FFCP PHASE1:Mm9::chr6:124707015..124707026,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:124707015..124707026,-
|short_description=p11@Atn1
|description=CAGE_peak_11_at_Atn1_5end
|association_with_transcript=-473bp_to_ENSMUST00000088357_5end
|...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13498 | |EntrezGene=13498 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35126 | |UniProt=O35126 | ||
|association_with_transcript=-473bp_to_ENSMUST00000088357_5end | |||
|cluster_id=chr6:124707015..124707026,- | |||
|description=CAGE_peak_11_at_Atn1_5end | |||
|id=chr6:124707015..124707026,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!5.09e-12!50;UBERON:0006238!5.09e-12!50;UBERON:0002616!1.68e-11!49;UBERON:0000033!3.71e-11!63;UBERON:0001049!1.03e-09!52;UBERON:0005068!1.03e-09!52;UBERON:0006241!1.03e-09!52;UBERON:0007135!1.03e-09!52;UBERON:0001017!1.04e-09!73;UBERON:0005743!1.04e-09!73;UBERON:0004121!1.05e-09!102;UBERON:0000924!1.05e-09!102;UBERON:0006601!1.05e-09!102;UBERON:0003080!1.72e-09!40;UBERON:0002780!3.26e-09!39;UBERON:0001890!3.26e-09!39;UBERON:0006240!3.26e-09!39;UBERON:0000073!3.27e-09!75;UBERON:0001016!3.27e-09!75;UBERON:0003056!2.19e-08!49;UBERON:0000153!3.47e-08!94;UBERON:0002346!9.47e-08!71;UBERON:0003075!9.47e-08!71;UBERON:0007284!9.47e-08!71;UBERON:0002791!1.19e-07!29;UBERON:0003528!1.19e-07!29;UBERON:0001893!1.19e-07!29;UBERON:0002020!1.35e-07!34;UBERON:0007811!3.65e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.21e-12,47;UBERON:0006238,3.21e-12,47;UBERON:0002616,1.59e-11,46;UBERON:0001017,2.28e-11,73;UBERON:0000073,5.00e-11,54;UBERON:0001016,1.05e-10,75;UBERON:0004121,1.40e-10,95;UBERON:0000924,1.40e-10,95;UBERON:0006601,1.40e-10,95;UBERON:0003080,2.52e-10,40;UBERON:0002780,6.24e-10,39;UBERON:0001890,6.24e-10,39;UBERON:0006240,6.24e-10,39;UBERON:0010371,1.22e-09,73;UBERON:0003528,1.78e-09,29;UBERON:0002791,1.78e-09,29;UBERON:0001893,1.78e-09,29;UBERON:0001049,4.96e-09,52;UBERON:0005068,4.96e-09,52;UBERON:0006241,4.96e-09,52;UBERON:0007135,4.96e-09,52;UBERON:0003056,3.13e-08,49;UBERON:0002346,2.78e-07,64;UBERON:0003075,2.78e-07,64;UBERON:0007284,2.78e-07,64;UBERON:0002020,4.30e-07,34 | |||
|phase1_expression=1.44133962394315,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.437102012094987,0,0,0,0.315462165358238,0,0,0.340173160604279,0.397163804803541,0,0,0,0,0.430761996159075,0.646413698057667,0,0,0,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0,1.25896817975577,0.811015449756117,1.10128051297009,11.7358701652206,1.09012578190223,1.75748946187577,1.74986909166855,1.53985063787899,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,0,1.35537812827653,1.77858959222228,0.899899717281399,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,2.38486108309499,1.08004750665353,1.47227472945967,0.856952953211411,0.883474163806454,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,1.91531007127782,2.15049146558741,1.18697658957174,0.914876436024097,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.29893002301434,2.82671659608272,1.12674735821344,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.940709657085638,0.879666139307728,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,0.41889341362691,0,0.239630249011841,0,0.381210681219194,1.19832511523858,1.37250180845588,1.7591609295801,2.08589184230732,1.02286182932132,1.24672826735736,0.973447578406546,0.916554274652847,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0,0.720248519221397,0.90422890701429,1.15662048557257,1.2811372028485,0.843315521037559,0.517406741478031,1.72454394346274,2.83659120251729,1.75951124163949,1.53437012699302,1.39023624612799,0,1.02891068203972,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0.473489471170421,0,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.493679549740441,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,1.26173969138476,1.9551876352064,0,0.528901133327089,0.213288250535234,0.928946687441754,0.77320476793256,0.80673409849337,0.22237804384487,0.570676878337677,0,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.561086559122548,0.758838445491087,1.32849133181642,0.627994911365499,0.370191491765402,0.889357881261447,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,1.62964976442026,0.848725428875941,2.58159273117352,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.221464689648775,1.11618338060241,