Personal tools

FFCP PHASE1:Mm9::chr5:72091195..72091212,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr5:72091195..72091212,+ |short_description=p2@Gabrb1 |description=CAGE_peak_2_at_Gabrb1_5end |association_with_transcript=24bp_to_ENSMUST00000031122_5end |En...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:72091195..72091212,+
|DHSsupport=NA
|short_description=p2@Gabrb1
|DPIdataset=NA
|description=CAGE_peak_2_at_Gabrb1_5end
|association_with_transcript=24bp_to_ENSMUST00000031122_5end
|EntrezGene=14400
|EntrezGene=14400
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P50571
|UniProt=P50571
|association_with_transcript=24bp_to_ENSMUST00000031122_5end
|cluster_id=chr5:72091195..72091212,+
|description=CAGE_peak_2_at_Gabrb1_5end
|id=chr5:72091195..72091212,+
|ontology_enrichment_celltype=CL:0000117!1.68e-09!23;CL:0000337!1.68e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.25e-09,23;CL:0000337,1.25e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.63e-25!52;UBERON:0005068!5.63e-25!52;UBERON:0006241!5.63e-25!52;UBERON:0007135!5.63e-25!52;UBERON:0000955!1.07e-23!50;UBERON:0006238!1.07e-23!50;UBERON:0001017!2.33e-23!73;UBERON:0005743!2.33e-23!73;UBERON:0002616!5.80e-23!49;UBERON:0000073!5.46e-22!75;UBERON:0001016!5.46e-22!75;UBERON:0000033!3.87e-21!63;UBERON:0002346!4.42e-21!71;UBERON:0003075!4.42e-21!71;UBERON:0007284!4.42e-21!71;UBERON:0002020!1.88e-19!34;UBERON:0003080!1.23e-18!40;UBERON:0002780!7.21e-18!39;UBERON:0001890!7.21e-18!39;UBERON:0006240!7.21e-18!39;UBERON:0003056!7.64e-18!49;UBERON:0002791!2.82e-16!29;UBERON:0003528!2.82e-16!29;UBERON:0001893!2.82e-16!29;UBERON:0004121!5.19e-16!102;UBERON:0000924!5.19e-16!102;UBERON:0006601!5.19e-16!102;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!3.62e-10!17;UBERON:0000153!5.11e-10!94;UBERON:0007811!7.19e-10!86;UBERON:0002021!9.42e-09!10;UBERON:0000411!9.42e-09!10;UBERON:0001950!9.42e-09!10;UBERON:0000025!1.72e-07!114;UBERON:0003076!6.53e-07!12;UBERON:0003057!6.53e-07!12;UBERON:0004111!7.17e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.43e-32,54;UBERON:0001049,2.66e-30,52;UBERON:0005068,2.66e-30,52;UBERON:0006241,2.66e-30,52;UBERON:0007135,2.66e-30,52;UBERON:0001017,1.38e-28,73;UBERON:0001016,2.12e-27,75;UBERON:0000955,2.95e-25,47;UBERON:0006238,2.95e-25,47;UBERON:0002346,1.72e-24,64;UBERON:0003075,1.72e-24,64;UBERON:0007284,1.72e-24,64;UBERON:0002616,3.30e-24,46;UBERON:0002020,1.77e-23,34;UBERON:0003080,1.17e-21,40;UBERON:0010371,6.66e-21,73;UBERON:0002780,1.52e-20,39;UBERON:0001890,1.52e-20,39;UBERON:0006240,1.52e-20,39;UBERON:0004121,2.99e-20,95;UBERON:0000924,2.99e-20,95;UBERON:0006601,2.99e-20,95;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0003056,4.20e-18,49;UBERON:0010314,1.35e-14,92;UBERON:0002619,4.49e-13,17;UBERON:0002021,7.86e-13,10;UBERON:0000411,7.86e-13,10;UBERON:0001950,7.86e-13,10;UBERON:0000956,1.66e-11,21;UBERON:0001869,1.66e-11,21;UBERON:0000203,1.66e-11,21;UBERON:0000025,4.48e-10,114;UBERON:0004111,3.49e-09,122;UBERON:0003076,5.14e-09,12;UBERON:0003057,5.14e-09,12;UBERON:0002420,8.65e-09,8;UBERON:0007245,8.65e-09,8;UBERON:0010009,8.65e-09,8;UBERON:0010011,8.65e-09,8;UBERON:0000454,8.65e-09,8;UBERON:0002240,2.86e-07,6;UBERON:0005174,2.86e-07,6;UBERON:0001137,2.86e-07,6
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,3.29529274101708,6.61061656852564,0.55994568650145,0,0,0,0,0,0,1.54701627683233,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.945041568321835,0.630974884054146,3.99911378165325,3.97563373712904,0.61245399607477,0.479227355091182,0,6.60695285996332,11.3641730895817,15.0534402591119,1.58263545276233,1.55528994124096,2.6045668527838,4.74611098302348,19.1339287410771,20.0165704587621,10.0173719061047,10.1083893367363,2.79599168737951,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,8.49064311333487,8.3778682725382,0,0,0,0,17.0761328921498,14.1825186873774,2.89005009859588,19.9897968221118,18.9229438424445,13.9217989854905,17.5220564113178,2.74966282395854,1.36847667671102,2.52722758433675,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,26.7068234676442,8.64398743985989,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0,0,0,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,14.2890025089135,16.6440594960929,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,12.5315313404505,0.425820255624806,0.890328018336276,1.95464351224291,2.14461159864296,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,18.3837387107046,0.18006109403131,0,0,0.709360934569094,1.07021290561242,1.81003922662333,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,18.17167959703,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.194451188344048,1.03327858782185,1.01373675294467,0.704143431874524,0.911430693907651,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.214368379079066,0,23.1548255472997,19.3336599333014,12.0308057822273,15.1230800462445,11.6464028361009,12.8416962556249,24.300810008345,16.2115633160719,15.8599843144472,13.4617681055473,0,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.551530525350042,2.66696073361938,1.44224540067226,1.28367683836726,1.26348605881899,1.2673964994512,0.565879024158229,1.96647165686753,1.08842759088278,1.83793500657962,0.476293691283074,1.73826488917283,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,0.887379030796687,1.43061713968393,1.0174249164263,1.03520318456864,1.52306294205018,1.28049581010941,1.05227884575137,1.49384525230448,1.68342681497322,1.89816028998679,1.37906275325789,0.409231043169689,2.63392630016142,0.964533054905707,2.24829520144151,1.16965804222704,1.93383948643468,0.382576664137687,0.661774257358546,0.927471342481686
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,3.29529274101708,6.61061656852564,0.55994568650145,0,0,0,0,0,0,1.54701627683233,1.82084814773638,2.64495489636016,0,0,0,0,0,0,0,2.30530983192933,0.622137673850866,0.945041568321835,0.630974884054146,3.99911378165325,3.97563373712904,0.61245399607477,0.479227355091182,0,6.60695285996332,11.3641730895817,15.0534402591119,1.58263545276233,1.55528994124096,2.6045668527838,4.74611098302348,19.1339287410771,20.0165704587621,10.0173719061047,10.1083893367363,2.79599168737951,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0,0,0,8.49064311333487,8.3778682725382,0,0,0,0,17.0761328921498,14.1825186873774,2.89005009859588,19.9897968221118,18.9229438424445,13.9217989854905,17.5220564113178,2.74966282395854,1.36847667671102,2.52722758433675,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.768682321709099,0.281105173679186,1.81092359517311,0,0.189106080167819,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,26.7068234676442,8.64398743985989,0,0,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0,0,0,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,14.2890025089135,16.6440594960929,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0.584511715822624,0,12.5315313404505,0.425820255624806,0.890328018336276,1.95464351224291,2.14461159864296,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,18.3837387107046,0.18006109403131,0,0,0.709360934569094,1.07021290561242,1.81003922662333,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0,18.17167959703,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.194451188344048,1.03327858782185,1.01373675294467,0.704143431874524,0.911430693907651,0.209718688851422,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0.214368379079066,0,23.1548255472997,19.3336599333014,12.0308057822273,15.1230800462445,11.6464028361009,12.8416962556249,24.300810008345,16.2115633160719,15.8599843144472,13.4617681055473,0,0.399024873401031,0.512200817262403,0.729320151204882,0.419226325255965,0.551530525350042,2.66696073361938,1.44224540067226,1.28367683836726,1.26348605881899,1.2673964994512,0.565879024158229,1.96647165686753,1.08842759088278,1.83793500657962,0.476293691283074,1.73826488917283,1.15745532278223,0.824171801606613,1.32479028120958,0.342869252385415,0.887379030796687,1.43061713968393,1.0174249164263,1.03520318456864,1.52306294205018,1.28049581010941,1.05227884575137,1.49384525230448,1.68342681497322,1.89816028998679,1.37906275325789,0.409231043169689,2.63392630016142,0.964533054905707,2.24829520144151,1.16965804222704,1.93383948643468,0.382576664137687,0.661774257358546,0.927471342481686
|short_description=p2@Gabrb1
}}
}}

