FFCP PHASE1:Mm9::chr5:30062442..30062465,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:30062442..30062465,-
|short_description=p1@Gm5129
|description=CAGE_peak_1_at_Gm5129_5end
|association_with_transcript=10bp_to_NR_028426,uc012dtw.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=332993 | |EntrezGene=332993 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_NR_028426,uc012dtw.1_5end | |||
|cluster_id=chr5:30062442..30062465,- | |||
|description=CAGE_peak_1_at_Gm5129_5end | |||
|id=chr5:30062442..30062465,- | |||
|ontology_enrichment_celltype=CL:0000988!1.56e-09!32;CL:0002032!1.56e-09!32;CL:0000037!1.56e-09!32;CL:0000566!1.56e-09!32;CL:0000837!1.56e-09!32;CL:0002031!2.08e-09!25;CL:0000063!1.68e-08!66;CL:0002320!2.24e-07!46;CL:0000134!2.24e-07!46;CL:0000838!3.82e-07!12;CL:0000791!6.69e-07!9;CL:0000789!6.69e-07!9;CL:0002420!6.69e-07!9;CL:0002419!6.69e-07!9;CL:0000790!6.69e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.81e-13,32;CL:0002032,4.81e-13,32;CL:0000037,4.81e-13,32;CL:0000837,4.81e-13,32;CL:0002031,1.08e-11,25;CL:0002320,4.52e-10,46;CL:0000134,4.52e-10,46;CL:0000791,3.69e-09,9;CL:0000789,3.69e-09,9;CL:0002420,3.69e-09,9;CL:0002419,3.69e-09,9;CL:0000790,3.69e-09,9;CL:0000838,3.96e-09,12;CL:0000624,2.78e-08,8;CL:0000084,3.45e-08,11;CL:0000827,3.45e-08,11;CL:0000542,4.18e-08,13;CL:0000051,4.18e-08,13;CL:0000219,1.02e-07,54;CL:0000738,1.48e-07,17;CL:0002087,1.48e-07,17;CL:0000034,8.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.88e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.24e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.52e-10,46 | |||
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| ||
|short_description=p1@Gm5129 | |||
}} | }} |
Latest revision as of 21:38, 25 September 2015
Short description: | p1@Gm5129 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5129_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 10bp_to_NR_028426, uc012dtw.1_5end |
EntrezGene: | Gm5129 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.81e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.81e-13 | 32 |
hematopoietic stem cell | 4.81e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.81e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 1.08e-11 | 25 |
connective tissue cell | 4.52e-10 | 46 |
mesenchymal cell | 4.52e-10 | 46 |
mature alpha-beta T cell | 3.69e-09 | 9 |
alpha-beta T cell | 3.69e-09 | 9 |
immature T cell | 3.69e-09 | 9 |
mature T cell | 3.69e-09 | 9 |
immature alpha-beta T cell | 3.69e-09 | 9 |
lymphoid lineage restricted progenitor cell | 3.96e-09 | 12 |
CD4-positive, alpha-beta T cell | 2.78e-08 | 8 |
T cell | 3.45e-08 | 11 |
pro-T cell | 3.45e-08 | 11 |
lymphocyte | 4.18e-08 | 13 |
common lymphoid progenitor | 4.18e-08 | 13 |
motile cell | 1.02e-07 | 54 |
leukocyte | 1.48e-07 | 17 |
nongranular leukocyte | 1.48e-07 | 17 |
stem cell | 8.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.52e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.88e-07 | 6 |