FFCP PHASE1:Mm9::chr5:90312370..90312403,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:90312370..90312403,-
|short_description=p1@Adamts3
|description=CAGE_peak_1_at_Adamts3_5end
|association_with_transcript=-11bp_to_ENSMUST00000051989,ENSMUS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=330119 | |EntrezGene=330119 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3531 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIB2,G3X9D2,E9Q287,B2RY57,B2RY45 | |UniProt=Q8BIB2,G3X9D2,E9Q287,B2RY57,B2RY45 | ||
|association_with_transcript=-11bp_to_ENSMUST00000051989,ENSMUST00000061427,ENSMUST00000163159,NM_001081401,NM_177872,uc008yaq.2,uc012dyf.1_5end | |||
|cluster_id=chr5:90312370..90312403,- | |||
|description=CAGE_peak_1_at_Adamts3_5end | |||
|id=chr5:90312370..90312403,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.69e-14!52;UBERON:0005068!6.69e-14!52;UBERON:0006241!6.69e-14!52;UBERON:0007135!6.69e-14!52;UBERON:0000955!2.28e-13!50;UBERON:0006238!2.28e-13!50;UBERON:0002616!7.73e-13!49;UBERON:0002346!1.01e-12!71;UBERON:0003075!1.01e-12!71;UBERON:0007284!1.01e-12!71;UBERON:0002020!2.05e-12!34;UBERON:0000033!3.54e-12!63;UBERON:0000956!1.15e-11!21;UBERON:0001869!1.15e-11!21;UBERON:0000203!1.15e-11!21;UBERON:0002791!2.00e-11!29;UBERON:0003528!2.00e-11!29;UBERON:0001893!2.00e-11!29;UBERON:0000025!2.06e-11!114;UBERON:0003080!3.18e-11!40;UBERON:0003056!3.30e-11!49;UBERON:0002780!9.38e-11!39;UBERON:0001890!9.38e-11!39;UBERON:0006240!9.38e-11!39;UBERON:0004111!4.22e-10!122;UBERON:0002619!4.69e-09!17;UBERON:0000153!3.60e-08!94;UBERON:0001017!1.45e-07!73;UBERON:0005743!1.45e-07!73;UBERON:0004121!5.51e-07!102;UBERON:0000924!5.51e-07!102;UBERON:0006601!5.51e-07!102;UBERON:0000073!8.74e-07!75;UBERON:0001016!8.74e-07!75;UBERON:0002021!9.75e-07!10;UBERON:0000411!9.75e-07!10;UBERON:0001950!9.75e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.52e-17,92;UBERON:0000073,3.89e-14,54;UBERON:0001049,4.98e-14,52;UBERON:0005068,4.98e-14,52;UBERON:0006241,4.98e-14,52;UBERON:0007135,4.98e-14,52;UBERON:0000955,6.57e-13,47;UBERON:0006238,6.57e-13,47;UBERON:0002020,1.32e-12,34;UBERON:0002346,1.36e-12,64;UBERON:0003075,1.36e-12,64;UBERON:0007284,1.36e-12,64;UBERON:0002616,2.31e-12,46;UBERON:0000956,3.86e-12,21;UBERON:0001869,3.86e-12,21;UBERON:0000203,3.86e-12,21;UBERON:0010371,1.18e-11,73;UBERON:0003528,1.46e-11,29;UBERON:0002791,1.46e-11,29;UBERON:0001893,1.46e-11,29;UBERON:0000025,1.55e-11,114;UBERON:0003056,4.33e-11,49;UBERON:0003080,4.70e-11,40;UBERON:0002780,1.43e-10,39;UBERON:0001890,1.43e-10,39;UBERON:0006240,1.43e-10,39;UBERON:0004111,5.08e-10,122;UBERON:0002619,2.08e-09,17;UBERON:0001017,2.66e-07,73;UBERON:0002021,5.55e-07,10;UBERON:0000411,5.55e-07,10;UBERON:0001950,5.55e-07,10 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,1.267098499365,0.468129052643987,0,0,1.02720437958723,0.786783621770977,2.99798785634096,3.23960427823721,1.39912375625629,0.473193248037357,0.411343300817216,0,2.12608225377674,0.297872853602656,0,0,0,0,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,0,2.39827672018491,2.19686182734472,1.74986909166855,0.419959264876088,0,0,0,0.336093799142464,0.257259436035947,1.71920063963254,2.57836046138721,1.01158230429799,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,14.7239249478038,12.8255641415106,13.4607975264884,3.42781181284564,1.98781686856452,6.98197555525238,4.98396449294829,8.27296907949019,1.10115880999389,5.36286819957788,4.45458946443106,0.923204014111357,1.37231465403614,1.04182674111352