Latest revision as of 04:43, 26 September 2015

Short description:p2@Gabrb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gabrb1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 24bp_to_ENSMUST00000031122_5end
EntrezGene:Gabrb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gabrb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.08
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F218.92
diencephalon, adult.CNhs10482.20-12F213.92
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E826.71
hippocampus, neonate N00.CNhs11228.627-43G18.64
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.29
medulla oblongata, neonate N30.CNhs11200.1396-42A316.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G818.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.25e-0923
neuroblast (sensu Vertebrata)1.25e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.43e-3254
neural tube2.66e-3052
neural rod2.66e-3052
future spinal cord2.66e-3052
neural keel2.66e-3052
central nervous system1.38e-2873
nervous system2.12e-2775
brain2.95e-2547
future brain2.95e-2547
neurectoderm1.72e-2464
neural plate1.72e-2464
presumptive neural plate1.72e-2464
regional part of brain3.30e-2446
gray matter1.77e-2334
anterior neural tube1.17e-2140
ecto-epithelium6.66e-2173
regional part of forebrain1.52e-2039
forebrain1.52e-2039
future forebrain1.52e-2039
ectoderm-derived structure2.99e-2095
ectoderm2.99e-2095
presumptive ectoderm2.99e-2095
brain grey matter1.04e-1829
regional part of telencephalon1.04e-1829
telencephalon1.04e-1829
pre-chordal neural plate4.20e-1849
structure with developmental contribution from neural crest1.35e-1492
regional part of cerebral cortex4.49e-1317
occipital lobe7.86e-1310
visual cortex7.86e-1310
neocortex7.86e-1310
cerebral cortex1.66e-1121
cerebral hemisphere1.66e-1121
pallium1.66e-1121
tube4.48e-10114
anatomical conduit3.49e-09122
posterior neural tube5.14e-0912
chordal neural plate5.14e-0912
basal ganglion8.65e-098
nuclear complex of neuraxis8.65e-098
aggregate regional part of brain8.65e-098
collection of basal ganglia8.65e-098
cerebral subcortex8.65e-098
spinal cord2.86e-076
dorsal region element2.86e-076
dorsum2.86e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:72091195..72091212,%2B&oldid=4233846"