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FFCP PHASE1:Mm9::chr6:112897240..112897271,-: Difference between revisions

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(Created page with "{{FFCP |id=chr6:112897240..112897271,- |short_description=p1@Srgap3 |description=CAGE_peak_1_at_Srgap3_5end |association_with_transcript=0bp_to_ENSMUST00000060215,ENSMUST0...")
 
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{{FFCP
{{FFCP
|id=chr6:112897240..112897271,-
|DHSsupport=NA
|short_description=p1@Srgap3
|DPIdataset=NA
|description=CAGE_peak_1_at_Srgap3_5end
|association_with_transcript=0bp_to_ENSMUST00000060215,ENSMUST00000088373,NM_080448,uc009deh.1,uc009dei.1,uc009dej.1_5end
|EntrezGene=259302
|EntrezGene=259302
|HGNC=
|HGNC=
|MCL_coexpression_id=1655
|TSSclassifier=NA
|UniProt=F8VPQ4,Q812A2,Q91Z68
|UniProt=F8VPQ4,Q812A2,Q91Z68
|association_with_transcript=0bp_to_ENSMUST00000060215,ENSMUST00000088373,NM_080448,uc009deh.1,uc009dei.1,uc009dej.1_5end
|cluster_id=chr6:112897240..112897271,-
|description=CAGE_peak_1_at_Srgap3_5end
|id=chr6:112897240..112897271,-
|ontology_enrichment_celltype=CL:0000221!7.11e-12!44;CL:0000133!7.11e-12!44;CL:0000540!8.73e-12!33;CL:0000047!8.73e-12!33;CL:0000031!8.73e-12!33;CL:0000404!8.73e-12!33;CL:0002319!1.70e-11!43;CL:0000117!1.96e-11!23;CL:0000337!1.96e-11!23;CL:0000393!5.88e-10!39;CL:0000211!5.88e-10!39;CL:0000055!2.88e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000221,6.90e-12,44;CL:0000133,6.90e-12,44;CL:0000540,8.46e-12,33;CL:0000047,8.46e-12,33;CL:0000031,8.46e-12,33;CL:0000404,8.46e-12,33;CL:0002319,1.65e-11,43;CL:0000117,1.90e-11,23;CL:0000337,1.90e-11,23;CL:0000393,5.73e-10,39;CL:0000211,5.73e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.87e-34,95;UBERON:0000924,3.87e-34,95;UBERON:0006601,3.87e-34,95;UBERON:0002346,1.54e-31,64;UBERON:0003075,1.54e-31,64;UBERON:0007284,1.54e-31,64;UBERON:0001017,3.07e-31,73;UBERON:0010371,1.97e-30,73;UBERON:0001016,2.87e-30,75;UBERON:0000073,5.82e-27,54;UBERON:0001049,5.00e-26,52;UBERON:0005068,5.00e-26,52;UBERON:0006241,5.00e-26,52;UBERON:0007135,5.00e-26,52;UBERON:0003056,7.65e-26,49;UBERON:0000955,1.06e-23,47;UBERON:0006238,1.06e-23,47;UBERON:0002616,5.31e-23,46;UBERON:0003080,8.64e-21,40;UBERON:0002780,3.93e-20,39;UBERON:0001890,3.93e-20,39;UBERON:0006240,3.93e-20,39;UBERON:0002020,6.63e-18,34;UBERON:0010314,4.58e-16,92;UBERON:0003528,8.55e-16,29;UBERON:0002791,8.55e-16,29;UBERON:0001893,8.55e-16,29;UBERON:0000956,8.56e-12,21;UBERON:0001869,8.56e-12,21;UBERON:0000203,8.56e-12,21;UBERON:0002619,5.99e-10,17;UBERON:0002021,3.52e-07,10;UBERON:0000411,3.52e-07,10;UBERON:0001950,3.52e-07,10
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2,6.32022241256356,6.68993210457542,5.85452455839515,4.15746633528944,3.04345382634718,2.78153896693771,2.16351809135944,2.95379054349154,2.3222283488074,2.74344503957999,2.31900225814733,4.97035191772737,2.02044867444692,4.09069157635491,2.94749498699775,7.5475224147182,7.71539166841491,15.4453847054952,4.25017106870819,17.0791052660576,15.0184331899157,6.64541975145104,17.5550236412377,79.6300098090064,85.1601687538277,74.4764167471216,57.742669267479,71.2485820561468,70.2516324572421,72.2274075248032,64.3959320610635,77.0342095273148,81.2883689450357,33.2119512269365,52.6712832889361,29.5369137954652,21.8796045361465,14.0440818960748,13.7882631337511,20.0022055021454,19.1612603232172,18.6133141563253,20.2157769411038,16.9831130926461,16.9763707247469,17.7918864192777,19.9118223979143,22.572139299556,14.2888107384922,22.0180219295225,23.534924896572,14.835092428919,20.75504773895,20.9150243955103,15.9728225543404,17.1674056762071,16.2787986628208,20.9863918326187,17.5998384414687,21.4025728261144,21.834786049341,18.0619471414996,22.4456908663095,19.5747779904887,16.7457620038458,18.0061658994663,19.2121683070598,14.0821826016233,30.7267010863673,17.0770074165148,18.4789106481537,12.8163182486125,11.6913452133343,10.434052602919
