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FFCP PHASE1:Mm9::chr6:28371680..28371741,-: Difference between revisions

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(Created page with "{{FFCP |id=chr6:28371680..28371741,- |short_description=p1@Gcc1 |description=CAGE_peak_1_at_Gcc1_5end |association_with_transcript=0bp_to_ENSMUST00000090511,NM_028900,uc00...")
 
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{{FFCP
{{FFCP
|id=chr6:28371680..28371741,-
|DHSsupport=NA
|short_description=p1@Gcc1
|DPIdataset=NA
|description=CAGE_peak_1_at_Gcc1_5end
|association_with_transcript=0bp_to_ENSMUST00000090511,NM_028900,uc009bco.2_5end
|EntrezGene=74375
|EntrezGene=74375
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9D4H2
|UniProt=Q9D4H2
|association_with_transcript=0bp_to_ENSMUST00000090511,NM_028900,uc009bco.2_5end
|cluster_id=chr6:28371680..28371741,-
|description=CAGE_peak_1_at_Gcc1_5end
|id=chr6:28371680..28371741,-
|ontology_enrichment_celltype=CL:0000117!6.27e-08!23;CL:0000337!6.27e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-08,23;CL:0000337,6.27e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.66e-14,52;UBERON:0005068,4.66e-14,52;UBERON:0006241,4.66e-14,52;UBERON:0007135,4.66e-14,52;UBERON:0000073,1.09e-13,54;UBERON:0002346,1.61e-13,64;UBERON:0003075,1.61e-13,64;UBERON:0007284,1.61e-13,64;UBERON:0001017,2.03e-13,73;UBERON:0010371,2.49e-13,73;UBERON:0000955,2.76e-13,47;UBERON:0006238,2.76e-13,47;UBERON:0002616,5.29e-13,46;UBERON:0004121,6.83e-13,95;UBERON:0000924,6.83e-13,95;UBERON:0006601,6.83e-13,95;UBERON:0001016,1.33e-12,75;UBERON:0003056,8.69e-12,49;UBERON:0003080,3.06e-11,40;UBERON:0002780,7.94e-11,39;UBERON:0001890,7.94e-11,39;UBERON:0006240,7.94e-11,39;UBERON:0010314,6.01e-10,92;UBERON:0002020,2.83e-08,34;UBERON:0003528,1.10e-07,29;UBERON:0002791,1.10e-07,29;UBERON:0001893,1.10e-07,29
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|phase1_expression=7.20669811971573,4.53668029931169,0.909998478779072,1.20985684522732,1.50268718983904,3.18970616632591,3.50418960893289,12.2667157269497,1.68946466582,1.40438715793196,5.99262888789267,6.78063351460359,11.8128503652532,13.8998439846206,1.66554880907831,3.23960427823721,1.39912375625629,7.88655413395594,10.6949258212476,11.4585205985468,9.26971862646661,6.25532992565577,3.91799683708403,1.75991665072747,2.98232065387321,5.16808767703518,2.15380998079537,1.29282739611533,1.90023419456374,4.03248207615889,1.55211357458713,3.17515336729816,1.84519436275371,0,4.04392267651784,5.31950865147176,4.08338712524738,12.9744805528441,10.1573594788094,11.5175223674236,23.5292595212406,18.442228093878,15.5363312969969,2.64383317748712,1.62203089951223,1.83546752161682,6.25913075478431,5.45062890951116,6.37089929929968,8.1660557611199,6.01941612989059,5.75010257459886,10.2347389695219,11.6057942721815,7.05796978199174,2.82985379639542,4.01146815914259,3.09403255366465,11.3297218081375,11.1088105647127,8.87363964908651,5.08266798103698,5.33576877666684,6.74924787961049,7.9109309005358,4.9733608046227,4.49400165777607,2.30530983192933,9.53944433237994,10.8004750665353,10.9368979902719,5.42736870367227,7.50953039235486,9.79926393719632,11.2139201091337,11.0306254393203,3.30347642998166,7.2781782708557,9.83081812839958,8.96826756565318,11.4359554503012,8.33461392890816,4.74611098302348,9.56696437053856,7.79271063661732,7.07108605136802,6.40672563595963,7.45597783301202,3.3319525066601,4.60986516651392,7.53647670624362,4.30211938490693,0,0.539703191637817,1.94932925234301,1.79210754838934,5.75822122540183,2.89731548382698,1.55871602761721,3.88673531961374,7.46470124816407,0,0,0,3.46385665617943,3.80039798212648,2.52762222507392,3.4255163915718,5.43769555659061,5.78924342352817,3.99016251562112,4.56698217468212,5.30415643688935,5.87818298155228,6.70255630673517,8.04266184509923,5.43828929015623,4.77177877835708,3.5384422077995,5.82360659810673,6.40440403535141,2.42437626567611,5.59175283654366,11.7112318804619,9.42510180660548,5.10914110417183,3.95389910869537,1.79970819298022,2.92261522268049,8.68785708547972,8.6925114535539,7.413606774659,6.43149984711423,8.43861009190091,7.2725815595846,7.62533936418461,6.61955865027056,4.97627882440372,0.758168275301024,3.57751155007006,4.94457683