FFCP PHASE1:Mm9::chr6:116288017..116288028,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:116288017..116288028,+
|short_description=p3@March8
|description=CAGE_peak_3_at_March8_5end
|association_with_transcript=-11bp_to_uc009djz.1,uc009dka.1_5en...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=71779 | |EntrezGene=71779 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9DBD2 | |UniProt=Q9DBD2 | ||
|association_with_transcript=-11bp_to_uc009djz.1,uc009dka.1_5end | |||
|cluster_id=chr6:116288017..116288028,+ | |||
|description=CAGE_peak_3_at_March8_5end | |||
|id=chr6:116288017..116288028,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.75e-09!23;CL:0000337!3.75e-09!23;CL:0000540!9.86e-07!33;CL:0000047!9.86e-07!33;CL:0000031!9.86e-07!33;CL:0000404!9.86e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-09,23;CL:0000337,2.66e-09,23;CL:0000540,9.63e-07,33;CL:0000047,9.63e-07,33;CL:0000031,9.63e-07,33;CL:0000404,9.63e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.55e-09!63;UBERON:0001049!1.62e-09!52;UBERON:0005068!1.62e-09!52;UBERON:0006241!1.62e-09!52;UBERON:0007135!1.62e-09!52;UBERON:0003056!1.73e-09!49;UBERON:0001017!2.73e-09!73;UBERON:0005743!2.73e-09!73;UBERON:0003080!4.58e-09!40;UBERON:0002780!7.62e-09!39;UBERON:0001890!7.62e-09!39;UBERON:0006240!7.62e-09!39;UBERON:0002346!1.27e-08!71;UBERON:0003075!1.27e-08!71;UBERON:0007284!1.27e-08!71;UBERON:0000073!1.87e-08!75;UBERON:0001016!1.87e-08!75;UBERON:0002616!4.69e-08!49;UBERON:0000955!4.83e-08!50;UBERON:0006238!4.83e-08!50;UBERON:0004121!7.58e-08!102;UBERON:0000924!7.58e-08!102;UBERON:0006601!7.58e-08!102;UBERON:0002020!3.54e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.47e-09,64;UBERON:0003075,1.47e-09,64;UBERON:0007284,1.47e-09,64;UBERON:0000073,1.56e-09,54;UBERON:0001049,2.43e-09,52;UBERON:0005068,2.43e-09,52;UBERON:0006241,2.43e-09,52;UBERON:0007135,2.43e-09,52;UBERON:0010371,2.82e-09,73;UBERON:0001017,3.65e-09,73;UBERON:0003056,4.10e-09,49;UBERON:0003080,1.21e-08,40;UBERON:0004121,1.90e-08,95;UBERON:0000924,1.90e-08,95;UBERON:0006601,1.90e-08,95;UBERON:0002780,2.03e-08,39;UBERON:0001890,2.03e-08,39;UBERON:0006240,2.03e-08,39;UBERON:0001016,3.15e-08,75;UBERON:0002616,1.53e-07,46;UBERON:0000955,1.57e-07,47;UBERON:0006238,1.57e-07,47;UBERON:0010314,1.67e-07,92;UBERON:0002020,9.55e-07,34 | |||
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| ||
|short_description=p3@March8 | |||
}} | }} |
Latest revision as of 12:20, 26 September 2015
Short description: | p3@March8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_March8_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_uc009djz.1, uc009dka.1_5end |
EntrezGene: | March8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.66e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.66e-09 | 23 |
neuron | 9.63e-07 | 33 |
neuronal stem cell | 9.63e-07 | 33 |
neuroblast | 9.63e-07 | 33 |
electrically signaling cell | 9.63e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.47e-09 | 64 |
neural plate | 1.47e-09 | 64 |
presumptive neural plate | 1.47e-09 | 64 |
regional part of nervous system | 1.56e-09 | 54 |
neural tube | 2.43e-09 | 52 |
neural rod | 2.43e-09 | 52 |
future spinal cord | 2.43e-09 | 52 |
neural keel | 2.43e-09 | 52 |
ecto-epithelium | 2.82e-09 | 73 |
central nervous system | 3.65e-09 | 73 |
pre-chordal neural plate | 4.10e-09 | 49 |
anterior neural tube | 1.21e-08 | 40 |
ectoderm-derived structure | 1.90e-08 | 95 |
ectoderm | 1.90e-08 | 95 |
presumptive ectoderm | 1.90e-08 | 95 |
regional part of forebrain | 2.03e-08 | 39 |
forebrain | 2.03e-08 | 39 |
future forebrain | 2.03e-08 | 39 |
nervous system | 3.15e-08 | 75 |
regional part of brain | 1.53e-07 | 46 |
brain | 1.57e-07 | 47 |
future brain | 1.57e-07 | 47 |
structure with developmental contribution from neural crest | 1.67e-07 | 92 |
gray matter | 9.55e-07 | 34 |