|phase1_expression=21.1396478178328,0,0,0,0,0.503637815735669,0.233612640595526,0,0.140788722151667,0,3.76679530096111,2.07407613387875,0,0,1.66554880907831,1.01237633694913,0.699561878128147,2.05050407482854,1.91960207048034,1.69755860719212,26.5335065271338,7.94327609607082,1.30599894569468,0.639969691173627,0.22940928106717,0,0,0.215471232685889,0.950117097281869,1.00812051903972,0.443461021310609,0,0,0,0.577703239502549,0.332469290716985,1.22501613757421,0,0,1.57057123192139,0,0,0,19.8916972401412,20.2753862439029,13.2153661556411,3.9119567217402,18.532138292338,20.2111288115714,35.9695313287424,14.5585878490377,30.188038516644,0.838913030288682,0,0.672187598284928,4.63066984864705,2.0057340795713,1.03134418455488,72.2269765268764,51.8411159686592,50.0726808769882,7.45457970552091,3.55717918444456,0,1.97773272513395,0.7104801149461,10.4860038681442,21.1320067926855,44.7939125172623,38.3416864862001,40.172067618114,38.8485338789173,32.6885440608388,35.3998409731217,41.8844708349693,42.284064184061,46.2486700197433,47.1166277534343,51.4581886408416,69.2403010583518,62.303085293241,61.9886910962544,43.8317308432168,42.207195752376,59.2857201374023,39.1856018679978,53.5317519804627,46.0406631188492,4.31639301999149,9.52201657345497,3.18850937571846,0,0,1.07940638327563,0.649776417447669,0,6.03911006566533,20.2812083867889,12.2099422163348,8.48014978824817,38.0277233397037,15.3991772897181,28.028576367731,14.2213340630666,4.32982082022428,3.80039798212648,2.52762222507392,6.73684890342454,12.9468941823586,6.82833839698194,14.7462527751215,7.30717147949139,7.61031140944993,11.0027527603414,11.5236932992991,4.77533047052767,8.40462890296871,3.32578520915797,6.19227386364912,15.0443170451091,8.17113618303456,8.727754556434,14.9113408974498,132.629701046231,130.485298344783,3.32094171771169,11.2626217035565,5.39912457894067,7.49714339731082,78.1907137693175,57.6450759551469,42.596825366261,109.856970361519,101.774752017472,60.2585329222724,76.2533936418461,5.09196819251581,11.3210343255185,4.0435641349388,28.1992086887875,33.9614356132657,33.3358051428536,55.6391981098529,100.972227949929,129.337384886674,130.291653529692,87.7048141879062,42.1686494304596,6.03590380211958,11.7245769704048,13.3722854364601,8.76782929710299,16.9608822027615,12.8853301613202,17.2856994582672,14.7285357445685,1.40442637462647,1.80143534980301,1.42081749697796,1.65700618028402,1.40715635988658,1.98068267607116,4.49814997611899,1.57411385397923,2.46827380619805,0.930135779001631,1.60964040839772,2.10177616260905,2.63295759861569,3.2833492815819,2.43206428637567,2.19299981137998,2.41505126820156,1.07365135008297,144.048614766427,76.2523177730498,2.31293148088659,2.3800550999719,7.46508876873319,8.59275685883622,12.371276286921,9.88249270654378,6.22658522765637,5.89699440948933,2.84717436926707,3.29397909448022,4.77536896720512,4.97391180102877,6.43381487493096,1.79763881730844,4.53889904736858,3.98282546508734,5.69003702859245,12.5673363870702,11.270773567308,10.7935203758017,9.50367187121366,11.221731182451,12.9634901104727,16.5323365737154,14.7578804170892,11.9695249004147,0.296452627087149,2.50267658574141,3.34150291692445,1.57403478669398,1.42002084971952,2.41177159752417,1.52775511068852,1.43848068725405,2.2698931748505,1.09824565275233,2.87536413054709,0.744281895337007,1.5601883655728,0.757736633841335,0.538192240565737,0,2.40179147216586,7.95863929436036,8.63714375142737,6.28056817368196,6.80601720036656,3.01511263395268,2.85652369063216,1.95133647857799,3.31033802623001,3.10050565508285,3.34855014180723,2.62181303545181,3.62638461918381,2.4590339958857,1.50791283939272,1.08781136763742,10.8188140064188,20.9711927191597,97.2936575326019,92.0111739748795,10.9836413402373,5.55436039849621,13.2513452154828,16.3984272604588,22.6194567619439,13.860190281248,16.4871018820972,18.3999745012741,11.7395103485719,20.4579100537918,19.7643888973262,84.1861849025134,14.9037089468682,13.7110514823787,11.0763132360432,17.8167732810338,10.619611067197,14.3240575331439,17.5347663039556,13.7681708221806,10.6308681437078,10.7602301780375,8.26970538138308,9.45187696641514,17.1118741624666,5.68866164284469,3.16255825724996,7.21948802737308,56.172534949375,32.7711191136985,35.9617140916057,36.6516329904023,31.2118811210402,46.7326302117425,49.035608139432,21.0080814889074,33.0887108369832,43.0019103853555,3.30792597082443,11.5420377059036,10.172258881842,8.50412241486998,7.04296829618505,9.68431308495861,3.78925087618806,79.3620292604981,3.07567585436135,7.42992724667601,1.66675074632741,3.57900068308913,4.10082683163076,2.97411625168479,11.2185763795945,12.5956307091292,13.1289975114203,0.954670618015114,8.69923982348122,13.6224042974989,15.4447637375176,15.4725339050707,9.38959024108564,8.36158947585888,9.25718704123762,7.59092231753686,18.79417112731,16.776161453347,8.45539408026285,20.7827999001131,15.7185565934243,18.4728628926845,17.1782565225382,19.9368228079118,21.945803626756,22.1347454234715,42.8874718701157,22.4673232368186,16.7057403629562,6.32022241256356,6.68993210457542,5.85452455839515,4.15746633528944,3.04345