,2.23346399201105,2.25105044012672,3.20876320331301,2.65165726926301,2.84743361598206,3.91438836233131,0.151452386666368,0.151143120213571,2.02905142091174,0.860423876981386,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0.253359865475099,0,0.91347103775248,2.58937883647172,3.26572705942614,1.56136794089522,1.52232739156071,1.61430848079241,1.80867168663147,1.99900802130698,2.26199864393416,0.988779870937496,1.87979163995885,0.884610551949874,6.14714029800155,2.42925670306433,2.42437626567611,1.86391761218122,8.19786231632332,4.1889341362691,0.766371165625774,1.67741174308288,1.19980546198682,1.39777249780371,5.69204429738326,16.0125210986519,7.16229807043327,7.12679712788333,7.41574826257959,6.44142938134636,9.5722345209977,1.62942982160506,2.36373244159177,0.252722758433675,7.57590681191306,1.69156575851515,1.60931473103431,1.80062129805349,1.80845781402858,1.36072998302656,1.2811372028485,1.40552586839593,12.1590584247337,1.72454394346274,2.64748512234947,4.04687585577082,6.57587197282724,5.56094498451196,9.4028084960985,4.93877127379064,2.58744546864041,3.51106593656617,1.28673953557358,1.70498099637356,2.27838349789052,2.11073453982987,2.70093092191522,2.3674473558521,1.96764231747404,3.08534225774756,3.48800917125612,4.82892122519315,3.85325629811659,5.9241545968853,7.22336841948019,7.53939928776458,5.70179950958796,7.24515380460467,5.50246316917524,6.51898840548794,10.496270462687,0,0,1.91959425481711,2.78684006232526,1.28867461322093,1.21010114774006,1.55664630691409,1.71203063501303,0,1.31759163779209,1.00534083520108,0.994782360205754,0.974820435595601,0,0.864552199498777,0.398282546508734,0.758671603812327,1.37098215131675,2.25415471346161,1.01825663922657,0.969762435838129,1.82353131714828,0.885311519739602,0.295220295959204,0.470996183524124,0.616985819609003,0.592905254174298,2.00214126859313,2.35870794135844,1.12431056192427,2.23146133527353,1.92941727801933,2.03700681425136,1.43848068725405,1.45921704097532,0.274561413188081,2.87536413054709,0.744281895337007,0,1.01031551178845,0.358794827043824,0,2.03228509183265,1.32643988239339,2.93336957595647,4.07388205860452,2.34690248288502,2.1775813467436,2.85652369063216,2.34160377429359,1.89162172927429,1.32878813789265,0.797273843287435,1.80249646187312,0.863424909329478,1.88043776155965,0,0,2.95058563811422,2.75936746304733,4.97706828962155,5.27452589664914,0,1.76729649043061,1.26203287766503,0.390438744296638,0.430846795465598,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,2.83880170416537,1.42452482933804,1.62886959353576,3.46437258242324,1.32745138339963,0.971122544619926,0.604647113929502,0.754420319023592,0.885905678642318,1.53717573971964,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0.720244376125241,0.646793418913773,2.35770738534752,2.12808280370728,2.14042581122485,2.63278432963394,1.522324745573,7.27482294997502,1.69465656691056,0.661585194164886,1.6488625294148,0.645857706783622,1.02531972377865,1.07435109602823,1.64140899745061,1.45740418314925,5.19190845629427,1.36696704638282,2.47664241555867,2.40752885580625,1.88368457004691,2.1871076435364,1.14389086603261,1.86976272993241,2.37917468950219,1.79659965945751,0,2.37251995185852,0.609958401380546,1.29606408986162,0.836353184057875,1.31017538247707,2.29269388854195,1.81837602595739,0.26175594198403,1.03691978633434,0,0,0.598066184175915,1.32366792365678,0.972255941720238,0.387479470433193,0.844780627453891,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0.288030006257865,0.948033361884535,1