56873809,-
|short_description=p4@Nt5c3
|description=CAGE_peak_4_at_Nt5c3_5end
|association_with_transcript=3bp_to_ENSMUST00000152447_5end
|Entre...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=107569 | |EntrezGene=107569 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENSMUST00000152447_5end | |||
|cluster_id=chr6:56873798..56873809,- | |||
|description=CAGE_peak_4_at_Nt5c3_5end | |||
|id=chr6:56873798..56873809,- | |||
|ontology_enrichment_celltype=CL:0000988!2.26e-08!32;CL:0002032!2.26e-08!32;CL:0000037!2.26e-08!32;CL:0000566!2.26e-08!32;CL:0000837!2.26e-08!32;CL:0002031!7.58e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.26e-15,32;CL:0002032,4.26e-15,32;CL:0000037,4.26e-15,32;CL:0000837,4.26e-15,32;CL:0002031,2.65e-11,25;CL:0002320,9.07e-11,46;CL:0000134,9.07e-11,46;CL:0000034,1.05e-09,97;CL:0000084,3.81e-09,11;CL:0000827,3.81e-09,11;CL:0000791,4.70e-09,9;CL:0000789,4.70e-09,9;CL:0002420,4.70e-09,9;CL:0002419,4.70e-09,9;CL:0000790,4.70e-09,9;CL:0000049,7.63e-09,19;CL:0000723,1.33e-08,91;CL:0000048,1.33e-08,91;CL:0000219,2.84e-08,54;CL:0000838,3.21e-08,12;CL:0000624,8.00e-08,8;CL:0000542,1.94e-07,13;CL:0000051,1.94e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.07e-11,46 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,1.29123323441576,2.53419699873,1.17032263160997,0.856089841127525,1.43589886191606,1.36960583944965,1.31130603628496,3.66420737997229,3.64455481301687,6.99561878128147,1.26184866143295,0.685572168028694,0.42438965179803,0.595303031057488,0.695036658406197,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.76421090831952,0.665191531965914,1.27006134691926,1.23012957516914,0,0.577703239502549,0.997407872150954,0,1.25559489221072,2.3440060335714,1.57057123192139,0,3.41522742479223,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.335565212115473,2.17608642603403,1.68046899571232,0.514518872071894,0.286533439938757,1.54701627683233,1.01158230429799,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.47227472945967,0.285650984403804,0.220868540951614,0.857435594504678,0.479227355091182,0,0,0.255374676170375,0.307213066512487,1.45074916503213,0.274462930807229,1.56274011167028,0,0,0.45839474333043,1.47314292736834,0.711858403995515,1.1183966749518,0.37863096666592,0.0755715601067855,0,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,0.340860645156116,0,1.41335829804136,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,0.34255163915718,0.776813650941515,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,0.662524555381181,1.45462575940567,0,0.292780797011547,0.209446706813455,1.02182822083437,1.43778149407104,1.19980546198682,2.28726408731516,0.149790639404823,0,1.25654352112864,0.347648640384553,0,0.83115217823824,0.811206315338788,0.203678727700633,1.49288364732112,0,0,0.390361328888111,0.689706313300419,0.720248519221397,0.60281927134286,0.476255494059295,0.2562274405697,0.374806898238915,0.258703370739016,0.646703978798527,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,1.54408744268829,2.27330799516474,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,1.07986979021165,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,1.02904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.505892296994058,0.147610147979602,0.470996183524124,0.616985819609003,0,2.8363667971736,2.55526693647164,4.27238013531222,2.43432145666204,4.3411888755435,4.32863948028414,1.72617682470486,1.62135226775035,0.823684239564244,1.43768206527355,0,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.184753190166605,1.13694847062291,0.325929952884052,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.578596234326046,1.50791283939272,0.54390568381871,0,0.551873492609465,0.481651769963376,0.586058432961016,0.163934945376675,0,0.315508219416257,0.780877488593277,0,0.477937595905104,0.222798674082394,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.906970670894253,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.358117032009409,0.328281799490123,0,0.741701208042039,1.36696704638282,0.412773735926445,1.11116716421827,3.57900068308913,1.91371918809435,2.97411625168479,1.01987057996313,1.25956307091292,1.52019971184866,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0.598066184175915,0.66183396182839,0.583353565032143,0.904118764344118,0.506868376472335,0.352071715937262,0.911430693907651,2.41176492179135,1.44950472495604,0.288030006257865,0,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.908698049533329,0.762068066549998,0.504130925684203,0.38983152295901,0.288635524920988,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0.972426868273176,1.04806581313991,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.842773567228942,0.832326981263301,0.516919220600519,0.952587382566147,0.927074607558844,1.35036454324594,0.824171801606613,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.593175090620871,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.661774257358546,0.695603506861264 | |phase1_expression=0.320297694209588,0,0.454999239389536,0.30246421130683,0,0,0.233612640595526,1.29123323441576,2.53419699873,1.17032263160997,0.856089841127525,1.43589886191606,1.36960583944965,1.31130603628496,3.66420737997229,3.64455481301687,6.99561878128147,1.26184866143295,0.685572168028694,0.42438965179803,0.595303031057488,0.695036658406197,1.56719873483361,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.570070258369122,1.76421090831952,0.665191531965914,1.27006134691926,1.23012957516914,0,0.577703239502549,0.997407872150954,0,1.25559489221072,2.3440060335714,1.57057123192139,0,3.41522742479223,0.485510353031154,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0.335565212115473,2.17608642603403,1.68046899571232,0.514518872071894,0.286533439938757,1.54701627683233,1.01158230429799,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,1.47227472945967,0.285650984403804,0.220868540951614,0.857435594504678,0.479227355091182,0,0,0.255374676170375,0.307213066512487,1.45074916503213,0.274462930807229,1.56274011167028,0,0,0.45839474333043,1.47314292736834,0.711858403995515,1.1183966749518,0.37863096666592,0.0755715601067855,0,0,0,1.07940638327563,0.649776417447669,0,0.561777680527007,0.340860645156116,0,1.41335829804136,0.14084341977668,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,0.34255163915718,0.776813650941515,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.289198713839823,0.884610551949874,0.485300549842228,0.662524555381181,1.45462575940567,0,0.292780797011547,0.209446706813455,1.02182822083437,1.43778149407104,1.19980546198682,2.28726408731516,0.149790639404823,0,1.25654352112864,0.347648640384553,0,0.83115217823824,0.811206315338788,0.203678727700633,1.49288364732112,0,0,0.390361328888111,0.689706313300419,0.720248519221397,0.60281927134286,0.476255494059295,0.2562274405697,0.374806898238915,0.258703370739016,0.646703978798527,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,1.54408744268829,2.27330799516474,0.207125772535502,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,1.07986979021165,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0.420579897128254,1.02904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0,0.474529061544512,0.494096864172033,0,0.397912944082302,0,0,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0,0.210407459670956,0.505892296994058,0.147610147979602,0.470996183524124,0.616985819609003,0,2.8363667971736,2.55526693647164,4.27238013531222,2.43432145666204,4.3411888755435,4.32863948028414,1.72617682470486,1.62135226775035,0.823684239564244,1.43768206527355,0,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0.184753190166605,1.13694847062291,0.325929952884052,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0.578596234326046,1.50791283939272,0.54390568381871,0,0.551873492609465,0.481651769963376,0.586058432961016,0.163934945376675,0,0.315508219416257,0.780877488593277,0,0.477937595905104,0.222798674082394,0.566153061577665,0,0.584511715822624,0.790575555893047,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.906970670894253,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.21183207086382,0.220528398054962,0,0,0.120625849856312,0.358117032009409,0.328281799490123,0,0.741701208042039,1.36696704638282,0.412773735926445,1.11116716421827,3.57900068308913,1.91371918809435,2.97411625168479,1.01987057996313,1.25956307091292,1.52019971184866,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0.598066184175915,0.66183396182839,0.583353565032143,0.904118764344118,0.506868376472335,0.352071715937262,0.911430693907651,2.41176492179135,1.44950472495604,0.288030006257865,0,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.993406773906324,0.360586348559907,0.590758108698309,0.908698049533329,0.762068066549998,0.504130925684203,0.38983152295901,0.288635524920988,0.818138315270983,0,0.443971906748129,0.0897138566094757,0.167884616364078,0,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0,0.51776031175182,0.207574695168353,0,0.341467211508268,0.972426868273176,1.04806581313991,0.367687016900028,0.44449345560323,0.824140228955577,0.320919209591815,0.252697211763798,0.760437899670719,0.188626341386076,0.842773567228942,0.832326981263301,0.516919220600519,0.952587382566147,0.927074607558844,1.35036454324594,0.824171801606613,0.735994600671987,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.658765662907314,0.507687647350059,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.593175090620871,0.0985044823755635,0.818462086339379,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.661774257358546,0.695603506861264 | ||
|short_description=p4@Nt5c3 | |||
}} | }} |
Latest revision as of 14:33, 1 October 2015
Short description: | p4@Nt5c3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nt5c3_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 3bp_to_ENSMUST00000152447_5end |
EntrezGene: | Nt5c3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.26e-15 | 32 |
hematopoietic oligopotent progenitor cell | 4.26e-15 | 32 |
hematopoietic stem cell | 4.26e-15 | 32 |
hematopoietic multipotent progenitor cell | 4.26e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 2.65e-11 | 25 |
connective tissue cell | 9.07e-11 | 46 |
mesenchymal cell | 9.07e-11 | 46 |
stem cell | 1.05e-09 | 97 |
T cell | 3.81e-09 | 11 |
pro-T cell | 3.81e-09 | 11 |
mature alpha-beta T cell | 4.70e-09 | 9 |
alpha-beta T cell | 4.70e-09 | 9 |
immature T cell | 4.70e-09 | 9 |
mature T cell | 4.70e-09 | 9 |
immature alpha-beta T cell | 4.70e-09 | 9 |
common myeloid progenitor | 7.63e-09 | 19 |
somatic stem cell | 1.33e-08 | 91 |
multi fate stem cell | 1.33e-08 | 91 |
motile cell | 2.84e-08 | 54 |
lymphoid lineage restricted progenitor cell | 3.21e-08 | 12 |
CD4-positive, alpha-beta T cell | 8.00e-08 | 8 |
lymphocyte | 1.94e-07 | 13 |
common lymphoid progenitor | 1.94e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.07e-11 | 46 |