FFCP PHASE1:Mm9::chr5:134790507..134790546,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:134790507..134790546,-
|short_description=p1@Gtf2i
|description=CAGE_peak_1_at_Gtf2i_5end
|association_with_transcript=0bp_to_ENSMUST00000173504_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14886 | |EntrezGene=14886 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2171 | |||
|TSSclassifier=NA | |||
|UniProt=G3UYD7 | |UniProt=G3UYD7 | ||
|association_with_transcript=0bp_to_ENSMUST00000173504_5end | |||
|cluster_id=chr5:134790507..134790546,- | |||
|description=CAGE_peak_1_at_Gtf2i_5end | |||
|id=chr5:134790507..134790546,- | |||
|ontology_enrichment_celltype=CL:0000540!2.06e-08!33;CL:0000047!2.06e-08!33;CL:0000031!2.06e-08!33;CL:0000404!2.06e-08!33;CL:0000107!9.32e-07!9;CL:0000221!9.95e-07!44;CL:0000133!9.95e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.05e-08,33;CL:0000047,2.05e-08,33;CL:0000031,2.05e-08,33;CL:0000404,2.05e-08,33;CL:0000107,9.29e-07,9;CL:0000221,9.91e-07,44;CL:0000133,9.91e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.67e-13!73;UBERON:0005743!2.67e-13!73;UBERON:0004121!4.29e-13!102;UBERON:0000924!4.29e-13!102;UBERON:0006601!4.29e-13!102;UBERON:0000073!4.04e-12!75;UBERON:0001016!4.04e-12!75;UBERON:0002346!1.74e-10!71;UBERON:0003075!1.74e-10!71;UBERON:0007284!1.74e-10!71;UBERON:0003056!1.44e-09!49;UBERON:0000033!1.12e-08!63;UBERON:0002780!1.45e-08!39;UBERON:0001890!1.45e-08!39;UBERON:0006240!1.45e-08!39;UBERON:0000468!1.74e-08!333;UBERON:0003080!2.12e-08!40;UBERON:0000153!1.24e-07!94;UBERON:0000955!1.26e-07!50;UBERON:0006238!1.26e-07!50;UBERON:0000922!1.51e-07!328;UBERON:0002616!3.53e-07!49;UBERON:0001049!4.17e-07!52;UBERON:0005068!4.17e-07!52;UBERON:0006241!4.17e-07!52;UBERON:0007135!4.17e-07!52;UBERON:0000479!5.95e-07!349;UBERON:0002410!9.32e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.65e-13,73;UBERON:0001016,4.01e-12,75;UBERON:0004121,4.43e-12,95;UBERON:0000924,4.43e-12,95;UBERON:0006601,4.43e-12,95;UBERON:0010314,5.67e-10,92;UBERON:0002346,1.25e-09,64;UBERON:0003075,1.25e-09,64;UBERON:0007284,1.25e-09,64;UBERON:0003056,1.43e-09,49;UBERON:0010371,2.39e-09,73;UBERON:0002780,1.45e-08,39;UBERON:0001890,1.45e-08,39;UBERON:0006240,1.45e-08,39;UBERON:0000922,1.64e-08,320;UBERON:0003080,2.11e-08,40;UBERON:0000955,1.21e-07,47;UBERON:0006238,1.21e-07,47;UBERON:0000073,3.19e-07,54;UBERON:0002616,3.44e-07,46;UBERON:0001049,4.15e-07,52;UBERON:0005068,4.15e-07,52;UBERON:0006241,4.15e-07,52;UBERON:0007135,4.15e-07,52;UBERON:0000479,7.68e-07,349;UBERON:0002410,9.29e-07,9 | |||
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| ||
|short_description=p1@Gtf2i | |||
}} | }} |
Latest revision as of 23:39, 1 October 2015
Short description: | p1@Gtf2i |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gtf2i_5end |
Coexpression cluster: | MCL_coexpression_mm9:2171 |
Association with transcript: | 0bp_to_ENSMUST00000173504_5end |
EntrezGene: | Gtf2i |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.05e-08 | 33 |
neuronal stem cell | 2.05e-08 | 33 |
neuroblast | 2.05e-08 | 33 |
electrically signaling cell | 2.05e-08 | 33 |
autonomic neuron | 9.29e-07 | 9 |
ectodermal cell | 9.91e-07 | 44 |
neurectodermal cell | 9.91e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.65e-13 | 73 |
nervous system | 4.01e-12 | 75 |
ectoderm-derived structure | 4.43e-12 | 95 |
ectoderm | 4.43e-12 | 95 |
presumptive ectoderm | 4.43e-12 | 95 |
structure with developmental contribution from neural crest | 5.67e-10 | 92 |
neurectoderm | 1.25e-09 | 64 |
neural plate | 1.25e-09 | 64 |
presumptive neural plate | 1.25e-09 | 64 |
pre-chordal neural plate | 1.43e-09 | 49 |
ecto-epithelium | 2.39e-09 | 73 |
regional part of forebrain | 1.45e-08 | 39 |
forebrain | 1.45e-08 | 39 |
future forebrain | 1.45e-08 | 39 |
embryo | 1.64e-08 | 320 |
anterior neural tube | 2.11e-08 | 40 |
brain | 1.21e-07 | 47 |
future brain | 1.21e-07 | 47 |
regional part of nervous system | 3.19e-07 | 54 |
regional part of brain | 3.44e-07 | 46 |
neural tube | 4.15e-07 | 52 |
neural rod | 4.15e-07 | 52 |
future spinal cord | 4.15e-07 | 52 |
neural keel | 4.15e-07 | 52 |
tissue | 7.68e-07 | 349 |
autonomic nervous system | 9.29e-07 | 9 |