382634718,2.78153896693771,2.16351809135944,2.95379054349154,2.3222283488074,2.74344503957999,2.31900225814733,4.97035191772737,2.02044867444692,4.09069157635491,2.94749498699775,7.5475224147182,7.71539166841491,15.4453847054952,4.25017106870819,17.0791052660576,15.0184331899157,6.64541975145104,17.5550236412377,79.6300098090064,85.1601687538277,74.4764167471216,57.742669267479,71.2485820561468,70.2516324572421,72.2274075248032,64.3959320610635,77.0342095273148,81.2883689450357,33.2119512269365,52.6712832889361,29.5369137954652,21.8796045361465,14.0440818960748,13.7882631337511,20.0022055021454,19.1612603232172,18.6133141563253,20.2157769411038,16.9831130926461,16.9763707247469,17.7918864192777,19.9118223979143,22.572139299556,14.2888107384922,22.0180219295225,23.534924896572,14.835092428919,20.75504773895,20.9150243955103,15.9728225543404,17.1674056762071,16.2787986628208,20.9863918326187,17.5998384414687,21.4025728261144,21.834786049341,18.0619471414996,22.4456908663095,19.5747779904887,16.7457620038458,18.0061658994663,19.2121683070598,14.0821826016233,30.7267010863673,17.0770074165148,18.4789106481537,12.8163182486125,11.6913452133343,10.434052602919
|short_description=p1@Srgap3
}}
}}

Latest revision as of 11:11, 26 September 2015

Short description:p1@Srgap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Srgap3_5end
Coexpression cluster:MCL_coexpression_mm9:1655
Association with transcript: 0bp_to_ENSMUST00000060215, ENSMUST00000088373, NM_080448, uc009deh.1, uc009dei.1, uc009dej.1_5end
EntrezGene:Srgap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Srgap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C218.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C372.23
Mouse Granule cells, donor2.CNhs12357.11731-123E351.84
Mouse Granule cells, donor3.CNhs12108.11636-122C750.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E821.13
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D940.17
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F241.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D642.28
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D469.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F462.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D861.99
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E443.83
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E146.04
Mouse Schwann, donor1.CNhs12507.11728-123D94.32
Mouse Schwann, donor2.CNhs12573.11746-123F99.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G638.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C111.52
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F515.04
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B2132.63
cerebellum, neonate N30.CNhs11135.1395-42I2130.49
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.26
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.50
corpora quadrigemina, adult.CNhs10501.16-22A478.19
corpus striatum, adult.CNhs10487.19-21D857.65
corpus striatum, neonate N00.CNhs11226.630-43F142.60
cortex, adult.CNhs10473.12-14D5109.86
cortex, neonate N30.CNhs11107.1392-42F2101.77
diencephalon, adult.CNhs10482.20-12F260.26
diencephalon, neonate N30.CNhs11201.1388-42B276.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G428.20
eyeball, embryo E12.CNhs11016.345-16C633.96
eyeball, embryo E14.CNhs10521.399-16E233.34
eyeball, embryo E15.CNhs10593.426-16C955.64
eyeball, embryo E17.CNhs11023.1261-18D4100.97
eyeball, neonate N00.CNhs11207.633-15C6129.34
eyeball, neonate N01.CNhs11140.1532-43E7130.29
eyeball, neonate N02.CNhs11205.1551-44G887.70
eyeball, neonate N16.CNhs11188.777-19A242.17
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H211.72
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E716.96
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B517.29
gonad, embryo E13.CNhs11044.1564-45I614.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E8144.05
hippocampus, neonate N00.CNhs11228.627-43G176.25
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I57.47
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F812.57
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G711.22
kidney, neonate N10.CNhs11206.758-6D512.96
kidney, neonate N20.CNhs11113.832-19I116.53
kidney, neonate N25.CNhs11122.1353-25F314.76
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F88.64
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C297.29
medulla oblongata, neonate N30.CNhs11200.1396-42A392.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I984.19