.62180172232131,1.02710957164827,1.03936658382236,1.43221356533985,0.79472541912506,1.56254084375959,1.03382669022204,1.31256384932592,1.06689529317,0.302478555410522,1.26695244961678,1.34696578296461,1.98690733708667,0.680191150845634,0.443971906748129,0.807424709485281,0.671538465456314,1.54551675225752,7.88266396894964,3.47988086107804,2.35805216986972,0,10.1655331671072,7.36520378411483,9.73922372846974,12.3734291287455,5.48066015816514,8.3093328712867,10.8003600037089,2.7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|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,1.267098499365,0.468129052643987,0,0,1.02720437958723,0.786783621770977,2.99798785634096,3.23960427823721,1.39912375625629,0.473193248037357,0.411343300817216,0,2.12608225377674,0.297872853602656,0,0,0,0,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,0,2.39827672018491,2.19686182734472,1.74986909166855,0.419959264876088,0,0,0,0.336093799142464,0.257259436035947,1.71920063963254,2.57836046138721,1.01158230429799,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,0,14.7239249478038,12.8255641415106,13.4607975264884,3.42781181284564,1.98781686856452,6.98197555525238,4.98396449294829,8.27296907949019,1.10115880999389,5.36286819957788,4.45458946443106,0.923204014111357,1.37231465403614,1.04182674111352,2.23346399201105,2.25105044012672,3.20876320331301,2.65165726926301,2.84743361598206,3.91438836233131,0.151452386666368,0.151143120213571,2.02905142091174,0.860423876981386,0,0,0,0,1.12355536105401,0,0,0,3.66192891419369,0,0,0,0,0.253359865475099,0,0.91347103775248,2.58937883647172,3.26572705942614,1.56136794089522,1.52232739156071,1.61430848079241,1.80867168663147,1.99900802130698,2.26199864393416,0.988779870937496,1.87979163995885,0.884610551949874,6.14714029800155,2.42925670306433,2.42437626567611,1.86391761218122,8.19786231632332,4.1889341362691,0.766371165625774,1.67741174308288,1.19980546198682,1.39777249780371,5.69204429738326,16.0125210986519,7.16229807043327,7.12679712788333,7.41574826257959,6.44142938134636,9.5722345209977,1.62942982160506,2.36373244159177,0.252722758433675,7.57590681191306,1.69156575851515,1.60931473103431,1.80062129805349,1.80845781402858,1.36072998302656,1.2811372028485,1.40552586839593,12.1590584247337,1.72454394346274,2.64748512234947,4.04687585577082,6.57587197282724,5.56094498451196,9.4028084960985,4.93877127379064,2.58744546864041,3.51106593656617,1.28673953557358,1.70498099637356,2.27838349789052,2.11073453982987,2.70093092191522,2.3674473558521,1.96764231747404,3.08534225774756,3.48800917125612,4.82892122519315,3.85325629811659,5.9241545968853,7.22336841948019,7.53939928776458,5.70179950958796,7.24515380460467,5.50246316917524,6.51898840548794,10.496270462687,0,0,1.91959425481711,2.78684006232526,1.28867461322093,1.21010114774006,1.55664630691409,1.71203063501303,0,1.31759163779209,1.00534083520108,0.994782360205754,0.974820435595601,0,0.864552199498777,0.398282546508734,0.758671603812327,1.37098215131675,2.25415471346161,1.01825663922657,0.969762435838129,1.82353131714828,0.885311519739602,0.295220295959204,0.470996183524124,0.616985819609003,0.592905254174298,2.00214126859313,2.35870794135844,1.12431056192427,2.23146133527353,1.92941727801933,2.03700681425136,1.43848068725405,1.45921704097532,0.274561413188081,2.87536413054709,0.744281895337007,0,1.01031551178845,0.358794827043824,0,2.03228509183265,1.32643988239339,2.93336957595647,4.07388205860452,2.34690248288502,2.1775813467436,2.85652369063216,2.34160377429359,1.89