258274,5.9774547152703,6.66229880279792,5.57607825992146,9.25296388458059,7.68682321709099,9.37017245597288,7.24369438069244,8.40715172438085,5.29497024469894,4.39877810409872,5.2606975782618,4.44875598760957,3.83077383174383,5.35033554660653,3.58261680273288,1.40442637462647,2.05878325691772,3.6941254921427,3.52113813310353,4.22146907965973,4.68161359798639,3.31442629819294,4.52557733019029,4.16521204795921,3.72054311600653,4.82892122519315,5.7215017759913,6.7469538464527,5.91002870684743,7.21512404958116,5.26319954731196,5.04965265169416,7.1129401942997,6.72927835405207,9.2614151141356,3.63460661282178,2.90895623329899,5.54549451391608,4.41249676534833,3.09281907173024,2.8235693447268,2.89091456998331,3.80451252225118,4.74529061544512,3.95277491337626,4.77536896720512,3.78017296878187,5.06906626509712,2.69645822596266,3.45820879799511,4.38110801159608,3.22435431620239,4.91268604221834,6.76246414038483,3.66572390121566,5.43066964069352,4.9095073923223,8.47369597465048,6.4948465111025,5.65195420228949,7.15703550746443,0.592905254174298,1.33476084572875,1.57247196090562,2.9232074610031,3.44862206360455,2.17059443777175,4.32863948028414,2.5892652370573,2.10775794807546,1.37280706594041,4.31304619582064,3.34926852901653,4.05648975048929,1.51547326768267,1.79397413521912,0.964887042726734,8.86815312799702,4.16881105895066,3.91115943460862,5.43184274480602,5.86725620721255,6.19773152534718,4.76087281772027,6.82967767502296,5.04432461139811,8.41565820665345,8.13219320153184,8.35702905050264,8.46156411142888,8.67894351489069,3.01582567878545,3.26343410291226,5.90117127622843,9.10591262805617,10.1146871692309,7.501547941901,2.13115428989678,7.82659874333556,4.73262329124385,3.12350995437311,4.95473814785438,4.77937595905104,5.79276552614225,4.24614796183249,4.85772842009873,7.01414058987149,6.7198922250909,7.71171159412337,4.9679029822894,8.54714897602825,6.67836533349662,4.28922319728592,3.98235415019888,5.09839335925461,5.74414758233027,3.39489143560617,2.95301892880773,5.84126781093462,3.35956781118687,6.5436071305951,3.56497378384721,4.42451461110142,6.32511651449993,5.15677716240934,8.5109901438447,7.74262704334634,7.50280365939976,9.43082954139006,8.33499098118686,6.95638388648075,8.39200005070817,9.74287837166718,1.17335854031855,8.26145076368899,8.38007912608855,6.92522262354216,5.65125493435669,4.76472106932431,3.81991500810037,3.28281799490123,7.28702091574627,8.52956389248344,4.95525554313773,7.01715351074956,4.25947412950337,3.39063222608444,3.8274383761887,6.40578884978263,6.79913719975421,6.01791244991729,7.04819866402561,4.77335309007557,4.11236791655476,4.47302827679067,3.67218158794124,2.09088296014469,4.58561383866973,3.64133735239016,3.80205896336545,3.92633912976044,4.92536898508813,4.34937519160848,24.2387963634202,5.23307911153926,7.1147150896552,4.86127970860119,6.97463046779748,5.91346439217724,7.74557775061976,6.77062801188541,8.28388820963116,12.3207901621263,18.4339204005034,9.16432249821717,8.10900861160657,6.05994647272481,6.10627867995637,5.72885426135941,8.14593554603186,9.01465871399766,7.97523446742717,9.28891339522958,10.287918898425,9.67931377313669,8.57629350509821,9.33254863911196,10.9864288050675,4.53460767230423,5.10567692760349,4.48569283047379,4.53288464183012,6.76163579112667,2.62755465631655,5.49454872801795,4.71610433973945,7.02200945649509,7.90652579663893,3.68260189205742,8.59343270159095,5.67115501734169,5.48066015816514,6.7985450765073,9.45031500324528,8.10578165803597,4.07828168085784,6.21312374102184,6.43481555021895,6.78342284781753,5.9756762013947,4.61902762429759,5.03071590307158,4.04455718590031,4.22268782823069,3.09052585858341,4.49286893428541,4.54854981174835,3.8021894983536,4.52703219326583,4.775716880964,4.73786127796033,4.47996657853783,4.76293691283074,3.47652977834566,4.24400285020151,1.64834360321323,3.82717192349433,5.14303878578123,3.72699192934609,5.24559617884106,4.65108533223451,4.32903149910521,5.16149108139227,5.3049112133104,3.41990624869196,5.56796866768033,5.61142271657738,3.55905054372522,5.1222330835293,6.54769669071503,4.64810523557898,3.66522560864169,5.74564329257276,3.27504251823572,4.51229213501426,7.07766828654721,4.19123696327079,4.86922454802885
|short_description=p1@Gcc1
}}
}}