ovary, adult.CNhs10507.91-2I714.90
ovary, embryo E18.CNhs11040.505-44H713.71
ovary, neonate N00.CNhs11217.1299-22I411.08
oviduct, adult pregnant day01.CNhs10500.988-6G617.82
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F217.53
pancreas, embryo E16.CNhs11003.460-26E513.77
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G856.17
pituitary gland, embryo E12.CNhs11018.346-16E632.77
pituitary gland, embryo E13.CNhs11009.370-44C735.96
pituitary gland, embryo E14.CNhs11037.398-44A536.65
pituitary gland, embryo E15.CNhs10592.427-16B931.21
pituitary gland, embryo E16.CNhs11036.449-43F646.73
pituitary gland, embryo E17.CNhs11039.1265-44F549.04
pituitary gland, neonate N00.CNhs11190.1308-22E921.01
placenta, adult pregnant day10.CNhs10472.539-13I733.09
placenta, adult pregnant day17.CNhs10464.577-18G343.00
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G410.17
skin, neonate N03.CNhs11215.662-22H38.50
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C49.68
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C979.36
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.13
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D515.47
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A99.26
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I118.79
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F520.78
testis, embryo E15.CNhs11034.443-27C515.72
testis, embryo E16.CNhs11033.470-26G518.47
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G519.94
testis, neonate N00.CNhs11189.1300-22B721.95
testis, neonate N07.CNhs11222.726-26I422.13
testis, neonate N10.CNhs11204.763-44D942.89
testis, neonate N20.CNhs11110.839-18H322.47
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.45
urinary bladder, adult.CNhs10481.879-12E44.25
uterus, adult pregnant day19.CNhs10497.590-15F517.08
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D56.65
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A285.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A374.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A471.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A570.25
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A672.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A764.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A877.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A981.29
whole body, embryo E11.CNhs11014.324-5I833.21
whole body, embryo E12.CNhs10587.857-27C952.67
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D221.88
whole body, embryo E14.CNhs10519.395-14B114.04
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.22
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.79
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.76
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G520.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.21
whole body, embryo E17.5.CNhs10513.490-9F914.08
whole body, embryo E17.CNhs10517.475-3I530.73
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C218.48
whole body, neonate N01.CNhs10576.659-23C612.82
whole body, neonate N06.CNhs10515.692-21D111.69
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.90e-1244
neurectodermal cell6.90e-1244
neuron8.46e-1233
neuronal stem cell8.46e-1233
neuroblast8.46e-1233
electrically signaling cell8.46e-1233
neural cell1.65e-1143
CNS neuron (sensu Vertebrata)1.90e-1123
neuroblast (sensu Vertebrata)1.90e-1123
electrically responsive cell5.73e-1039
electrically active cell5.73e-1039

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.87e-3495
ectoderm3.87e-3495
presumptive ectoderm3.87e-3495
neurectoderm1.54e-3164
neural plate1.54e-3164
presumptive neural plate1.54e-3164
central nervous system3.07e-3173
ecto-epithelium1.97e-3073
nervous system2.87e-3075
regional part of nervous system5.82e-2754
neural tube5.00e-2652
neural rod5.00e-2652
future spinal cord5.00e-2652
neural keel5.00e-2652
pre-chordal neural plate7.65e-2649
brain1.06e-2347
future brain1.06e-2347
regional part of brain5.31e-2346
anterior neural tube8.64e-2140
regional part of forebrain3.93e-2039
forebrain3.93e-2039
future forebrain3.93e-2039
gray matter6.63e-1834
structure with developmental contribution from neural crest4.58e-1692
brain grey matter8.55e-1629
regional part of telencephalon8.55e-1629
telencephalon8.55e-1629
cerebral cortex8.56e-1221
cerebral hemisphere8.56e-1221
pallium8.56e-1221
regional part of cerebral cortex5.99e-1017
occipital lobe3.52e-0710
visual cortex3.52e-0710
neocortex3.52e-0710
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