162172927429,1.32878813789265,0.797273843287435,1.80249646187312,0.863424909329478,1.88043776155965,0,0,2.95058563811422,2.75936746304733,4.97706828962155,5.27452589664914,0,1.76729649043061,1.26203287766503,0.390438744296638,0.430846795465598,0,0.222798674082394,0.566153061577665,0.404810701674894,0.584511715822624,0.395287777946524,7.06906896127976,2.83880170416537,1.42452482933804,1.62886959353576,3.46437258242324,1.32745138339963,0.971122544619926,0.604647113929502,0.754420319023592,0.885905678642318,1.53717573971964,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0.720244376125241,0.646793418913773,2.35770738534752,2.12808280370728,2.14042581122485,2.63278432963394,1.522324745573,7.27482294997502,1.69465656691056,0.661585194164886,1.6488625294148,0.645857706783622,1.02531972377865,1.07435109602823,1.64140899745061,1.45740418314925,5.19190845629427,1.36696704638282,2.47664241555867,2.40752885580625,1.88368457004691,2.1871076435364,1.14389086603261,1.86976272993241,2.37917468950219,1.79659965945751,0,2.37251995185852,0.609958401380546,1.29606408986162,0.836353184057875,1.31017538247707,2.29269388854195,1.81837602595739,0.26175594198403,1.03691978633434,0,0,0.598066184175915,1.32366792365678,0.972255941720238,0.387479470433193,0.844780627453891,0.821500670520278,0.911430693907651,0.209718688851422,0.483168241652012,0.288030006257865,0.948033361884535,1.62180172232131,1.02710957164827,1.03936658382236,1.43221356533985,0.79472541912506,1.56254084375959,1.03382669022204,1.31256384932592,1.06689529317,0.302478555410522,1.26695244961678,1.34696578296461,1.98690733708667,0.680191150845634,0.443971906748129,0.807424709485281,0.671538465456314,1.54551675225752,7.88266396894964,3.47988086107804,2.35805216986972,0,10.1655331671072,7.36520378411483,9.73922372846974,12.3734291287455,5.48066015816514,8.3093328712867,10.8003600037089,2.7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| ||
|short_description=p1@Adamts3 | |||
}} | }} |
Latest revision as of 07:51, 26 September 2015
Short description: | p1@Adamts3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adamts3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3531 |
Association with transcript: | -11bp_to_ENSMUST00000051989, ENSMUST00000061427, ENSMUST00000163159, NM_001081401, NM_177872, uc008yaq.2, uc012dyf.1_5end |
EntrezGene: | Adamts3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.52e-17 | 92 |
regional part of nervous system | 3.89e-14 | 54 |
neural tube | 4.98e-14 | 52 |
neural rod | 4.98e-14 | 52 |
future spinal cord | 4.98e-14 | 52 |
neural keel | 4.98e-14 | 52 |
brain | 6.57e-13 | 47 |
future brain | 6.57e-13 | 47 |
gray matter | 1.32e-12 | 34 |
neurectoderm | 1.36e-12 | 64 |
neural plate | 1.36e-12 | 64 |
presumptive neural plate | 1.36e-12 | 64 |
regional part of brain | 2.31e-12 | 46 |
cerebral cortex | 3.86e-12 | 21 |
cerebral hemisphere | 3.86e-12 | 21 |
pallium | 3.86e-12 | 21 |
ecto-epithelium | 1.18e-11 | 73 |
brain grey matter | 1.46e-11 | 29 |
regional part of telencephalon | 1.46e-11 | 29 |
telencephalon | 1.46e-11 | 29 |
tube | 1.55e-11 | 114 |
pre-chordal neural plate | 4.33e-11 | 49 |
anterior neural tube | 4.70e-11 | 40 |
regional part of forebrain | 1.43e-10 | 39 |
forebrain | 1.43e-10 | 39 |
future forebrain | 1.43e-10 | 39 |
anatomical conduit | 5.08e-10 | 122 |
regional part of cerebral cortex | 2.08e-09 | 17 |
central nervous system | 2.66e-07 | 73 |
occipital lobe | 5.55e-07 | 10 |
visual cortex | 5.55e-07 | 10 |
neocortex | 5.55e-07 | 10 |