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0.491764273019036,1.10374698521893,0.321101179975584,1.87538698547525,1.63934945376675,0,0,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.99358059645788,1.06839362200353,0.325773918707152,0.989820737835213,0,1.21390318077491,1.209294227859,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0,1.05418608574999,0,1.36175842301515,0.540183282093931,0.517434735131018,0.857348140126369,0.532020700926821,1.96205699362278,1.81003922662333,2.13125464380219,0.938686832254841,0.21183207086382,0.882113592219848,1.81374878235628,0.968786560175433,2.11095237248546,1.3130957840345,1.31312719796049,0.582961673259701,0.18542530201051,0.512612642393558,1.03193433981611,1.11116716421827,0,0,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,1.26534397432454,0.609958401380546,0.540026704109006,0.627264888043406,0.655087691238533,0.944050424693745,0.909188012978695,0,0.259229946583586,0.621339313086926,0.56369293868419,1.04661582230785,0.992750942742586,1.55560950675238,0.904118764344118,0.168956125490778,0.821500670520278,1.0416350787516,0.943734099831398,0.241584120826006,0,0.632022241256357,0.608175645870493,0.513554785824136,0.389762468933385,0.716106782669926,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0,0.302478555410522,0.38983152295901,0,0.116876902181569,0.453460767230423,0.221985953374065,1.52513556236109,0.167884616364078,0.965947970160952,0.187682475451182,1.09890974560359,1.2862102744744,0.501572104035363,0.564751842617067,0.920650473014354,1.71868654031819,1.71853182343688,3.42541259885321,0,0,0.45032120322422,0.453142408984205,3.10656187051092,1.03787347584177,1.19707462020309,1.02440163452481,1.94485373654635,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,0,0.565879024158229,1.12369808963859,1.47257850531199,1.03383844120104,0.476293691283074,1.62238056322798,1.35036454324594,1.64834360321323,1.91358596174717,0.685738504770831,0.177475806159338,1.66905332963125,1.30811774969096,0.846984423737976,1.09998990259179,1.28049581010941,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,1.0835493061312,0,0.154936841185966,0.964533054905707,2.24829520144151,0.467863216890817,1.07435527024149,0.57386499620653,1.98532277207564,0.695603506861264 | |phase1_expression=1.44133962394315,0,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.342401459862411,0.437102012094987,0,0,0,0.315462165358238,0,0,0.340173160604279,0.397163804803541,0,0,0,0,0.430761996159075,0.646413698057667,0,0,0,1.27006134691926,1.23012957516914,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0,0.523523743973798,0,0,0,1.25896817975577,0.811015449756117,1.10128051297009,11.7358701652206,1.09012578190223,1.75748946187577,1.74986909166855,1.53985063787899,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,0,1.35537812827653,1.77858959222228,0.899899717281399,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,2.38486108309499,1.08004750665353,1.47227472945967,0.856952953211411,0.883474163806454,1.22490799214954,1.43768206527355,0.919218786610021,1.10115880999389,1.91531007127782,2.15049146558741,1.18697658957174,0.914876436024097,1.56274011167028,1.95428099300967,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.421333260395256,1.36344258062446,1.29893002301434,2.82671659608272,1.12674735821344,2.56652954828636,5.09610479413291,7.11066703153331,0.216491041011214,0.506719730950197,0,0.11418387971906,0,0.890652834388949,0.867426633830679,0.304465478312141,0.461230994512117,0.452167921657868,0.940709657085638,0.879666139307728,0,0.289198713839823,0,0.970601099684455,1.10420759230197,0.969750506270444,0,1.17112318804619,0.41889341362691,0,0.239630249011841,0,0.381210681219194,1.19832511523858,1.37250180845588,1.7591609295801,2.08589184230732,1.02286182932132,1.24672826735736,0.973447578406546,0.916554274652847,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0,0.720248519221397,0.90422890701429,1.15662048557257,1.2811372028485,0.843315521037559,0.517406741478031,1.72454394346274,2.83659120251729,1.75951124163949,1.53437012699302,1.39023624612799,0,1.02891068203972,0.398068533636986,0,0,0,0,0.703578179943289,0.36012412292203,0.473489471170421,0,0.462801338662135,0.465067889500816,0.804820204198858,0.350296027101508,0.493679549740441,0.32833492815819,0.405344047729279,0.292399974850665,0.439100230582101,0.268412837520744,1.26173969138476,1.9551876352