FFCP PHASE1:Mm9::chr5:112705779..112705790,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:112705779..112705790,+
|short_description=p4@Tpst2
|description=CAGE_peak_4_at_Tpst2_5end
|association_with_transcript=52bp_to_ENSMUST00000071455,ENSMUST00...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22022 | |EntrezGene=22022 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TQN1,O88856 | |UniProt=Q3TQN1,O88856 | ||
|association_with_transcript=52bp_to_ENSMUST00000071455,ENSMUST00000112373,NM_009419,uc008ysw.2,uc008ysx.2,uc012ebg.1_5end | |||
|cluster_id=chr5:112705779..112705790,+ | |||
|description=CAGE_peak_4_at_Tpst2_5end | |||
|id=chr5:112705779..112705790,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.13e-08,9;CL:0000222,9.06e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,3.38e-09,45;UBERON:0001134,2.13e-08,9;UBERON:0002036,2.13e-08,9;UBERON:0002385,2.13e-08,9;UBERON:0000486,2.13e-08,9;UBERON:0007503,2.13e-08,9;UBERON:0001015,2.13e-08,9;UBERON:0002329,2.13e-08,9;UBERON:0003082,2.13e-08,9;UBERON:0003059,2.13e-08,9;UBERON:0007282,2.13e-08,9;UBERON:0004290,2.13e-08,9;UBERON:0009618,2.13e-08,9;UBERON:0000383,2.05e-07,10;UBERON:0003104,5.21e-07,61;UBERON:0009142,5.21e-07,61 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,1.20985684522732,0.500895729946347,0.503637815735669,0.467225281191051,0.774739940649458,1.40788722151667,2.10658073689794,0.513653904676515,0.398860794976682,1.02720437958723,0.961624426608971,1.33243904726265,0.404950534779652,0,0.630924330716475,1.37114433605739,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0,3.17515336729816,1.84519436275371,0,0.577703239502549,0.166234645358492,0.408338712524738,1.25559489221072,1.5626706890476,1.0470474879476,2.35292595212406,2.73218193983378,0.971020706062307,1.88845226963366,1.01376931219515,0.734187008646726,0.782391344348039,1.52617609466313,0.878744730937887,1.74986909166855,0.839918529752175,0,1.34226084846189,0.725362142011344,2.01656279485478,1.54355661621568,1.43266719969378,1.03134418455488,0,0.528990979272033,0,0.677689064138264,1.77858959222228,1.7997994345628,0.988866362566974,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0.56276261003168,0.61119299110724,0,0,0.186399445825301,0.075726193333184,0.453429360640713,2.02905142091174,0.860423876981386,0,2.15881276655127,1.29955283489534,0.896053774194671,0.842666520790511,1.53387290320252,0.259786004602869,0.70667914902068,0,1.28326477414318,2.54805239706646,0,0,0,0,1.7127581957859,2.33044095282455,6.23456984072264,0.346970653532272,0.608930956624282,0.922461989024234,1.50722640552623,1.17588707135705,4.27266410520897,0.741584903203122,1.44599356919912,3.5384422077995,0.323533699894818,0.883366073841574,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0.479260498023681,0,0.381210681219194,0.599162557619291,1.83000241127451,0,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,1.8661045591514,6.31806896084187,0.841767423545896,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0.702213187313235,1.02939162845886,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.656669856316381,0.891756905004413,0.730999937126662,1.09775057645525,0.536825675041487,0.420579897128254,0.308713837137853,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,1.22190796707189,0.387904974335251,0.210407459670956,0.316182685621286,0.442830443938806,0.470996183524124,0.123397163921801,0.889357881261447,0.333690211432188,0.786235980452812,0.674586337154561,0.405720242777006,0,0.50925170356284,2.01387296215567,0.162135226775035,0.823684239564244,1.43768206527355,0,0.312037673114561,1.26289438973556,0.538192240565737,1.4473305640901,1.10851914099963,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.81931657357869,0.518054945597687,0.867894351489069,0,0.54390568381871,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.491804836130026,0.504941854408746,0.94652465824877,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,5.96148357874728,0.35613120733451,0,1.15479086080775,2.65490276679926,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0.307435147943927,1.29214146584111,0.363533729477506,0.712994756769443,1.26414703174326,0,2.06271086496374,2.04263763452273,0.36012218806262,0.129358683782755,0,0.354680467284547,0.356737635204141,0.329098041204242,0.913394847343798,0,0.63549621259146,0,0.65954501176592,0.484393280087717,0.301564624640779,0.358117032009409,0.328281799490123,0.582961673259701,0.18542530201051,1.70870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0.956859594047176,0.228778173206523,1.01987057996313,0.979660166265606,0.138199973804424,0,0.158167996790568,0.813277868507395,0.108005340821801,0.627264888043406,0.655087691238533,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.781226309063701,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0.39736270956253,0,0.443068581523732,0.302899349844443,0,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.335769232728157,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.749132059759059,0.256100609619477,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0.412085900803307,0.147198920134397,0,0.354951612318675,1.1921809497366,0.726732083161643,0.282328141245992,0.169229215783353,0.914639864363863,0.263069711437843,0.407412341537585,1.12228454331548,0.118635018124174,0.197008964751127,0,0.619747364743864,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0.480446541314382,0,0.454999239389536,1.20985684522732,0.500895729946347,0.503637815735669,0.467225281191051,0.774739940649458,1.40788722151667,2.10658073689794,0.513653904676515,0.398860794976682,1.02720437958723