Latest revision as of 00:29, 27 September 2015

Short description:p1@Gcc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gcc1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000090511, NM_028900, uc009bco.2_5end
EntrezGene:Gcc1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Gcc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.78
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G923.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C16.70
adrenal gland, neonate N25.CNhs11223.1377-27I38.04
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A48.69
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G89.37
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G15.91
heart, neonate N16.CNhs11209.782-15G17.22
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D27.11
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G19.26
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H17.16
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E55.04
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H78.55
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F58.39
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F88.38
skin, adult.CNhs10492.30-1C36.93
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G524.24
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B77.75
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D98.28
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E218.43
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I26.06
thymus, embryo E16.CNhs11002.456-26C56.11
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F89.01
thymus, neonate N03.CNhs11137.2104-43C77.98
thymus, neonate N06.CNhs11197.681-26C49.29
thymus, neonate N07.CNhs11211.713-19D310.29
thymus, neonate N10.CNhs11194.748-24E49.68
thymus, neonate N20.CNhs11186.820-7A28.58
thymus, neonate N25.CNhs11125.1362-25G79.33
thymus, neonate N30.CNhs11132.1393-42G210.99
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.27e-0823
neuroblast (sensu Vertebrata)6.27e-0823

Uber anatomy
Ontology termp-valuen
neural tube4.66e-1452
neural rod4.66e-1452
future spinal cord4.66e-1452
neural keel4.66e-1452
regional part of nervous system1.09e-1354
neurectoderm1.61e-1364
neural plate1.61e-1364
presumptive neural plate1.61e-1364
central nervous system2.03e-1373
ecto-epithelium2.49e-1373
brain2.76e-1347
future brain2.76e-1347
regional part of brain5.29e-1346
ectoderm-derived structure6.83e-1395
ectoderm6.83e-1395
presumptive ectoderm6.83e-1395
nervous system1.33e-1275
pre-chordal neural plate8.69e-1249
anterior neural tube3.06e-1140
regional part of forebrain7.94e-1139
forebrain7.94e-1139
future forebrain7.94e-1139
structure with developmental contribution from neural crest6.01e-1092
gray matter2.83e-0834
brain grey matter1.10e-0729
regional part of telencephalon1.10e-0729
telencephalon1.10e-0729
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