064,0,0.528901133327089,0.213288250535234,0.928946687441754,0.77320476793256,0.80673409849337,0.22237804384487,0.570676878337677,0,0.988193728344065,1.00534083520108,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.796565093017469,0.758671603812327,0.456994050438915,0,0.407302655690628,0.193952487167626,0.561086559122548,0.758838445491087,1.32849133181642,0.627994911365499,0.370191491765402,0.889357881261447,0,0.589676985339609,0.224862112384854,0.405720242777006,0.72353147925725,0,0,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,1.62964976442026,0.848725428875941,2.58159273117352,0.670025029767263,0.952174563544055,0.975668239288994,0.788175720530955,0.221464689648775,1.11618338060241,0.491589944147214,0.345369963731791,1.01254341007058,0,0,0.491764273019036,1.10374698521893,0.321101179975584,1.87538698547525,1.63934945376675,0,0,1.17131623288992,0.215423397732799,1.43381278771531,0.222798674082394,0.283076530788832,0,1.16902343164525,0.395287777946524,1.92792789853084,0.99358059645788,1.06839362200353,0.325773918707152,0.989820737835213,0,1.21390318077491,1.209294227859,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0,1.05418608574999,0,1.36175842301515,0.540183282093931,0.517434735131018,0.857348140126369,0.532020700926821,1.96205699362278,1.81003922662333,2.13125464380219,0.938686832254841,0.21183207086382,0.882113592219848,1.81374878235628,0.968786560175433,2.11095237248546,1.3130957840345,1.31312719796049,0.582961673259701,0.18542530201051,0.512612642393558,1.03193433981611,1.11116716421827,0,0,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,1.26534397432454,0.609958401380546,0.540026704109006,0.627264888043406,0.655087691238533,0.944050424693745,0.909188012978695,0,0.259229946583586,0.621339313086926,0.56369293868419,1.04661582230785,0.992750942742586,1.55560950675238,0.904118764344118,0.168956125490778,0.821500670520278,1.0416350787516,0.943734099831398,0.241584120826006,0,0.632022241256357,0.608175645870493,0.513554785824136,0.389762468933385,0.716106782669926,0.39736270956253,0.360586348559907,0.295379054349154,0.100966449948148,0,0.302478555410522,0.38983152295901,0,0.116876902181569,0.453460767230423,0.221985953374065,1.52513556236109,0.167884616364078,0.965947970160952,0.187682475451182,1.09890974560359,1.2862102744744,0.501572104035363,0.564751842617067,0.920650473014354,1.71868654031819,1.71853182343688,3.42541259885321,0,0,0.45032120322422,0.453142408984205,3.10656187051092,1.03787347584177,1.19707462020309,1.02440163452481,1.94485373654635,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,0,0.565879024158229,1.12369808963859,1.47257850531199,1.03383844120104,0.476293691283074,1.62238056322798,1.35036454324594,1.64834360321323,1.91358596174717,0.685738504770831,0.177475806159338,1.66905332963125,1.30811774969096,0.846984423737976,1.09998990259179,1.28049581010941,0.526139422875686,0.543216455383447,0.561142271657738,0.949080144993393,1.0835493061312,0,0.154936841185966,0.964533054905707,2.24829520144151,0.467863216890817,1.07435527024149,0.57386499620653,1.98532277207564,0.695603506861264 | ||
|short_description=p11@Atn1 | |||
}} | }} |
Latest revision as of 16:06, 26 September 2015
Short description: | p11@Atn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Atn1_5end |
Coexpression cluster: | NA |
Association with transcript: | -473bp_to_ENSMUST00000088357_5end |
EntrezGene: | Atn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 3.21e-12 | 47 |
future brain | 3.21e-12 | 47 |
regional part of brain | 1.59e-11 | 46 |
central nervous system | 2.28e-11 | 73 |
regional part of nervous system | 5.00e-11 | 54 |
nervous system | 1.05e-10 | 75 |
ectoderm-derived structure | 1.40e-10 | 95 |
ectoderm | 1.40e-10 | 95 |
presumptive ectoderm | 1.40e-10 | 95 |
anterior neural tube | 2.52e-10 | 40 |
regional part of forebrain | 6.24e-10 | 39 |
forebrain | 6.24e-10 | 39 |
future forebrain | 6.24e-10 | 39 |
ecto-epithelium | 1.22e-09 | 73 |
brain grey matter | 1.78e-09 | 29 |
regional part of telencephalon | 1.78e-09 | 29 |
telencephalon | 1.78e-09 | 29 |
neural tube | 4.96e-09 | 52 |
neural rod | 4.96e-09 | 52 |
future spinal cord | 4.96e-09 | 52 |
neural keel | 4.96e-09 | 52 |
pre-chordal neural plate | 3.13e-08 | 49 |
neurectoderm | 2.78e-07 | 64 |
neural plate | 2.78e-07 | 64 |
presumptive neural plate | 2.78e-07 | 64 |
gray matter | 4.30e-07 | 34 |