FFCP PHASE1:Mm9::chr5:134790428..134790441,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:134790428..134790441,-
|short_description=p5@Gtf2i
|description=CAGE_peak_5_at_Gtf2i_5end
|association_with_transcript=104bp_to_ENSMUST00000173504_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14886 | |EntrezGene=14886 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=G3UYD7 | |UniProt=G3UYD7 | ||
|association_with_transcript=104bp_to_ENSMUST00000173504_5end | |||
|cluster_id=chr5:134790428..134790441,- | |||
|description=CAGE_peak_5_at_Gtf2i_5end | |||
|id=chr5:134790428..134790441,- | |||
|ontology_enrichment_celltype=CL:0000540!2.15e-09!33;CL:0000047!2.15e-09!33;CL:0000031!2.15e-09!33;CL:0000404!2.15e-09!33;CL:0000221!2.05e-08!44;CL:0000133!2.05e-08!44;CL:0002319!2.65e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.04e-09,33;CL:0000047,2.04e-09,33;CL:0000031,2.04e-09,33;CL:0000404,2.04e-09,33;CL:0000221,2.15e-08,44;CL:0000133,2.15e-08,44;CL:0002319,2.78e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.43e-13!73;UBERON:0005743!3.43e-13!73;UBERON:0004121!4.10e-13!102;UBERON:0000924!4.10e-13!102;UBERON:0006601!4.10e-13!102;UBERON:0000073!3.50e-12!75;UBERON:0001016!3.50e-12!75;UBERON:0000153!9.05e-12!94;UBERON:0007811!1.07e-11!86;UBERON:0000033!4.01e-11!63;UBERON:0002346!1.29e-10!71;UBERON:0003075!1.29e-10!71;UBERON:0007284!1.29e-10!71;UBERON:0000955!3.74e-08!50;UBERON:0006238!3.74e-08!50;UBERON:0002616!6.64e-08!49;UBERON:0003056!8.34e-08!49;UBERON:0001049!5.35e-07!52;UBERON:0005068!5.35e-07!52;UBERON:0006241!5.35e-07!52;UBERON:0007135!5.35e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.67e-13,92;UBERON:0001017,3.18e-13,73;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0001016,3.57e-12,75;UBERON:0002346,2.08e-10,64;UBERON:0003075,2.08e-10,64;UBERON:0007284,2.08e-10,64;UBERON:0010371,5.73e-09,73;UBERON:0000073,3.33e-08,54;UBERON:0003056,8.00e-08,49;UBERON:0000955,3.50e-07,47;UBERON:0006238,3.50e-07,47;UBERON:0001049,5.16e-07,52;UBERON:0005068,5.16e-07,52;UBERON:0006241,5.16e-07,52;UBERON:0007135,5.16e-07,52;UBERON:0002616,6.10e-07,46 | |||
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| ||
|short_description=p5@Gtf2i | |||
}} | }} |
Latest revision as of 23:38, 1 October 2015
Short description: | p5@Gtf2i |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gtf2i_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 104bp_to_ENSMUST00000173504_5end |
EntrezGene: | Gtf2i |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.04e-09 | 33 |
neuronal stem cell | 2.04e-09 | 33 |
neuroblast | 2.04e-09 | 33 |
electrically signaling cell | 2.04e-09 | 33 |
ectodermal cell | 2.15e-08 | 44 |
neurectodermal cell | 2.15e-08 | 44 |
neural cell | 2.78e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.67e-13 | 92 |
central nervous system | 3.18e-13 | 73 |
ectoderm-derived structure | 1.31e-12 | 95 |
ectoderm | 1.31e-12 | 95 |
presumptive ectoderm | 1.31e-12 | 95 |
nervous system | 3.57e-12 | 75 |
neurectoderm | 2.08e-10 | 64 |
neural plate | 2.08e-10 | 64 |
presumptive neural plate | 2.08e-10 | 64 |
ecto-epithelium | 5.73e-09 | 73 |
regional part of nervous system | 3.33e-08 | 54 |
pre-chordal neural plate | 8.00e-08 | 49 |
brain | 3.50e-07 | 47 |
future brain | 3.50e-07 | 47 |
neural tube | 5.16e-07 | 52 |
neural rod | 5.16e-07 | 52 |
future spinal cord | 5.16e-07 | 52 |
neural keel | 5.16e-07 | 52 |
regional part of brain | 6.10e-07 | 46 |