,0.961624426608971,1.33243904726265,0.404950534779652,0,0.630924330716475,1.37114433605739,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0.639969691173627,0.91763712426868,0,0,0.215471232685889,0,0.252030129759931,0,3.17515336729816,1.84519436275371,0,0.577703239502549,0.166234645358492,0.408338712524738,1.25559489221072,1.5626706890476,1.0470474879476,2.35292595212406,2.73218193983378,0.971020706062307,1.88845226963366,1.01376931219515,0.734187008646726,0.782391344348039,1.52617609466313,0.878744730937887,1.74986909166855,0.839918529752175,0,1.34226084846189,0.725362142011344,2.01656279485478,1.54355661621568,1.43266719969378,1.03134418455488,0,0.528990979272033,0,0.677689064138264,1.77858959222228,1.7997994345628,0.988866362566974,2.1314403448383,0.898800331555214,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0.56276261003168,0.61119299110724,0,0,0.186399445825301,0.075726193333184,0.453429360640713,2.02905142091174,0.860423876981386,0,2.15881276655127,1.29955283489534,0.896053774194671,0.842666520790511,1.53387290320252,0.259786004602869,0.70667914902068,0,1.28326477414318,2.54805239706646,0,0,0,0,1.7127581957859,2.33044095282455,6.23456984072264,0.346970653532272,0.608930956624282,0.922461989024234,1.50722640552623,1.17588707135705,4.27266410520897,0.741584903203122,1.44599356919912,3.5384422077995,0.323533699894818,0.883366073841574,0.484875253135222,0,1.46390398505774,0.41889341362691,0,0.479260498023681,0,0.381210681219194,0.599162557619291,1.83000241127451,0,0.173824320192276,0.255715457330331,0.83115217823824,0.324482526135515,0,1.8661045591514,6.31806896084187,0.841767423545896,0,0,0.180062129805349,0,0.136072998302656,0.384341160854549,0,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.556094498451196,0.696504333044333,0.61734640922383,0.398068533636986,0.702213187313235,1.02939162845886,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0.329119699826961,0.656669856316381,0.891756905004413,0.730999937126662,1.09775057645525,0.536825675041487,0.420579897128254,0.308713837137853,0,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,0,1.22190796707189,0.387904974335251,0.210407459670956,0.316182685621286,0.442830443938806,0.470996183524124,0.123397163921801,0.889357881261447,0.333690211432188,0.786235980452812,0.674586337154561,0.405720242777006,0,0.50925170356284,2.01387296215567,0.162135226775035,0.823684239564244,1.43768206527355,0,0.312037673114561,1.26289438973556,0.538192240565737,1.4473305640901,1.10851914099963,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0,0.159454768657487,0.81931657357869,0.518054945597687,0.867894351489069,0,0.54390568381871,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.491804836130026,0.504941854408746,0.94652465824877,0.780877488593277,0.646270193198397,0.716906393857656,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,0.321321316421807,5.96148357874728,0.35613120733451,0,1.15479086080775,2.65490276679926,0.242780636154981,0.302323556964751,0.377210159511796,1.18120757152309,0.307435147943927,1.29214146584111,0.363533729477506,0.712994756769443,1.26414703174326,0,2.06271086496374,2.04263763452273,0.36012218806262,0.129358683782755,0,0.354680467284547,0.356737635204141,0.329098041204242,0.913394847343798,0,0.63549621259146,0,0.65954501176592,0.484393280087717,0.301564624640779,0.358117032009409,0.328281799490123,0.582961673259701,0.18542530201051,1.70870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0.956859594047176,0.228778173206523,1.01987057996313,0.979660166265606,0.138199973804424,0,0.158167996790568,0.813277868507395,0.108005340821801,0.627264888043406,0.655087691238533,0,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0.781226309063701,0.104859344425711,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0.39736270956253,0,0.443068581523732,0.302899349844443,0,0.100826185136841,0.292373642219257,0.288635524920988,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0.335769232728157,0.579568782096571,0.187682475451182,0.915758121336325,0.214368379079066,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,0,0.207574695168353,0,0,0,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0.377252682772152,0.749132059759059,0.256100609619477,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0.412085900803307,0.147198920134397,0,0.354951612318675,1.1921809497366,0.726732083161643,0.282328141245992,0.169229215783353,0.914639864363863,0.263069711437843,0.407412341537585,1.12228454331548,0.118635018124174,0.197008964751127,0,0.619747364743864,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p4@Tpst2 | |||
}} | }} |
Latest revision as of 15:44, 1 October 2015
Short description: | p4@Tpst2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tpst2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENSMUST00000071455, ENSMUST00000112373, NM_009419, uc008ysw.2, uc008ysx.2, uc012ebg.1_5end |
EntrezGene: | Tpst2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.13e-08 | 9 |
mesodermal cell | 9.06e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 3.38e-09 | 45 |
skeletal muscle tissue | 2.13e-08 | 9 |
striated muscle tissue | 2.13e-08 | 9 |
muscle tissue | 2.13e-08 | 9 |
multilaminar epithelium | 2.13e-08 | 9 |
epithelial vesicle | 2.13e-08 | 9 |
musculature | 2.13e-08 | 9 |
somite | 2.13e-08 | 9 |
myotome | 2.13e-08 | 9 |
presomitic mesoderm | 2.13e-08 | 9 |
presumptive segmental plate | 2.13e-08 | 9 |
dermomyotome | 2.13e-08 | 9 |
trunk paraxial mesoderm | 2.13e-08 | 9 |
musculature of body | 2.05e-07 | 10 |
mesenchyme | 5.21e-07 | 61 |
entire embryonic mesenchyme | 5.21e-07 | 61 |