FFCP PHASE1:Mm9::chr5:49676892..49676938,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:49676892..49676938,-
|short_description=p2@Kcnip4
|description=CAGE_peak_2_at_Kcnip4_5end
|association_with_transcript=0bp_to_NM_001199244,uc008xjx.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=80334 | |EntrezGene=80334 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UFC0 | |UniProt=Q3UFC0 | ||
|association_with_transcript=0bp_to_NM_001199244,uc008xjx.1_5end | |||
|cluster_id=chr5:49676892..49676938,- | |||
|description=CAGE_peak_2_at_Kcnip4_5end | |||
|id=chr5:49676892..49676938,- | |||
|ontology_enrichment_celltype=CL:0000117!4.21e-07!23;CL:0000337!4.21e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.54e-08,23;CL:0000337,6.54e-08,23;CL:0000540,7.14e-08,33;CL:0000047,7.14e-08,33;CL:0000031,7.14e-08,33;CL:0000404,7.14e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.33e-10!71;UBERON:0003075!1.33e-10!71;UBERON:0007284!1.33e-10!71;UBERON:0000073!3.48e-10!75;UBERON:0001016!3.48e-10!75;UBERON:0001017!5.43e-10!73;UBERON:0005743!5.43e-10!73;UBERON:0001049!1.03e-08!52;UBERON:0005068!1.03e-08!52;UBERON:0006241!1.03e-08!52;UBERON:0007135!1.03e-08!52;UBERON:0004121!1.83e-08!102;UBERON:0000924!1.83e-08!102;UBERON:0006601!1.83e-08!102;UBERON:0000955!3.34e-08!50;UBERON:0006238!3.34e-08!50;UBERON:0000033!7.13e-08!63;UBERON:0002616!1.13e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.58e-14,73;UBERON:0001016,2.57e-13,75;UBERON:0000073,1.66e-11,54;UBERON:0002346,1.26e-10,64;UBERON:0003075,1.26e-10,64;UBERON:0007284,1.26e-10,64;UBERON:0003076,2.19e-10,12;UBERON:0003057,2.19e-10,12;UBERON:0001049,1.22e-09,52;UBERON:0005068,1.22e-09,52;UBERON:0006241,1.22e-09,52;UBERON:0007135,1.22e-09,52;UBERON:0004121,1.22e-09,95;UBERON:0000924,1.22e-09,95;UBERON:0006601,1.22e-09,95;UBERON:0011216,1.74e-09,194;UBERON:0010371,1.69e-08,73;UBERON:0002950,7.39e-08,4;UBERON:0001891,7.39e-08,4;UBERON:0009616,7.39e-08,4;UBERON:0010286,7.39e-08,4;UBERON:0000955,7.43e-07,47;UBERON:0006238,7.43e-07,47;UBERON:0002240,8.49e-07,6;UBERON:0005174,8.49e-07,6;UBERON:0001137,8.49e-07,6 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,1.14260393761521,1.98781686856452,0.122490799214954,0,0,6.60695285996332,7.53355294702608,10.9060638611933,0.923204014111357,0.182975287204819,0.52091337055676,6.70039197603314,2.8138130501584,5.80633341551878,1.47314292736834,4.6982654663704,0.372798891650601,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0,14.115912515575,7.64415719119937,7.11066703153331,0,0,0,0.11418387971906,0,1.03909497345377,0.173485326766136,0,0,0.301445281105245,0,0.502666365318702,0,0.144599356919912,0,0,0,0,1.86391761218122,4.68449275218475,3.56059401582874,0.255457055208591,0,0,0,17.9748767285787,14.640019290196,0.251308704225729,3.65031072403781,1.53429274398198,11.6361304953354,8.76102820565891,0.101839363850316,0,1.26361379216837,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.281105173679186,1.55222022443409,0,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,1.47202963994889,0,0,0,0.213288250535234,1.39342003116263,1.54640953586512,1.00841762311671,0.889512175379481,1.14135375667535,0.474529061544512,0.658795818896044,1.50801125280162,1.79060824837036,1.75467678407208,0,0.864552199498777,1.59313018603494,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0412942490844,10.6662634798905,0,0,1.89304931649754,1.95219372148319,2.58508077279359,0,0,0.283076530788832,0,0,0,3.85585579706168,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0,0.948110273807448,1.05418608574999,0,0,0,0.129358683782755,0,0,0.178368817602071,0.658196082408484,0,0,0,1.7642271844397,0,0.161464426695906,0,0,0,0.291480836629851,14.4631735568198,0,0,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,0.86404272657441,2.09088296014469,1.09181281873089,1.75323650300267,1.1571483801547,1.57053565190418,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,0.572895513439397,0.859265911718438,2.05524755931193,0.755393897389701,0,1.35096360967266,0.906284817968409,0,0.207574695168353,0,0.341467211508268,0.486213434136588,0.209613162627982,0,0.666740183404846,0.618105171716683,0.962757628775446,0.758091635291392,0.50695859978048,0.188626341386076,1.03005658216871,0.640251524048693,0.402048282689293,0,0.579421629724277,0.192909220463705,0.824171801606613,0.441596760403192,1.37147700954166,0.887379030796687,0.238436189947321,0.436039249896986,0.658765662907314,0.507687647350059,0.365855945745545,1.57841826862706,0.407412341537585,0,0.237270036248348,0.0985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0.701794825336225,1.07435527024149,0,0,0.231867835620421 | ||
|short_description=p2@Kcnip4 | |||
}} | }} |
Latest revision as of 01:38, 26 September 2015
Short description: | p2@Kcnip4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnip4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_NM_001199244, uc008xjx.1_5end |
EntrezGene: | Kcnip4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.54e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.54e-08 | 23 |
neuron | 7.14e-08 | 33 |
neuronal stem cell | 7.14e-08 | 33 |
neuroblast | 7.14e-08 | 33 |
electrically signaling cell | 7.14e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.58e-14 | 73 |
nervous system | 2.57e-13 | 75 |
regional part of nervous system | 1.66e-11 | 54 |
neurectoderm | 1.26e-10 | 64 |
neural plate | 1.26e-10 | 64 |
presumptive neural plate | 1.26e-10 | 64 |
posterior neural tube | 2.19e-10 | 12 |
chordal neural plate | 2.19e-10 | 12 |
neural tube | 1.22e-09 | 52 |
neural rod | 1.22e-09 | 52 |
future spinal cord | 1.22e-09 | 52 |
neural keel | 1.22e-09 | 52 |
ectoderm-derived structure | 1.22e-09 | 95 |
ectoderm | 1.22e-09 | 95 |
presumptive ectoderm | 1.22e-09 | 95 |
organ system subdivision | 1.74e-09 | 194 |
ecto-epithelium | 1.69e-08 | 73 |
regional part of midbrain | 7.39e-08 | 4 |
midbrain | 7.39e-08 | 4 |
presumptive midbrain | 7.39e-08 | 4 |
midbrain neural tube | 7.39e-08 | 4 |
brain | 7.43e-07 | 47 |
future brain | 7.43e-07 | 47 |
spinal cord | 8.49e-07 | 6 |
dorsal region element | 8.49e-07 | 6 |
dorsum | 8.49e-07 | 6 |